| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is yneP [H]
Identifier: 18310196
GI number: 18310196
Start: 1419709
End: 1419942
Strand: Reverse
Name: yneP [H]
Synonym: CPE1214
Alternate gene names: 18310196
Gene position: 1419942-1419709 (Counterclockwise)
Preceding gene: 18310197
Following gene: 18310195
Centisome position: 46.84
GC content: 29.06
Gene sequence:
>234_bases ATGAAAAGTATAAGCAAAATTAAAGTAAGATATGCTGAAACAGATGCAATGCAGGTTGTACATCATGCCAATTATTATAT ATATTTTGAAGTTGCAAGAGAAGATTTTATAGAACAATTTGGAATTACATATAAGGAAATGGAAGATCAAGGGATTATGA TGCCTTTAGTAGAGACTCAATGTAAATATATAGATGCAGCAAGATATGGAGATAACTTACATAATAGAAACTGA
Upstream 100 bases:
>100_bases ATTTTAGTTAGATATAAATATTTATAAAAGGTTTGAAAATCAAAATAAAATAATATAAAATTACAATATGAAAATAAGTT TTTTATAAGGAGTATTTTAT
Downstream 100 bases:
>100_bases GTATGATGAAATAACACCTATTAAGGTTTCATTAAAATACACAGTAAAAAGAGAAAATCATAATAAGCTTGTAGCTACAG GCAAAACTTTACAAACTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 77; Mature: 77
Protein sequence:
>77_residues MKSISKIKVRYAETDAMQVVHHANYYIYFEVAREDFIEQFGITYKEMEDQGIMMPLVETQCKYIDAARYGDNLHNRN
Sequences:
>Translated_77_residues MKSISKIKVRYAETDAMQVVHHANYYIYFEVAREDFIEQFGITYKEMEDQGIMMPLVETQCKYIDAARYGDNLHNRN >Mature_77_residues MKSISKIKVRYAETDAMQVVHHANYYIYFEVAREDFIEQFGITYKEMEDQGIMMPLVETQCKYIDAARYGDNLHNRN
Specific function: Unknown
COG id: COG0824
COG function: function code R; Predicted thioesterase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 4-hydroxybenzoyl-CoA thioesterase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006684 - InterPro: IPR006683 [H]
Pfam domain/function: PF03061 4HBT [H]
EC number: NA
Molecular weight: Translated: 9173; Mature: 9173
Theoretical pI: Translated: 5.59; Mature: 5.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 6.5 %Met (Translated Protein) 7.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 6.5 %Met (Mature Protein) 7.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSISKIKVRYAETDAMQVVHHANYYIYFEVAREDFIEQFGITYKEMEDQGIMMPLVETQ CCCCHHEEEEECCHHHHHHHHHCCEEEEEEEHHHHHHHHHCCCHHHHCCCCCCCHHHHHH CKYIDAARYGDNLHNRN HHHHHHHHCCCCCCCCC >Mature Secondary Structure MKSISKIKVRYAETDAMQVVHHANYYIYFEVAREDFIEQFGITYKEMEDQGIMMPLVETQ CCCCHHEEEEECCHHHHHHHHHCCEEEEEEEHHHHHHHHHCCCHHHHCCCCCCCHHHHHH CKYIDAARYGDNLHNRN HHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969507; 9384377 [H]