Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18310166

Identifier: 18310166

GI number: 18310166

Start: 1379716

End: 1380495

Strand: Reverse

Name: 18310166

Synonym: CPE1184

Alternate gene names: NA

Gene position: 1380495-1379716 (Counterclockwise)

Preceding gene: 18310167

Following gene: 18310165

Centisome position: 45.54

GC content: 31.67

Gene sequence:

>780_bases
ATGAAAGAAGTTCAAAAATATTTAGAGAGCAGAATTGGTTCGTATAGCTTTTTCTTTGAGGATTTAAAGAGTGGTTATAC
TTATGGTTATAATGAAAACGTTAAAATGATTTCAGCAGGTTGTATGAAATTACCTATAGCTATAGCTCTTATAAAAGAAG
TAGAGGAAGGCAAAATAGACTTTTTGGATAAAGTTAAAATAGAAAGTTCAGATAAGGTCTATGGAACTGGTATAATACAT
GAGTTTGGAGAGAGGGATTATACTGTATTTGAACTTATGGTAGCAATGCTAATTCAAAGTGATAATACAGCAGCAAATAA
AATAATTGATTTAGTTGGTATGGATAAAATAAATGAAACTATTAAGGAATTTGGTATGAAAAATACTGAGCTTAATAGAA
AAACTGCCGATGAAAGAAATTTCAAATCAGATGTAGAAAATTATACAACAGCTTATGATTTAACTTTAGCCTGGAAAAAA
CTTAGTGAGGGTTCTTTCTTAAGTAAAGAAAACTCCCAAATGCTTATAGATATACTTACAAGACAACAGATTAAAAACAA
ACTAGCTTTATATATACCAGACAATCTTAAGTTTGATATATCAAGCAAAACTGGAGACAAAAAGGGAGTTGAGAATGATA
CGGCCTTAATTCATACTCAAAAAGGGAACTTTGCTTGTACAGTAATGTCTAGTGGAATTCCTAACTCAGTCTACGGGACT
GTGACCTTGGCAAAGTCTGGTAAAATGACTTGGGACGCCATCATGAACAATTGGCACTAA

Upstream 100 bases:

>100_bases
AAAAAATTTACAATTAATACTTCAAAATTTTCTGAAAATATGGTACACTTTAAACAAGGCAACAATAAAAGCAACATTAA
AAGAAAGCTGGTGGGTATTT

Downstream 100 bases:

>100_bases
TATTTAATGTATTTTATAAAACCTTAATAATAGAACTTACAAATAATATGGAGAGAATATATAATTATTCTAAGATTTAA
ATTCTTATAAGAATTTAATT

Product: beta-lactamase

Products: substituted beta-amino acid

Alternate protein names: Beta-Lactamase Class A-Like Protein; Beta-Lactamase Protein; Beta-Lactamase Class A; NLP/P60 Protein; Peptidase

Number of amino acids: Translated: 259; Mature: 259

Protein sequence:

>259_residues
MKEVQKYLESRIGSYSFFFEDLKSGYTYGYNENVKMISAGCMKLPIAIALIKEVEEGKIDFLDKVKIESSDKVYGTGIIH
EFGERDYTVFELMVAMLIQSDNTAANKIIDLVGMDKINETIKEFGMKNTELNRKTADERNFKSDVENYTTAYDLTLAWKK
LSEGSFLSKENSQMLIDILTRQQIKNKLALYIPDNLKFDISSKTGDKKGVENDTALIHTQKGNFACTVMSSGIPNSVYGT
VTLAKSGKMTWDAIMNNWH

Sequences:

>Translated_259_residues
MKEVQKYLESRIGSYSFFFEDLKSGYTYGYNENVKMISAGCMKLPIAIALIKEVEEGKIDFLDKVKIESSDKVYGTGIIH
EFGERDYTVFELMVAMLIQSDNTAANKIIDLVGMDKINETIKEFGMKNTELNRKTADERNFKSDVENYTTAYDLTLAWKK
LSEGSFLSKENSQMLIDILTRQQIKNKLALYIPDNLKFDISSKTGDKKGVENDTALIHTQKGNFACTVMSSGIPNSVYGT
VTLAKSGKMTWDAIMNNWH
>Mature_259_residues
MKEVQKYLESRIGSYSFFFEDLKSGYTYGYNENVKMISAGCMKLPIAIALIKEVEEGKIDFLDKVKIESSDKVYGTGIIH
EFGERDYTVFELMVAMLIQSDNTAANKIIDLVGMDKINETIKEFGMKNTELNRKTADERNFKSDVENYTTAYDLTLAWKK
LSEGSFLSKENSQMLIDILTRQQIKNKLALYIPDNLKFDISSKTGDKKGVENDTALIHTQKGNFACTVMSSGIPNSVYGT
VTLAKSGKMTWDAIMNNWH

Specific function: Unknown

COG id: COG2367

COG function: function code V; Beta-lactamase class A

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.5.2.6

Molecular weight: Translated: 29312; Mature: 29312

Theoretical pI: Translated: 5.83; Mature: 5.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEVQKYLESRIGSYSFFFEDLKSGYTYGYNENVKMISAGCMKLPIAIALIKEVEEGKID
CHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCC
FLDKVKIESSDKVYGTGIIHEFGERDYTVFELMVAMLIQSDNTAANKIIDLVGMDKINET
CHHEEEECCCCCEEECHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCHHHHHHH
IKEFGMKNTELNRKTADERNFKSDVENYTTAYDLTLAWKKLSEGSFLSKENSQMLIDILT
HHHHCCCCCCCCCHHCCHHHHHHHHHHHHHHEEEEEHHHHCCCCCCCCCCCCHHHHHHHH
RQQIKNKLALYIPDNLKFDISSKTGDKKGVENDTALIHTQKGNFACTVMSSGIPNSVYGT
HHHHHCCEEEEECCCCEEEECCCCCCCCCCCCCCEEEEECCCCEEEEEECCCCCCCCEEE
VTLAKSGKMTWDAIMNNWH
EEEECCCCEEHHHHHCCCC
>Mature Secondary Structure
MKEVQKYLESRIGSYSFFFEDLKSGYTYGYNENVKMISAGCMKLPIAIALIKEVEEGKID
CHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCC
FLDKVKIESSDKVYGTGIIHEFGERDYTVFELMVAMLIQSDNTAANKIIDLVGMDKINET
CHHEEEECCCCCEEECHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCHHHHHHH
IKEFGMKNTELNRKTADERNFKSDVENYTTAYDLTLAWKKLSEGSFLSKENSQMLIDILT
HHHHCCCCCCCCCHHCCHHHHHHHHHHHHHHEEEEEHHHHCCCCCCCCCCCCHHHHHHHH
RQQIKNKLALYIPDNLKFDISSKTGDKKGVENDTALIHTQKGNFACTVMSSGIPNSVYGT
HHHHHCCEEEEECCCCEEEECCCCCCCCCCCCCCEEEEECCCCEEEEEECCCCCCCCEEE
VTLAKSGKMTWDAIMNNWH
EEEECCCCEEHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: beta-lactam; H2O

Specific reaction: A beta-lactam + H2O = a substituted beta-amino acid

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA