Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18310191

Identifier: 18310191

GI number: 18310191

Start: 1414899

End: 1415234

Strand: Reverse

Name: 18310191

Synonym: CPE1209

Alternate gene names: NA

Gene position: 1415234-1414899 (Counterclockwise)

Preceding gene: 18310193

Following gene: 18310190

Centisome position: 46.69

GC content: 25.89

Gene sequence:

>336_bases
ATGTCAAAGTATAAAGTTGGAGATGAATTAATTATTGTTACAGATCCTAATCAAGAAACTAAAAAATTAAAAGATTTAAG
CTTCTTAAAAAAAGATGGAGATTTTGCTTGTTTATCATGGGGTATAAAAATTGTGGATGTATTATATGAAAAACCAAATG
TTACATTAACTTATAAAAATGTTATGGGAGAGACTAACAAAGTTTTTGCTGTATGTAAAAACGTTGAGAATTTTGATCAC
GAAAAAGTTTTAGAAAAGGCTTTACTTAAAGCTTTCCAAAATGAGCTTACAAACATTACAGTTATAAAGAATTCAGGGTT
AAAGACTATATTATAA

Upstream 100 bases:

>100_bases
TGTAAATAAATTAAAGAAAAATAGAACCTTGTAATACTTTACTTAAAGTTAAAGGAGTGGTAAACTTTACTATATAAATA
AATTACTTAGGAGGTTAATT

Downstream 100 bases:

>100_bases
TTAATTTAAGAGGGGATTGAGAGTATAATATGGCGTATTGTCCATTTTGGTCAAATGAGAGGGAGAAATTTAAGTGTTAT
AAGGAATGTCCAATGAATGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 111; Mature: 110

Protein sequence:

>111_residues
MSKYKVGDELIIVTDPNQETKKLKDLSFLKKDGDFACLSWGIKIVDVLYEKPNVTLTYKNVMGETNKVFAVCKNVENFDH
EKVLEKALLKAFQNELTNITVIKNSGLKTIL

Sequences:

>Translated_111_residues
MSKYKVGDELIIVTDPNQETKKLKDLSFLKKDGDFACLSWGIKIVDVLYEKPNVTLTYKNVMGETNKVFAVCKNVENFDH
EKVLEKALLKAFQNELTNITVIKNSGLKTIL
>Mature_110_residues
SKYKVGDELIIVTDPNQETKKLKDLSFLKKDGDFACLSWGIKIVDVLYEKPNVTLTYKNVMGETNKVFAVCKNVENFDHE
KVLEKALLKAFQNELTNITVIKNSGLKTIL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12611; Mature: 12480

Theoretical pI: Translated: 8.69; Mature: 8.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKYKVGDELIIVTDPNQETKKLKDLSFLKKDGDFACLSWGIKIVDVLYEKPNVTLTYKN
CCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHCCCCEEEEEHH
VMGETNKVFAVCKNVENFDHEKVLEKALLKAFQNELTNITVIKNSGLKTIL
HCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCC
>Mature Secondary Structure 
SKYKVGDELIIVTDPNQETKKLKDLSFLKKDGDFACLSWGIKIVDVLYEKPNVTLTYKN
CCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHCCCCEEEEEHH
VMGETNKVFAVCKNVENFDHEKVLEKALLKAFQNELTNITVIKNSGLKTIL
HCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA