| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
Click here to switch to the map view.
The map label for this gene is maeB [C]
Identifier: 18310133
GI number: 18310133
Start: 1344643
End: 1345788
Strand: Direct
Name: maeB [C]
Synonym: CPE1151
Alternate gene names: 18310133
Gene position: 1344643-1345788 (Clockwise)
Preceding gene: 18310132
Following gene: 18310134
Centisome position: 44.36
GC content: 32.02
Gene sequence:
>1146_bases ATGACTAAGGACGAATTGTTAAAACAAAGAGAATTAGCTCATGGATTAATAAGTATAAACCCTAATTTCGATATAAATAA TAGAGAACAATTATCTCAAATATATACTCCAGGAGTATCAACTATTTGTAAAGAAGTTGAGCATCATCATAATATGGTAA AAACACTAACTTCTGTTGGAAATTCAATAGCTGTTATAACAGATGGTACGGCGGTTTTAGGTCTTGGAAATATAGGAACC CTTGCAGGATATCCTATAGTAGAGGCTAAAGCTCTAGTTTATAAAGACCTAGCTGGTGTAAACGCTATACCTTTATGTGT TGATCAAATAGGATGTAATGAACTGATTAAAACTATAAAAAGTATATCTCCAAGTTTTAGTGGAATTCATCTTGAAGATA TAAAGGCACCAGAATGTTTTTATATAGAAGAGGAACTTAAAAAGACTTTAAACATTCCAGTTTATCATGATGATCAACAT GGTACTGCCATTGCTGTTTTAGGTGCTCTTTATAATGGAGCTAAGGTGGTTAATAAGGATTTTTTAAAATTAAAGGTATT AATTTTAGGGGCAGGAGCTTCAGGGATTGCAACAGCAAAATTATTATTAAAGGCTGGAATAGAAGATATTATATTAGTTG ACAAAAATGGTGCTTTAGTTAATGGGGATGAAACTCTTAATGCTCCTCAAAAGGAAATGGCTAAAATAACAAATAAAGAA TTTAAAAAAGGAACTTTGAAAGAGGTAATTAAAGGACGAGATGTGTTTATAGGTTTATCAGAAGGAAATCTTGTAACTAA GGAAATGGTAGAAAGTATGAATGAGGATCCTATAATATTTGCTTTAGCTAATCCAACACCAGAGATAAAACCTGAAATTG CAAAGGAAGCTGGTGCAAGGGTTATTGCAACAGGTGGACCTTCTTATCCAAATCAGATTAATAATATATTAGTATTCCCA GGATTATTTAAAGGCTTATTAGAAGCTAAGGCAACTGATGTAACTTGTGATGTAATGATAGCAGTTGGCAAAAAACTAGC TTCCTTAGTTGAAAATCCAACTGCTGAAAAAATAATACCTGGAGTATTTGATGGTGATATAGTTAAGTCTGTTTCTGAAA CTGTGGTTAAAAATATTGAGAATTAG
Upstream 100 bases:
>100_bases TACGAGCTTACTTCAAGTATAAAAGAAAAAATACTTAAGTATAAAAACAGTAAAAATTAATTAGTATAAAATATTTAATA GTTTGAAGAGAGGTAATAAT
Downstream 100 bases:
>100_bases TTAATTTAGGGGGAGTTTATATGGAATTACAAAATAAAAAGATAGATGGTAAAGAAGAGAGCTTACTTAAAAAGTTTTTT AATATAAATCTTTTTGGGGT
Product: malate oxidoreductase
Products: NA
Alternate protein names: NAD-ME [H]
Number of amino acids: Translated: 381; Mature: 380
Protein sequence:
>381_residues MTKDELLKQRELAHGLISINPNFDINNREQLSQIYTPGVSTICKEVEHHHNMVKTLTSVGNSIAVITDGTAVLGLGNIGT LAGYPIVEAKALVYKDLAGVNAIPLCVDQIGCNELIKTIKSISPSFSGIHLEDIKAPECFYIEEELKKTLNIPVYHDDQH GTAIAVLGALYNGAKVVNKDFLKLKVLILGAGASGIATAKLLLKAGIEDIILVDKNGALVNGDETLNAPQKEMAKITNKE FKKGTLKEVIKGRDVFIGLSEGNLVTKEMVESMNEDPIIFALANPTPEIKPEIAKEAGARVIATGGPSYPNQINNILVFP GLFKGLLEAKATDVTCDVMIAVGKKLASLVENPTAEKIIPGVFDGDIVKSVSETVVKNIEN
Sequences:
