| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is citG [H]
Identifier: 18310127
GI number: 18310127
Start: 1339126
End: 1339986
Strand: Reverse
Name: citG [H]
Synonym: CPE1145
Alternate gene names: 18310127
Gene position: 1339986-1339126 (Counterclockwise)
Preceding gene: 18310143
Following gene: 18310126
Centisome position: 44.2
GC content: 27.76
Gene sequence:
>861_bases TTGAGTATTAACCAAGAGGTTTTCTTAGAAAAACTAAACAGTTTAATAATAAAATCCTTATTATATGAGGTAAGCTGTTA CCCCTCCCCAGGATTAGTATCTCCAATTTCAAATGGAGCACATAAGGATATGGATTACTACACTTTTTTAGATAGCATCT CAGTAATTGGTCCTAAATTTAGAGAAATAGCAGAAATAAGTATGTCAGATATACAAGTAAGTGATTTATTAAATAAAATA CGTCCAATTGGATTAAAAATAGAAGAAGCTATGTTTCATGTTACAAATAATATAAATACACATAAAGGTTTGATTTTCTT AATGGGTGTTGTTTGTGCAGCAACATCAAAAGCATTTTATGAAGGTAAACCTTTTAAAGAAATAAGAAATTTAATAAAAG AGATGACAAGTGGTTTAGTTTCTAAGGAATTAAACTTAAAAACTAATAAGAAAAATGAAACTTATGGTGAAAAGATATTT AGATTATATGGTATAACAGGGATAAGAGGAGAAGTTGAAAAAGGACTTCCAGCTGTGTTTGATTATAGCCTTCCTTTTTA TATGGAGAATAAAAATTTAAAAACAAATGAAAGGCTGTATTTAACATTATTTTGCATAATGGCTAATTGTGAAGATTCTA CACTTTTACATAAAAATGATATTTACGTTTTAGAAGAGGTTAAGAAAAGGTCTCAAGAAATACTTAATATGATACATTCT AAAGAACCTGAAATCATAAAAGAAAAAATATTTGAAATTGATAAGGAGTTTTCAGAAAGAGGCATAAGCCCTGGAGGCAG TGCAGATTTATTGGCAATAACTGTGTTTTTAGATGGAATAAAAAAATATTTTCCTTTATAA
Upstream 100 bases:
>100_bases ATTTTCATAAAAATTTAGATTTTTTATTATTAATATTGATTTGTGTATTTTTATCATTTGTGATATATTTTTCATATGTT AAAGAAAAGGAGTGGTTATT
Downstream 100 bases:
>100_bases TTAAATTAGCATTAACTTATAAATAATCTAAAACAGAGGTATGACAATATGAAATTTGAAGTAAATTTTGAAGATCAATA TAATGAATTTTTAGCTAATA
Product: CitG protein
Products: NA
Alternate protein names: 2-(5''-triphosphoribosyl)-3'-dephospho-CoA synthase [H]
Number of amino acids: Translated: 286; Mature: 285
Protein sequence:
>286_residues MSINQEVFLEKLNSLIIKSLLYEVSCYPSPGLVSPISNGAHKDMDYYTFLDSISVIGPKFREIAEISMSDIQVSDLLNKI RPIGLKIEEAMFHVTNNINTHKGLIFLMGVVCAATSKAFYEGKPFKEIRNLIKEMTSGLVSKELNLKTNKKNETYGEKIF RLYGITGIRGEVEKGLPAVFDYSLPFYMENKNLKTNERLYLTLFCIMANCEDSTLLHKNDIYVLEEVKKRSQEILNMIHS KEPEIIKEKIFEIDKEFSERGISPGGSADLLAITVFLDGIKKYFPL
Sequences:
>Translated_286_residues MSINQEVFLEKLNSLIIKSLLYEVSCYPSPGLVSPISNGAHKDMDYYTFLDSISVIGPKFREIAEISMSDIQVSDLLNKI RPIGLKIEEAMFHVTNNINTHKGLIFLMGVVCAATSKAFYEGKPFKEIRNLIKEMTSGLVSKELNLKTNKKNETYGEKIF RLYGITGIRGEVEKGLPAVFDYSLPFYMENKNLKTNERLYLTLFCIMANCEDSTLLHKNDIYVLEEVKKRSQEILNMIHS KEPEIIKEKIFEIDKEFSERGISPGGSADLLAITVFLDGIKKYFPL >Mature_285_residues SINQEVFLEKLNSLIIKSLLYEVSCYPSPGLVSPISNGAHKDMDYYTFLDSISVIGPKFREIAEISMSDIQVSDLLNKIR PIGLKIEEAMFHVTNNINTHKGLIFLMGVVCAATSKAFYEGKPFKEIRNLIKEMTSGLVSKELNLKTNKKNETYGEKIFR LYGITGIRGEVEKGLPAVFDYSLPFYMENKNLKTNERLYLTLFCIMANCEDSTLLHKNDIYVLEEVKKRSQEILNMIHSK EPEIIKEKIFEIDKEFSERGISPGGSADLLAITVFLDGIKKYFPL
Specific function: Catalyzes The Formation Of 2-(5''-Triphosphoribosyl)-3'- Dephosphocoenzyme-A, The Precursor Of The Prosthetic Group Of The Holo-Acyl Carrier Protein (Gamma Chain) Of Citrate Lyase, From ATP And Dephospho-CoA. [C]
COG id: COG1767
COG function: function code H; Triphosphoribosyl-dephospho-CoA synthetase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CitG/MdcB family [H]
Homologues:
Organism=Escherichia coli, GI1786830, Length=273, Percent_Identity=33.6996336996337, Blast_Score=145, Evalue=2e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002736 - InterPro: IPR017551 [H]
Pfam domain/function: PF01874 CitG [H]
EC number: =2.7.8.25 [H]
Molecular weight: Translated: 32546; Mature: 32415
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: PS00430 TONB_DEPENDENT_REC_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSINQEVFLEKLNSLIIKSLLYEVSCYPSPGLVSPISNGAHKDMDYYTFLDSISVIGPKF CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHH REIAEISMSDIQVSDLLNKIRPIGLKIEEAMFHVTNNINTHKGLIFLMGVVCAATSKAFY HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH EGKPFKEIRNLIKEMTSGLVSKELNLKTNKKNETYGEKIFRLYGITGIRGEVEKGLPAVF CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHCCCEEE DYSLPFYMENKNLKTNERLYLTLFCIMANCEDSTLLHKNDIYVLEEVKKRSQEILNMIHS ECCCCEEECCCCCCCCCHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHC KEPEIIKEKIFEIDKEFSERGISPGGSADLLAITVFLDGIKKYFPL CCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SINQEVFLEKLNSLIIKSLLYEVSCYPSPGLVSPISNGAHKDMDYYTFLDSISVIGPKF CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHH REIAEISMSDIQVSDLLNKIRPIGLKIEEAMFHVTNNINTHKGLIFLMGVVCAATSKAFY HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH EGKPFKEIRNLIKEMTSGLVSKELNLKTNKKNETYGEKIFRLYGITGIRGEVEKGLPAVF CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHCCCEEE DYSLPFYMENKNLKTNERLYLTLFCIMANCEDSTLLHKNDIYVLEEVKKRSQEILNMIHS ECCCCEEECCCCCCCCCHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHC KEPEIIKEKIFEIDKEFSERGISPGGSADLLAITVFLDGIKKYFPL CCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10952301 [H]