Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

Click here to switch to the map view.

The map label for this gene is 18310094

Identifier: 18310094

GI number: 18310094

Start: 1311383

End: 1311649

Strand: Direct

Name: 18310094

Synonym: CPE1112

Alternate gene names: NA

Gene position: 1311383-1311649 (Clockwise)

Preceding gene: 18310093

Following gene: 18310095

Centisome position: 43.26

GC content: 22.47

Gene sequence:

>267_bases
ATGTTAGATGTAAATGAATTAAAGCTGAAAAATATAAGATTTTATAAAGGAAGATATGTTGTTAGATTAATGAGAAGTTA
TAAAACACTATCTGAAGCAAAGAAATTAAAGAAATTCTTAAAGCAATATATAAATTGTGTTAGTATATATCAAACAAAAA
ATGGATTTATGGTACAAACATATAAAGAATATAAAACTTTAGAAGATGCAATAAAGGTAAGAGATTATTTAACAGAAAAA
TTAGAAGAACGAAAGAGTGTAGCTTAA

Upstream 100 bases:

>100_bases
TTTATAAAGTCGCAAAGATAGAAAATAAATGGGGTTTAATATTGTATATAGGAACAATAATTATTTGCTTAATAAAAATA
ATAACAGGAGTGTGTAGTAT

Downstream 100 bases:

>100_bases
TGTTTATAACGAAATAAATATGTTAGGAGAGAATTAATATGGGAAAGAAAGTTTTGGCGTTAAGTATTTTGGGACTAATA
GCAAGTTTTAGTTTAACAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 88; Mature: 88

Protein sequence:

>88_residues
MLDVNELKLKNIRFYKGRYVVRLMRSYKTLSEAKKLKKFLKQYINCVSIYQTKNGFMVQTYKEYKTLEDAIKVRDYLTEK
LEERKSVA

Sequences:

>Translated_88_residues
MLDVNELKLKNIRFYKGRYVVRLMRSYKTLSEAKKLKKFLKQYINCVSIYQTKNGFMVQTYKEYKTLEDAIKVRDYLTEK
LEERKSVA
>Mature_88_residues
MLDVNELKLKNIRFYKGRYVVRLMRSYKTLSEAKKLKKFLKQYINCVSIYQTKNGFMVQTYKEYKTLEDAIKVRDYLTEK
LEERKSVA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10671; Mature: 10671

Theoretical pI: Translated: 10.34; Mature: 10.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDVNELKLKNIRFYKGRYVVRLMRSYKTLSEAKKLKKFLKQYINCVSIYQTKNGFMVQT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHH
YKEYKTLEDAIKVRDYLTEKLEERKSVA
HHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLDVNELKLKNIRFYKGRYVVRLMRSYKTLSEAKKLKKFLKQYINCVSIYQTKNGFMVQT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHH
YKEYKTLEDAIKVRDYLTEKLEERKSVA
HHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA