| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is 18310222
Identifier: 18310222
GI number: 18310222
Start: 1447152
End: 1448489
Strand: Reverse
Name: 18310222
Synonym: CPE1240
Alternate gene names: NA
Gene position: 1448489-1447152 (Counterclockwise)
Preceding gene: 18310223
Following gene: 18310221
Centisome position: 47.78
GC content: 31.32
Gene sequence:
>1338_bases ATGAATAAAAGAATAACAAAAGAAAAGCTAAAGGATATTTTAGCTAAATATCCAAGTAATAAATTTGATTCTCTAGATGA TATACATCCAGCTGATATAGTGGATTTGTTAGAGGAGAATGAGGAAAATATTAAGCTTATAAAAAAACTTCCAGAAAATA TGATTGCAGATATTATAGATTTTGCGAAGGATGATGACAAGGTAAATATATTAAAAAGTTTACCTGAAGAAAAGAAGAAG AAGGTTTTAAATTTAATAGCTTCAGATGAACTTACAGACCTTATGGCAAGCTTAAATCGTGAAGAAACTAGTAAATTACT TTCAAGTATGCCAGTTCAAGATGCTAAGGATTTAAGAAAATTATTAACATATGCACCAGATACAGCTGGTGGTGTTATGG CCACAGAGTTTATTTCTATAAAGGATACCATGAGTGTAAAAGAAACCTTAGAGTACCTTCAATTAGAAGCTCCAAAGGCT GAATCAGCTTATTACATATATGTTGTAGATGACTTAGGAATATTACAAGGGGTAGTTTCTTTAAGAGAACTTGTAATAAG TAAGTTTGACGAAAAAATTTCAGAGATTGTGAATAAAAACGTCATAAGTGTTCCTTTTGATATGGACCAAGAAGAGGTTG CAAATATATTTGATAAATATGGACTTTTAACAATACCAGTTGTTGATTACAAAGATATGCTTTTAGGTATAATAACAATT GATGATGTTATTGAAATTATAAAAGAAGAAACAACAGAAGATATACACCGTCTAGGTGGTGTAGATGGAGAAGAAAAAGT TGATAGTACAGTAAAAGAATCTGTAAAAAGTAGATTACCATGGTTATTTGTTAACCTAATAACTGCTTTCTTAGCTTCTG CCACTGTTGGACTTTTTGAAGGAACTATTAGCAAGGTTGTAATTTTAGCTACATTTATGCCTATTGTTGCAGGTATGGGT GGAAATGGAGGAACTCAAACCTTAACAATTATAGTAAGAGGTATAGCCTTAGGAGAATTAACTTTTAAAAATGCAAAGAG AATTTTCTTTAAGGAAATTGGAGTTGGTATTTTAACAGGGGCTGCCACTGGATTAGTAACTGCAATAGTTGCTGTTTTAT GGTCAGGAAAACCTGCAATTGGAATAGTAATAGGATTAGCTATGATATTAAATATGACTGCTGCTACCTTTGCAGGATAT TTAGTACCAGTTGTTTTAAAGAAATTAAAAATAGATCCAGCTTTAGCTTCTGCCGTGTTTGTTACAACAGTAACTGATGT ATGTGGATTTTTCTTCTTCTTAGGTTTAGGAACTTTATTCTTACCATATTTAACTTAG
Upstream 100 bases:
>100_bases AATTAAAAATAAGAGGAATAGTACATTTATATACCTTTAATGAGCAAATTATCCTATAGATAGTTATTATTCCTCTTATT TAAGGAAGAGAGGAAATGAT
Downstream 100 bases:
>100_bases ATTATTATTTTTATTAAGAGGGTGGAATTAATGAAGAAGAGTTTTAGAAGTAAAAACATTTTATTAGTGGTAATTTTAGC ACTTTTAGTATTTGTAGGAG
Product: magnesium transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 445; Mature: 445
Protein sequence:
>445_residues MNKRITKEKLKDILAKYPSNKFDSLDDIHPADIVDLLEENEENIKLIKKLPENMIADIIDFAKDDDKVNILKSLPEEKKK KVLNLIASDELTDLMASLNREETSKLLSSMPVQDAKDLRKLLTYAPDTAGGVMATEFISIKDTMSVKETLEYLQLEAPKA ESAYYIYVVDDLGILQGVVSLRELVISKFDEKISEIVNKNVISVPFDMDQEEVANIFDKYGLLTIPVVDYKDMLLGIITI DDVIEIIKEETTEDIHRLGGVDGEEKVDSTVKESVKSRLPWLFVNLITAFLASATVGLFEGTISKVVILATFMPIVAGMG GNGGTQTLTIIVRGIALGELTFKNAKRIFFKEIGVGILTGAATGLVTAIVAVLWSGKPAIGIVIGLAMILNMTAATFAGY LVPVVLKKLKIDPALASAVFVTTVTDVCGFFFFLGLGTLFLPYLT
Sequences:
>Translated_445_residues MNKRITKEKLKDILAKYPSNKFDSLDDIHPADIVDLLEENEENIKLIKKLPENMIADIIDFAKDDDKVNILKSLPEEKKK KVLNLIASDELTDLMASLNREETSKLLSSMPVQDAKDLRKLLTYAPDTAGGVMATEFISIKDTMSVKETLEYLQLEAPKA ESAYYIYVVDDLGILQGVVSLRELVISKFDEKISEIVNKNVISVPFDMDQEEVANIFDKYGLLTIPVVDYKDMLLGIITI DDVIEIIKEETTEDIHRLGGVDGEEKVDSTVKESVKSRLPWLFVNLITAFLASATVGLFEGTISKVVILATFMPIVAGMG GNGGTQTLTIIVRGIALGELTFKNAKRIFFKEIGVGILTGAATGLVTAIVAVLWSGKPAIGIVIGLAMILNMTAATFAGY LVPVVLKKLKIDPALASAVFVTTVTDVCGFFFFLGLGTLFLPYLT >Mature_445_residues MNKRITKEKLKDILAKYPSNKFDSLDDIHPADIVDLLEENEENIKLIKKLPENMIADIIDFAKDDDKVNILKSLPEEKKK KVLNLIASDELTDLMASLNREETSKLLSSMPVQDAKDLRKLLTYAPDTAGGVMATEFISIKDTMSVKETLEYLQLEAPKA ESAYYIYVVDDLGILQGVVSLRELVISKFDEKISEIVNKNVISVPFDMDQEEVANIFDKYGLLTIPVVDYKDMLLGIITI DDVIEIIKEETTEDIHRLGGVDGEEKVDSTVKESVKSRLPWLFVNLITAFLASATVGLFEGTISKVVILATFMPIVAGMG GNGGTQTLTIIVRGIALGELTFKNAKRIFFKEIGVGILTGAATGLVTAIVAVLWSGKPAIGIVIGLAMILNMTAATFAGY LVPVVLKKLKIDPALASAVFVTTVTDVCGFFFFLGLGTLFLPYLT
Specific function: Acts as a magnesium transporter [H]
COG id: COG2239
COG function: function code P; Mg/Co/Ni transporter MgtE (contains CBS domain)
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 CBS domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR000644 - InterPro: IPR006668 - InterPro: IPR006667 - InterPro: IPR006669 [H]
Pfam domain/function: PF00571 CBS; PF01769 MgtE; PF03448 MgtE_N [H]
EC number: NA
Molecular weight: Translated: 48766; Mature: 48766
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKRITKEKLKDILAKYPSNKFDSLDDIHPADIVDLLEENEENIKLIKKLPENMIADIID CCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH FAKDDDKVNILKSLPEEKKKKVLNLIASDELTDLMASLNREETSKLLSSMPVQDAKDLRK HHCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCHHHHHH LLTYAPDTAGGVMATEFISIKDTMSVKETLEYLQLEAPKAESAYYIYVVDDLGILQGVVS HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCHHHHHHHHH LRELVISKFDEKISEIVNKNVISVPFDMDQEEVANIFDKYGLLTIPVVDYKDMLLGIITI HHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHCCCEEEEEECHHHHHHHHHHH DDVIEIIKEETTEDIHRLGGVDGEEKVDSTVKESVKSRLPWLFVNLITAFLASATVGLFE HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH GTISKVVILATFMPIVAGMGGNGGTQTLTIIVRGIALGELTFKNAKRIFFKEIGVGILTG HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH AATGLVTAIVAVLWSGKPAIGIVIGLAMILNMTAATFAGYLVPVVLKKLKIDPALASAVF HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH VTTVTDVCGFFFFLGLGTLFLPYLT HHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNKRITKEKLKDILAKYPSNKFDSLDDIHPADIVDLLEENEENIKLIKKLPENMIADIID CCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH FAKDDDKVNILKSLPEEKKKKVLNLIASDELTDLMASLNREETSKLLSSMPVQDAKDLRK HHCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCHHHHHH LLTYAPDTAGGVMATEFISIKDTMSVKETLEYLQLEAPKAESAYYIYVVDDLGILQGVVS HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCHHHHHHHHH LRELVISKFDEKISEIVNKNVISVPFDMDQEEVANIFDKYGLLTIPVVDYKDMLLGIITI HHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHCCCEEEEEECHHHHHHHHHHH DDVIEIIKEETTEDIHRLGGVDGEEKVDSTVKESVKSRLPWLFVNLITAFLASATVGLFE HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH GTISKVVILATFMPIVAGMGGNGGTQTLTIIVRGIALGELTFKNAKRIFFKEIGVGILTG HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH AATGLVTAIVAVLWSGKPAIGIVIGLAMILNMTAATFAGYLVPVVLKKLKIDPALASAVF HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH VTTVTDVCGFFFFLGLGTLFLPYLT HHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA