Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

Click here to switch to the map view.

The map label for this gene is 18310176

Identifier: 18310176

GI number: 18310176

Start: 1391335

End: 1392597

Strand: Reverse

Name: 18310176

Synonym: CPE1194

Alternate gene names: NA

Gene position: 1392597-1391335 (Counterclockwise)

Preceding gene: 18310177

Following gene: 18310175

Centisome position: 45.94

GC content: 28.11

Gene sequence:

>1263_bases
ATGGAAATAGAAAATAATAAAAATTTTGCAGTATTTACTAAAGAGATGAGAAAGACTCATACTATTTTAGCTCCTACAAT
GTTGCCAATACACTTTAAACTTTTATCTGGAATAATGAAAAAGTACGGTTATAAATTAGAATTTTTTGATGGTGATACAA
ACAGCGCCATTGAAGAAGGATTAAAAAGTGTTCATAATGATATATGCTATCCAGCTATGATTGTAATTGGACAACTTATG
GAAGCTTTAAAAAGTGGAAAATATGACCCAGACAAAACGGCTTTAATAATGAGCCAAACTGGGGGCGGATGCCGTGCATC
TAATTATATACATTTATTAAGAAAGGCACTAAAAGAAAATAACTTAGAGCAAGTTCCAGTAATTTCTTTAAATGCAAGTG
GATTAGAAAAGCATGAAGGGTTTAAAATGTATCCAGGCTTATTAATAAAATGTATATATGCTCTTTATTATGGAGATCTG
CTTATGTATATGTATAATCAGTGTAAATCTTATGAGATTAATAAGGGTGAAACAGATAAGGTTTTAGATAAGTGGATTGA
GATTTTAAAAGAGAAGTTTGAAAGCTTAAAATATTTAAAGGTAAGAGAACTATATAAAAATATAATTTTAGATTTTTCTA
AGATAGAATTAGAAGAAACTGAAAAAGTAAAGGTTGGTATAGTGGGAGAAATTTATTTAAAGTATTCTCCTTTAGGAAAT
AATAATTTAGAGGAATTTTTAAGAGAAGATAATGCTGAAGTTGTTATGTCTGGTGTTACAGATTTTTTCATGTATTGTCT
ATCAAATTCAGAAATAGATTATAAATTATATGGAATGAAAAAAGTTTCAAGTAAATTCACTAAAATTGGATGTTCATATT
TAGAGCATTTACAAAATGTTATGATAGATTCAATAAAAAAATATAGTAATTTTAGAGCACCTGCGCCATTTAAGGAATTA
AAAACTTCTGTTGAAGAGTACATAGGAAGAGGAGTTAAAATGGGTGAAGGATGGCTTATGACTGCTGAAATGTTAGAACT
TATAAATAGTGGTGTAAATAATATAGTTTGTGCTCAACCCTTTGGATGTCTTCCTAATCACATAGTTGGAAAAGGTATGA
TTAGAGGAATTATGGAGAAACATCCAGAAGCTAATATAGTTGTTGTAGATTATGATCCATCTTCAACAAAGGTAAATCAA
GAAAATAGAATAAAATTAATGTTAGCTAATGCTAAATTAAGTGAATATATATTAAATAACTAA

Upstream 100 bases:

>100_bases
TATATACTCAATTAAAAATAGATGAAACTAATAATTTAGGCGCAGCTAAAATAAGGATAAGAAGCTTGCTAGAGGCTATA
GCACAGGAATAGGTGATAGA

Downstream 100 bases:

>100_bases
TAAATATAAGGTCTCAAATAAGGAATTGTTTTTTTATTTGAGACCTTAATCTTTAATATCTTAATTTTGTAAAGAGTTTT
TATTTAAAAATTTAGTTATA

Product: hypothetical protein

Products: NA

Alternate protein names: BadF/BadG/BcrA/BcrD ATPase Family Protein; CoA Activase; CoA-Substrate-Specific Activase Domain Protein; CoA-Substrate-Specific Activase Domain-Containing Protein; Activator Of 2-Hydroxyglutaryl-CoA Dehydratase; 2-Hydroxyglutaryl-CoA Dehydratase Activator; Activator Of-2-Hydroxyglutaryl-CoA Dehydratase; BadF/BadG/BcrA/BcrD ATPase; Activator Of -2-Hydroxyglutaryl-CoA Dehydratase; (R)-2-Hydroxyglutaryl-CoA Dehydratase Activator; (R)-2-Hydroxyglutaryl-CoA Dehydratase Activator Protein; CoA- Activase

Number of amino acids: Translated: 420; Mature: 420

Protein sequence:

>420_residues
MEIENNKNFAVFTKEMRKTHTILAPTMLPIHFKLLSGIMKKYGYKLEFFDGDTNSAIEEGLKSVHNDICYPAMIVIGQLM
EALKSGKYDPDKTALIMSQTGGGCRASNYIHLLRKALKENNLEQVPVISLNASGLEKHEGFKMYPGLLIKCIYALYYGDL
LMYMYNQCKSYEINKGETDKVLDKWIEILKEKFESLKYLKVRELYKNIILDFSKIELEETEKVKVGIVGEIYLKYSPLGN
NNLEEFLREDNAEVVMSGVTDFFMYCLSNSEIDYKLYGMKKVSSKFTKIGCSYLEHLQNVMIDSIKKYSNFRAPAPFKEL
KTSVEEYIGRGVKMGEGWLMTAEMLELINSGVNNIVCAQPFGCLPNHIVGKGMIRGIMEKHPEANIVVVDYDPSSTKVNQ
ENRIKLMLANAKLSEYILNN

Sequences:

>Translated_420_residues
MEIENNKNFAVFTKEMRKTHTILAPTMLPIHFKLLSGIMKKYGYKLEFFDGDTNSAIEEGLKSVHNDICYPAMIVIGQLM
EALKSGKYDPDKTALIMSQTGGGCRASNYIHLLRKALKENNLEQVPVISLNASGLEKHEGFKMYPGLLIKCIYALYYGDL
LMYMYNQCKSYEINKGETDKVLDKWIEILKEKFESLKYLKVRELYKNIILDFSKIELEETEKVKVGIVGEIYLKYSPLGN
NNLEEFLREDNAEVVMSGVTDFFMYCLSNSEIDYKLYGMKKVSSKFTKIGCSYLEHLQNVMIDSIKKYSNFRAPAPFKEL
KTSVEEYIGRGVKMGEGWLMTAEMLELINSGVNNIVCAQPFGCLPNHIVGKGMIRGIMEKHPEANIVVVDYDPSSTKVNQ
ENRIKLMLANAKLSEYILNN
>Mature_420_residues
MEIENNKNFAVFTKEMRKTHTILAPTMLPIHFKLLSGIMKKYGYKLEFFDGDTNSAIEEGLKSVHNDICYPAMIVIGQLM
EALKSGKYDPDKTALIMSQTGGGCRASNYIHLLRKALKENNLEQVPVISLNASGLEKHEGFKMYPGLLIKCIYALYYGDL
LMYMYNQCKSYEINKGETDKVLDKWIEILKEKFESLKYLKVRELYKNIILDFSKIELEETEKVKVGIVGEIYLKYSPLGN
NNLEEFLREDNAEVVMSGVTDFFMYCLSNSEIDYKLYGMKKVSSKFTKIGCSYLEHLQNVMIDSIKKYSNFRAPAPFKEL
KTSVEEYIGRGVKMGEGWLMTAEMLELINSGVNNIVCAQPFGCLPNHIVGKGMIRGIMEKHPEANIVVVDYDPSSTKVNQ
ENRIKLMLANAKLSEYILNN

Specific function: Unknown

COG id: COG3581

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47940; Mature: 47940

Theoretical pI: Translated: 7.46; Mature: 7.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIENNKNFAVFTKEMRKTHTILAPTMLPIHFKLLSGIMKKYGYKLEFFDGDTNSAIEEG
CCCCCCCCEEEEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHH
LKSVHNDICYPAMIVIGQLMEALKSGKYDPDKTALIMSQTGGGCRASNYIHLLRKALKEN
HHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHC
NLEQVPVISLNASGLEKHEGFKMYPGLLIKCIYALYYGDLLMYMYNQCKSYEINKGETDK
CCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH
VLDKWIEILKEKFESLKYLKVRELYKNIILDFSKIELEETEKVKVGIVGEIYLKYSPLGN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCEEEEEEEEEEEEEECCCCC
NNLEEFLREDNAEVVMSGVTDFFMYCLSNSEIDYKLYGMKKVSSKFTKIGCSYLEHLQNV
CCHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHH
MIDSIKKYSNFRAPAPFKELKTSVEEYIGRGVKMGEGWLMTAEMLELINSGVNNIVCAQP
HHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHCCCCCEEECCC
FGCLPNHIVGKGMIRGIMEKHPEANIVVVDYDPSSTKVNQENRIKLMLANAKLSEYILNN
CCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCEEEEEECCHHHHHHCCC
>Mature Secondary Structure
MEIENNKNFAVFTKEMRKTHTILAPTMLPIHFKLLSGIMKKYGYKLEFFDGDTNSAIEEG
CCCCCCCCEEEEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHH
LKSVHNDICYPAMIVIGQLMEALKSGKYDPDKTALIMSQTGGGCRASNYIHLLRKALKEN
HHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHC
NLEQVPVISLNASGLEKHEGFKMYPGLLIKCIYALYYGDLLMYMYNQCKSYEINKGETDK
CCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH
VLDKWIEILKEKFESLKYLKVRELYKNIILDFSKIELEETEKVKVGIVGEIYLKYSPLGN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCEEEEEEEEEEEEEECCCCC
NNLEEFLREDNAEVVMSGVTDFFMYCLSNSEIDYKLYGMKKVSSKFTKIGCSYLEHLQNV
CCHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHH
MIDSIKKYSNFRAPAPFKELKTSVEEYIGRGVKMGEGWLMTAEMLELINSGVNNIVCAQP
HHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHCCCCCEEECCC
FGCLPNHIVGKGMIRGIMEKHPEANIVVVDYDPSSTKVNQENRIKLMLANAKLSEYILNN
CCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCEEEEEECCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA