Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is yneP [H]

Identifier: 18310196

GI number: 18310196

Start: 1419709

End: 1419942

Strand: Reverse

Name: yneP [H]

Synonym: CPE1214

Alternate gene names: 18310196

Gene position: 1419942-1419709 (Counterclockwise)

Preceding gene: 18310197

Following gene: 18310195

Centisome position: 46.84

GC content: 29.06

Gene sequence:

>234_bases
ATGAAAAGTATAAGCAAAATTAAAGTAAGATATGCTGAAACAGATGCAATGCAGGTTGTACATCATGCCAATTATTATAT
ATATTTTGAAGTTGCAAGAGAAGATTTTATAGAACAATTTGGAATTACATATAAGGAAATGGAAGATCAAGGGATTATGA
TGCCTTTAGTAGAGACTCAATGTAAATATATAGATGCAGCAAGATATGGAGATAACTTACATAATAGAAACTGA

Upstream 100 bases:

>100_bases
ATTTTAGTTAGATATAAATATTTATAAAAGGTTTGAAAATCAAAATAAAATAATATAAAATTACAATATGAAAATAAGTT
TTTTATAAGGAGTATTTTAT

Downstream 100 bases:

>100_bases
GTATGATGAAATAACACCTATTAAGGTTTCATTAAAATACACAGTAAAAAGAGAAAATCATAATAAGCTTGTAGCTACAG
GCAAAACTTTACAAACTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 77; Mature: 77

Protein sequence:

>77_residues
MKSISKIKVRYAETDAMQVVHHANYYIYFEVAREDFIEQFGITYKEMEDQGIMMPLVETQCKYIDAARYGDNLHNRN

Sequences:

>Translated_77_residues
MKSISKIKVRYAETDAMQVVHHANYYIYFEVAREDFIEQFGITYKEMEDQGIMMPLVETQCKYIDAARYGDNLHNRN
>Mature_77_residues
MKSISKIKVRYAETDAMQVVHHANYYIYFEVAREDFIEQFGITYKEMEDQGIMMPLVETQCKYIDAARYGDNLHNRN

Specific function: Unknown

COG id: COG0824

COG function: function code R; Predicted thioesterase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 4-hydroxybenzoyl-CoA thioesterase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006684
- InterPro:   IPR006683 [H]

Pfam domain/function: PF03061 4HBT [H]

EC number: NA

Molecular weight: Translated: 9173; Mature: 9173

Theoretical pI: Translated: 5.59; Mature: 5.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
6.5 %Met     (Translated Protein)
7.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
6.5 %Met     (Mature Protein)
7.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSISKIKVRYAETDAMQVVHHANYYIYFEVAREDFIEQFGITYKEMEDQGIMMPLVETQ
CCCCHHEEEEECCHHHHHHHHHCCEEEEEEEHHHHHHHHHCCCHHHHCCCCCCCHHHHHH
CKYIDAARYGDNLHNRN
HHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MKSISKIKVRYAETDAMQVVHHANYYIYFEVAREDFIEQFGITYKEMEDQGIMMPLVETQ
CCCCHHEEEEECCHHHHHHHHHCCEEEEEEEHHHHHHHHHCCCHHHHCCCCCCCHHHHHH
CKYIDAARYGDNLHNRN
HHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969507; 9384377 [H]