>Translated_381_residues MTKDELLKQRELAHGLISINPNFDINNREQLSQIYTPGVSTICKEVEHHHNMVKTLTSVGNSIAVITDGTAVLGLGNIGT LAGYPIVEAKALVYKDLAGVNAIPLCVDQIGCNELIKTIKSISPSFSGIHLEDIKAPECFYIEEELKKTLNIPVYHDDQH GTAIAVLGALYNGAKVVNKDFLKLKVLILGAGASGIATAKLLLKAGIEDIILVDKNGALVNGDETLNAPQKEMAKITNKE FKKGTLKEVIKGRDVFIGLSEGNLVTKEMVESMNEDPIIFALANPTPEIKPEIAKEAGARVIATGGPSYPNQINNILVFP GLFKGLLEAKATDVTCDVMIAVGKKLASLVENPTAEKIIPGVFDGDIVKSVSETVVKNIEN >Mature_380_residues TKDELLKQRELAHGLISINPNFDINNREQLSQIYTPGVSTICKEVEHHHNMVKTLTSVGNSIAVITDGTAVLGLGNIGTL AGYPIVEAKALVYKDLAGVNAIPLCVDQIGCNELIKTIKSISPSFSGIHLEDIKAPECFYIEEELKKTLNIPVYHDDQHG TAIAVLGALYNGAKVVNKDFLKLKVLILGAGASGIATAKLLLKAGIEDIILVDKNGALVNGDETLNAPQKEMAKITNKEF KKGTLKEVIKGRDVFIGLSEGNLVTKEMVESMNEDPIIFALANPTPEIKPEIAKEAGARVIATGGPSYPNQINNILVFPG LFKGLLEAKATDVTCDVMIAVGKKLASLVENPTAEKIIPGVFDGDIVKSVSETVVKNIEN
Specific function: In addition to the NAD-dependent oxidative decarboxylation of L-malate, the enzyme catalyzes the decarboxylation of oxaloacetate [H]
COG id: COG0281
COG function: function code C; Malic enzyme
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the malic enzymes family [H]
Homologues:
Organism=Homo sapiens, GI4505145, Length=396, Percent_Identity=24.7474747474747, Blast_Score=81, Evalue=1e-15, Organism=Homo sapiens, GI270265879, Length=369, Percent_Identity=25.4742547425474, Blast_Score=78, Evalue=1e-14, Organism=Homo sapiens, GI4505143, Length=381, Percent_Identity=24.6719160104987, Blast_Score=76, Evalue=4e-14, Organism=Escherichia coli, GI1788806, Length=373, Percent_Identity=40.2144772117962, Blast_Score=283, Evalue=2e-77, Organism=Escherichia coli, GI87081919, Length=410, Percent_Identity=23.4146341463415, Blast_Score=84, Evalue=1e-17, Organism=Saccharomyces cerevisiae, GI6322823, Length=362, Percent_Identity=24.8618784530387, Blast_Score=89, Evalue=2e-18, Organism=Drosophila melanogaster, GI21356279, Length=402, Percent_Identity=25.8706467661692, Blast_Score=93, Evalue=2e-19, Organism=Drosophila melanogaster, GI281362672, Length=402, Percent_Identity=25.8706467661692, Blast_Score=93, Evalue=3e-19, Organism=Drosophila melanogaster, GI281362674, Length=402, Percent_Identity=25.8706467661692, Blast_Score=93, Evalue=3e-19, Organism=Drosophila melanogaster, GI78707240, Length=373, Percent_Identity=24.9329758713137, Blast_Score=80, Evalue=3e-15, Organism=Drosophila melanogaster, GI78707242, Length=373, Percent_Identity=24.9329758713137, Blast_Score=80, Evalue=3e-15, Organism=Drosophila melanogaster, GI78707238, Length=373, Percent_Identity=24.9329758713137, Blast_Score=80, Evalue=3e-15, Organism=Drosophila melanogaster, GI24646386, Length=395, Percent_Identity=25.3164556962025, Blast_Score=79, Evalue=4e-15, Organism=Drosophila melanogaster, GI24646388, Length=395, Percent_Identity=25.3164556962025, Blast_Score=79, Evalue=4e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015884 - InterPro: IPR012301 - InterPro: IPR012302 - InterPro: IPR001891 - InterPro: IPR016040 [H]
Pfam domain/function: PF00390 malic; PF03949 Malic_M [H]
EC number: =1.1.1.38 [H]
Molecular weight: Translated: 40826; Mature: 40695
Theoretical pI: Translated: 5.48; Mature: 5.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKDELLKQRELAHGLISINPNFDINNREQLSQIYTPGVSTICKEVEHHHNMVKTLTSVG CCHHHHHHHHHHHCCEEEECCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCC NSIAVITDGTAVLGLGNIGTLAGYPIVEAKALVYKDLAGVNAIPLCVDQIGCNELIKTIK CEEEEEECCCEEEECCCCHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHH SISPSFSGIHLEDIKAPECFYIEEELKKTLNIPVYHDDQHGTAIAVLGALYNGAKVVNKD HCCCCCCCEEEECCCCCCEEEEHHHHHHHCCCCEEECCCCCHHHHHHHHHHCCHHHHCCH FLKLKVLILGAGASGIATAKLLLKAGIEDIILVDKNGALVNGDETLNAPQKEMAKITNKE HEEEEEEEEECCCCHHHHHHHHHHCCCCEEEEECCCCCEECCCHHCCCCHHHHHHHHHHH FKKGTLKEVIKGRDVFIGLSEGNLVTKEMVESMNEDPIIFALANPTPEIKPEIAKEAGAR HCCCHHHHHHCCCCEEEEECCCCCHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHCCCE VIATGGPSYPNQINNILVFPGLFKGLLEAKATDVTCDVMIAVGKKLASLVENPTAEKIIP EEECCCCCCCHHHCCEEECHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHCC GVFDGDIVKSVSETVVKNIEN CCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure TKDELLKQRELAHGLISINPNFDINNREQLSQIYTPGVSTICKEVEHHHNMVKTLTSVG CHHHHHHHHHHHCCEEEECCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCC NSIAVITDGTAVLGLGNIGTLAGYPIVEAKALVYKDLAGVNAIPLCVDQIGCNELIKTIK CEEEEEECCCEEEECCCCHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHH SISPSFSGIHLEDIKAPECFYIEEELKKTLNIPVYHDDQHGTAIAVLGALYNGAKVVNKD HCCCCCCCEEEECCCCCCEEEEHHHHHHHCCCCEEECCCCCHHHHHHHHHHCCHHHHCCH FLKLKVLILGAGASGIATAKLLLKAGIEDIILVDKNGALVNGDETLNAPQKEMAKITNKE HEEEEEEEEECCCCHHHHHHHHHHCCCCEEEEECCCCCEECCCHHCCCCHHHHHHHHHHH FKKGTLKEVIKGRDVFIGLSEGNLVTKEMVESMNEDPIIFALANPTPEIKPEIAKEAGAR HCCCHHHHHHCCCCEEEEECCCCCHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHCCCE VIATGGPSYPNQINNILVFPGLFKGLLEAKATDVTCDVMIAVGKKLASLVENPTAEKIIP EEECCCCCCCHHHCCEEECHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHCC GVFDGDIVKSVSETVVKNIEN CCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2644282 [H]