Click here to switch to the map view.

The map label for this gene is yulF [H]

Identifier: 18310227

GI number: 18310227

Start: 1451269

End: 1452240

Strand: Reverse

Name: yulF [H]

Synonym: CPE1245

Alternate gene names: 18310227

Gene position: 1452240-1451269 (Counterclockwise)

Preceding gene: 18310229

Following gene: 18310226

Centisome position: 47.91

GC content: 30.56

Gene sequence:

>972_bases
ATGAAAAAACTTAAATGGGGAATATTAGGACCAGGAAATATAGCTAGAGATTTTGCACAAGCTTTAAATAGGGTTAATGG
AGAGGTTTATGCAGTAGCTTCTAGAAATAAGGAAAGAGCAGAGAAATTTGCAAGAGAAAATAATGTTAAAAAAGCTTATG
GAAGCTATGATGAGATTATAAAAGACAAGGATATAGATGTAGTGTATATAGCAACACCACACAGTAATCATTATGAGTAC
ATTATAAAAAGTTTAAATAATAATAAACATGTTCTATGTGAAAAGGCTATAACTGTAAATGAAAGAGAGTTAGAAGAAGC
CTTAAAAATAGCAAGAGAGAAAAACTTAGTTTTAGAAGAGGCAATGACCTTATTTCATATGCCCTTATATGAAAAGGTTA
TAAAGAAGATAAATAAGAAAGACTTAGGAAAAGTGAATATGGTTCAAGTTTCCTTTGGAAGCTTCAAGGAATATGATGAA
AATAACAGATTCTTTAATCTTGATTTAGCTGGAGGAGCATTATTAGATATTGGAACTTATGCTTTATCTTTTGCAAGATA
TTTCTTATCTAGTATGCCAGAGGAAATCTTAAGTACAGTTAAGAAGGCTAAAACTGGTGTAGATGAAGAGTCTGGAATAA
TATTAAAGACAAAGGAAGATGAAATTGCAACTATATGCCTAGCCTTTAGATCTAAAATGCCTAAGAGAGGAATTGTTTCT
TGTGACAATGGATTTATAACAATTGATAATTTCCCAAGAGCTAATAAGGCAACCATAAACTACTTAGATGGTGCAGTAGA
AGTTATAGAGTGTGGAGAAGAGGAAAAGGCCTTAGATTATGAAGTTATCTTTATGGAAGAGAGAATAAAGGAAAATAAAG
AATCTAATAGTATAGAACTAACTTATGATGTTACAAAAATTATGAATAAGGTTAGAAAAGACTGGGGAATTCTTTATCCC
TTTGAAAAATAA

Upstream 100 bases:

>100_bases
AAAATTTATAATTTAGTTTAAAATAATTTTTGCTTTAAGTGGATTATTAGTTTAAAATAAGCTTAAATAATATACTTTAT
ATTAAAGAGGAGCTGAGAAT

Downstream 100 bases:

>100_bases
TTAAAGTTTTATAAAAGATTAAGCTTTATAATAGCTTTAATATTAAAAAATAATATATGAAATTAAAAGTCACCTAAAGA
GTATAATGTATTATTAATAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 323; Mature: 323

Protein sequence:

>323_residues
MKKLKWGILGPGNIARDFAQALNRVNGEVYAVASRNKERAEKFARENNVKKAYGSYDEIIKDKDIDVVYIATPHSNHYEY
IIKSLNNNKHVLCEKAITVNERELEEALKIAREKNLVLEEAMTLFHMPLYEKVIKKINKKDLGKVNMVQVSFGSFKEYDE
NNRFFNLDLAGGALLDIGTYALSFARYFLSSMPEEILSTVKKAKTGVDEESGIILKTKEDEIATICLAFRSKMPKRGIVS
CDNGFITIDNFPRANKATINYLDGAVEVIECGEEEKALDYEVIFMEERIKENKESNSIELTYDVTKIMNKVRKDWGILYP
FEK

Sequences:

>Translated_323_residues
MKKLKWGILGPGNIARDFAQALNRVNGEVYAVASRNKERAEKFARENNVKKAYGSYDEIIKDKDIDVVYIATPHSNHYEY
IIKSLNNNKHVLCEKAITVNERELEEALKIAREKNLVLEEAMTLFHMPLYEKVIKKINKKDLGKVNMVQVSFGSFKEYDE
NNRFFNLDLAGGALLDIGTYALSFARYFLSSMPEEILSTVKKAKTGVDEESGIILKTKEDEIATICLAFRSKMPKRGIVS
CDNGFITIDNFPRANKATINYLDGAVEVIECGEEEKALDYEVIFMEERIKENKESNSIELTYDVTKIMNKVRKDWGILYP
FEK
>Mature_323_residues
MKKLKWGILGPGNIARDFAQALNRVNGEVYAVASRNKERAEKFARENNVKKAYGSYDEIIKDKDIDVVYIATPHSNHYEY
IIKSLNNNKHVLCEKAITVNERELEEALKIAREKNLVLEEAMTLFHMPLYEKVIKKINKKDLGKVNMVQVSFGSFKEYDE
NNRFFNLDLAGGALLDIGTYALSFARYFLSSMPEEILSTVKKAKTGVDEESGIILKTKEDEIATICLAFRSKMPKRGIVS
CDNGFITIDNFPRANKATINYLDGAVEVIECGEEEKALDYEVIFMEERIKENKESNSIELTYDVTKIMNKVRKDWGILYP
FEK

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Homo sapiens, GI7657212, Length=344, Percent_Identity=30.2325581395349, Blast_Score=144, Evalue=8e-35,
Organism=Escherichia coli, GI145693182, Length=324, Percent_Identity=23.7654320987654, Blast_Score=97, Evalue=1e-21,
Organism=Drosophila melanogaster, GI24581117, Length=258, Percent_Identity=32.5581395348837, Blast_Score=147, Evalue=9e-36,
Organism=Drosophila melanogaster, GI24581115, Length=199, Percent_Identity=29.6482412060301, Blast_Score=104, Evalue=7e-23,
Organism=Drosophila melanogaster, GI24584727, Length=251, Percent_Identity=26.6932270916335, Blast_Score=102, Evalue=4e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 36972; Mature: 36972

Theoretical pI: Translated: 6.55; Mature: 6.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLKWGILGPGNIARDFAQALNRVNGEVYAVASRNKERAEKFARENNVKKAYGSYDEII
CCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCCCHHHHCCHHHHH
KDKDIDVVYIATPHSNHYEYIIKSLNNNKHVLCEKAITVNERELEEALKIAREKNLVLEE
CCCCCCEEEEECCCCCHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCHHHHH
AMTLFHMPLYEKVIKKINKKDLGKVNMVQVSFGSFKEYDENNRFFNLDLAGGALLDIGTY
HHHHHHCHHHHHHHHHHCHHCCCCEEEEEEECCCCHHHCCCCCEEEEEECCCHHHHHHHH
ALSFARYFLSSMPEEILSTVKKAKTGVDEESGIILKTKEDEIATICLAFRSKMPKRGIVS
HHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHCCCCCCCEE
CDNGFITIDNFPRANKATINYLDGAVEVIECGEEEKALDYEVIFMEERIKENKESNSIEL
ECCCEEEECCCCCCCCCEEEHHHHHHHHHHCCCCCCCCCEEEEEEHHHHHCCCCCCCEEE
TYDVTKIMNKVRKDWGILYPFEK
EEHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MKKLKWGILGPGNIARDFAQALNRVNGEVYAVASRNKERAEKFARENNVKKAYGSYDEII
CCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCCCHHHHCCHHHHH
KDKDIDVVYIATPHSNHYEYIIKSLNNNKHVLCEKAITVNERELEEALKIAREKNLVLEE
CCCCCCEEEEECCCCCHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCHHHHH
AMTLFHMPLYEKVIKKINKKDLGKVNMVQVSFGSFKEYDENNRFFNLDLAGGALLDIGTY
HHHHHHCHHHHHHHHHHCHHCCCCEEEEEEECCCCHHHCCCCCEEEEEECCCHHHHHHHH
ALSFARYFLSSMPEEILSTVKKAKTGVDEESGIILKTKEDEIATICLAFRSKMPKRGIVS
HHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHCCCCCCCEE
CDNGFITIDNFPRANKATINYLDGAVEVIECGEEEKALDYEVIFMEERIKENKESNSIEL
ECCCEEEECCCCCCCCCEEEHHHHHHHHHHCCCCCCCCCEEEEEEHHHHHCCCCCCCEEE
TYDVTKIMNKVRKDWGILYPFEK
EEHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9274030; 9384377 [H]