| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is 18310121
Identifier: 18310121
GI number: 18310121
Start: 1334196
End: 1334990
Strand: Reverse
Name: 18310121
Synonym: CPE1139
Alternate gene names: NA
Gene position: 1334990-1334196 (Counterclockwise)
Preceding gene: 18310126
Following gene: 18310079
Centisome position: 44.04
GC content: 27.8
Gene sequence:
>795_bases ATGAAAAAATTATTAGTTGCTCTATTAACAGGATTATCATTAATAGGCTTAGTTGGATGTGGAGAAGCTCCAATAACACC AGAATCAATAAATACTAAACTAGACCAATGTATAGAAATATCAAACAAAGATGCGGAAATACAAAAACAATATGACTGGG CAAAAGAAAATAATAGACAATTCGAAGGTGTAAATGAATTTACAGATGATGAATTAAATACAGTAGAATATCAAAAATTC TTAAACTTATCAAAAGCAGAAATATCAGTAATGGATAATGATGAACTTAAGAAAACTAATGCAATAGTAGATGCAGTATT AATGATGGCAACTGATGATTGCAAAGAGCAATTAATAATACCTTATTCAGTATCTACAAGAGATACAATGATAAGAGCTT ATACTGAACCAAATATTATAATAAATGAAATGCATAGAATAGTTAATGAATTAGAAACTTATAAGATGAATGTAAATGAA TTTATAGAAGTTGGAGTTCCTGACAACTGGGAAATGATAGGAGTTATGCTACCAGAATCAGACCAATCATTTAAAGAAAT TGTAGACACAATAGAAGAATATAATAAAATTTATATATTTGATGATGAATATTTACAAATTATGAAAGAACTTCAAACAT CATTTCATAACTTTGCAGAGCAATATCCAAAAGAATCTTATCCAAGAACAGAAGATAGTTTAACATTACAACAAGCTAGA AAAAGCTTTAATCAAGCATATGACAAATTAATGATGTTTGATATAAGACAAGCAGAAGGAGTAGTAGCTCCATAA
Upstream 100 bases:
>100_bases AATCTCTTCTAAAGTTATTTCCATATCCCCTAATTCAATAAATCCCATCCTTTTGAATATATTGTAATATTAATCCCTAA AATTCTAAAGGAGATATATC
Downstream 100 bases:
>100_bases AACTGGATTTTTGGAATACACAACTATTATTTTTTAAAATAAACGAACTGCAACTTTTTTCTAGAATTACCAACTGTATA AGTATTATTTACTAAAATAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 264; Mature: 264
Protein sequence:
>264_residues MKKLLVALLTGLSLIGLVGCGEAPITPESINTKLDQCIEISNKDAEIQKQYDWAKENNRQFEGVNEFTDDELNTVEYQKF LNLSKAEISVMDNDELKKTNAIVDAVLMMATDDCKEQLIIPYSVSTRDTMIRAYTEPNIIINEMHRIVNELETYKMNVNE FIEVGVPDNWEMIGVMLPESDQSFKEIVDTIEEYNKIYIFDDEYLQIMKELQTSFHNFAEQYPKESYPRTEDSLTLQQAR KSFNQAYDKLMMFDIRQAEGVVAP
Sequences:
>Translated_264_residues MKKLLVALLTGLSLIGLVGCGEAPITPESINTKLDQCIEISNKDAEIQKQYDWAKENNRQFEGVNEFTDDELNTVEYQKF LNLSKAEISVMDNDELKKTNAIVDAVLMMATDDCKEQLIIPYSVSTRDTMIRAYTEPNIIINEMHRIVNELETYKMNVNE FIEVGVPDNWEMIGVMLPESDQSFKEIVDTIEEYNKIYIFDDEYLQIMKELQTSFHNFAEQYPKESYPRTEDSLTLQQAR KSFNQAYDKLMMFDIRQAEGVVAP >Mature_264_residues MKKLLVALLTGLSLIGLVGCGEAPITPESINTKLDQCIEISNKDAEIQKQYDWAKENNRQFEGVNEFTDDELNTVEYQKF LNLSKAEISVMDNDELKKTNAIVDAVLMMATDDCKEQLIIPYSVSTRDTMIRAYTEPNIIINEMHRIVNELETYKMNVNE FIEVGVPDNWEMIGVMLPESDQSFKEIVDTIEEYNKIYIFDDEYLQIMKELQTSFHNFAEQYPKESYPRTEDSLTLQQAR KSFNQAYDKLMMFDIRQAEGVVAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30534; Mature: 30534
Theoretical pI: Translated: 4.14; Mature: 4.14
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLLVALLTGLSLIGLVGCGEAPITPESINTKLDQCIEISNKDAEIQKQYDWAKENNRQ CHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCC FEGVNEFTDDELNTVEYQKFLNLSKAEISVMDNDELKKTNAIVDAVLMMATDDCKEQLII CCCCCCCCCCCCHHHHHHHHHCCCHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCEEE PYSVSTRDTMIRAYTEPNIIINEMHRIVNELETYKMNVNEFIEVGVPDNWEMIGVMLPES EEECCCHHHEEEEECCCCHHHHHHHHHHHHHHHHHCCHHHHEECCCCCCCEEEEEEECCC DQSFKEIVDTIEEYNKIYIFDDEYLQIMKELQTSFHNFAEQYPKESYPRTEDSLTLQQAR CHHHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH KSFNQAYDKLMMFDIRQAEGVVAP HHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MKKLLVALLTGLSLIGLVGCGEAPITPESINTKLDQCIEISNKDAEIQKQYDWAKENNRQ CHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCC FEGVNEFTDDELNTVEYQKFLNLSKAEISVMDNDELKKTNAIVDAVLMMATDDCKEQLII CCCCCCCCCCCCHHHHHHHHHCCCHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCEEE PYSVSTRDTMIRAYTEPNIIINEMHRIVNELETYKMNVNEFIEVGVPDNWEMIGVMLPES EEECCCHHHEEEEECCCCHHHHHHHHHHHHHHHHHCCHHHHEECCCCCCCEEEEEEECCC DQSFKEIVDTIEEYNKIYIFDDEYLQIMKELQTSFHNFAEQYPKESYPRTEDSLTLQQAR CHHHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH KSFNQAYDKLMMFDIRQAEGVVAP HHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA