| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is 18310092
Identifier: 18310092
GI number: 18310092
Start: 1310119
End: 1311216
Strand: Direct
Name: 18310092
Synonym: CPE1110
Alternate gene names: NA
Gene position: 1310119-1311216 (Clockwise)
Preceding gene: 18310091
Following gene: 18310093
Centisome position: 43.22
GC content: 27.78
Gene sequence:
>1098_bases ATGAAGGAATTACAATTATTAACAGAAAAAGAAGTATTAAAAGGACAAAACATAACAATTTATGGGACAGGAGAAAATCC ATTATTTCTAGCTAGAGATGTAGCAAATATAATAGGACATTCTAAAGCAAGAGATATGATAGCAGATGTAGATGAAGATG AAAAAATAAAGATGCCTTTTAAAATGGCGTCTTCAAGATCAACACAGTCTCAATGGTTTTTAACAGAAGATGGACTTTAT GAAGTATTACTTACAAGTAGAAAACCTGTTGCAAAACAATTCAGAAAAGAAGTTAAGAAAATTCTTAAACAACTAAGACA AAAAGGCGTTGTAATACTAGAGAATGCTACTAAAGAAGCTATTAATTTCGAAGAGAAGTTTGGTACATACAGAATTAGAA AAACATTCTTAAACTCTACAAATATTACAGAAGATTATAAATTATTTACAGAGTTATCTAAACAAGAATGGAAAGCTAAA AGATTAAATAATGATGATAGAGTTAAACTATCTAAGCTAATTGTCAAAGGTTTAGAACAAAGACTAAATAGAGATAAGTC TAAATTAAGAGCAAGTGAAATGTTAGCTATGCAGGAATTATTAACTGATATAAATAAAGATATTATTAAACTGGAAAATA AAAAACATGGAGGTTTGAAAACGGGGCAACAGAAGCAGATAACTAAATTAAAGCAACAATTAGAAGATATAGAAACTAAA TATGTTGTTAGAGATGAAGAATTTGTGACGTTAGATTGTCATGGCTTTAGTAATAATTATATGTATAGCTATATAGAAGG TAAATGCGTTAAGTCTAATGCATATAAAAATTGGATTAAATATTTTCCTTATAATCAAGTGCCAGATGTCGATTATTGGG ATGTAGACTTTACTAAACCTGTCGAGATGTTTATAAACTACATAGCAAAGAAAGATGTAGATATTCAAAATTTAGATAAG TCATTTATTGACCGTATTTTTGATATATATAATTTTAATGACAATATAGTACAAGCAGTACATAGACAAAGCATCGGAAC TGTAGATAATTTTGCAGACGGAAAAATATCTTTTTACATAAGAAATATAGAAGAATAG
Upstream 100 bases:
>100_bases CAAGCTAAGAAAGTTAGATCATAGGTGGGTTTATTACACAGTTAAGATGTTCTGTGTTATCAAAAACATCAAAAATTTAT TATAAAGGGGATATTAAAAA
Downstream 100 bases:
>100_bases TAGGTGATTATACAATGATAATTGATTATGTTTATTTATTAATATTTGCATTGTTTATTTTGACAATTTATAAAGTCGCA AAGATAGAAAATAAATGGGG
Product: hypothetical protein
Products: NA
Alternate protein names: BRO Family N- Domain-Containing Protein; Phage Protein; Antirepressor; Bacteriophage Antirepressor; Phage Antirepressor
Number of amino acids: Translated: 365; Mature: 365
Protein sequence:
>365_residues MKELQLLTEKEVLKGQNITIYGTGENPLFLARDVANIIGHSKARDMIADVDEDEKIKMPFKMASSRSTQSQWFLTEDGLY EVLLTSRKPVAKQFRKEVKKILKQLRQKGVVILENATKEAINFEEKFGTYRIRKTFLNSTNITEDYKLFTELSKQEWKAK RLNNDDRVKLSKLIVKGLEQRLNRDKSKLRASEMLAMQELLTDINKDIIKLENKKHGGLKTGQQKQITKLKQQLEDIETK YVVRDEEFVTLDCHGFSNNYMYSYIEGKCVKSNAYKNWIKYFPYNQVPDVDYWDVDFTKPVEMFINYIAKKDVDIQNLDK SFIDRIFDIYNFNDNIVQAVHRQSIGTVDNFADGKISFYIRNIEE
Sequences:
>Translated_365_residues MKELQLLTEKEVLKGQNITIYGTGENPLFLARDVANIIGHSKARDMIADVDEDEKIKMPFKMASSRSTQSQWFLTEDGLY EVLLTSRKPVAKQFRKEVKKILKQLRQKGVVILENATKEAINFEEKFGTYRIRKTFLNSTNITEDYKLFTELSKQEWKAK RLNNDDRVKLSKLIVKGLEQRLNRDKSKLRASEMLAMQELLTDINKDIIKLENKKHGGLKTGQQKQITKLKQQLEDIETK YVVRDEEFVTLDCHGFSNNYMYSYIEGKCVKSNAYKNWIKYFPYNQVPDVDYWDVDFTKPVEMFINYIAKKDVDIQNLDK SFIDRIFDIYNFNDNIVQAVHRQSIGTVDNFADGKISFYIRNIEE >Mature_365_residues MKELQLLTEKEVLKGQNITIYGTGENPLFLARDVANIIGHSKARDMIADVDEDEKIKMPFKMASSRSTQSQWFLTEDGLY EVLLTSRKPVAKQFRKEVKKILKQLRQKGVVILENATKEAINFEEKFGTYRIRKTFLNSTNITEDYKLFTELSKQEWKAK RLNNDDRVKLSKLIVKGLEQRLNRDKSKLRASEMLAMQELLTDINKDIIKLENKKHGGLKTGQQKQITKLKQQLEDIETK YVVRDEEFVTLDCHGFSNNYMYSYIEGKCVKSNAYKNWIKYFPYNQVPDVDYWDVDFTKPVEMFINYIAKKDVDIQNLDK SFIDRIFDIYNFNDNIVQAVHRQSIGTVDNFADGKISFYIRNIEE
Specific function: Unknown
COG id: COG3617
COG function: function code K; Prophage antirepressor
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42845; Mature: 42845
Theoretical pI: Translated: 9.30; Mature: 9.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKELQLLTEKEVLKGQNITIYGTGENPLFLARDVANIIGHSKARDMIADVDEDEKIKMPF CCCHHHHHHHHHHCCCCEEEEECCCCCEEHHHHHHHHHCCHHHHHHHHCCCCCCEEECCH KMASSRSTQSQWFLTEDGLYEVLLTSRKPVAKQFRKEVKKILKQLRQKGVVILENATKEA HHHCCCCCCCCEEEECCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHH INFEEKFGTYRIRKTFLNSTNITEDYKLFTELSKQEWKAKRLNNDDRVKLSKLIVKGLEQ HCHHHHHCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH RLNRDKSKLRASEMLAMQELLTDINKDIIKLENKKHGGLKTGQQKQITKLKQQLEDIETK HHCCCHHHHHHHHHHHHHHHHHHHCHHHEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHH YVVRDEEFVTLDCHGFSNNYMYSYIEGKCVKSNAYKNWIKYFPYNQVPDVDYWDVDFTKP EEEECCCEEEEEECCCCCCEEEEEECCEEECCHHHHHHHHHCCCCCCCCCCCCCCCCCCH VEMFINYIAKKDVDIQNLDKSFIDRIFDIYNFNDNIVQAVHRQSIGTVDNFADGKISFYI HHHHHHHHHHCCCCHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCEEEEEE RNIEE ECCCC >Mature Secondary Structure MKELQLLTEKEVLKGQNITIYGTGENPLFLARDVANIIGHSKARDMIADVDEDEKIKMPF CCCHHHHHHHHHHCCCCEEEEECCCCCEEHHHHHHHHHCCHHHHHHHHCCCCCCEEECCH KMASSRSTQSQWFLTEDGLYEVLLTSRKPVAKQFRKEVKKILKQLRQKGVVILENATKEA HHHCCCCCCCCEEEECCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHH INFEEKFGTYRIRKTFLNSTNITEDYKLFTELSKQEWKAKRLNNDDRVKLSKLIVKGLEQ HCHHHHHCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH RLNRDKSKLRASEMLAMQELLTDINKDIIKLENKKHGGLKTGQQKQITKLKQQLEDIETK HHCCCHHHHHHHHHHHHHHHHHHHCHHHEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHH YVVRDEEFVTLDCHGFSNNYMYSYIEGKCVKSNAYKNWIKYFPYNQVPDVDYWDVDFTKP EEEECCCEEEEEECCCCCCEEEEEECCEEECCHHHHHHHHHCCCCCCCCCCCCCCCCCCH VEMFINYIAKKDVDIQNLDKSFIDRIFDIYNFNDNIVQAVHRQSIGTVDNFADGKISFYI HHHHHHHHHHCCCCHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCEEEEEE RNIEE ECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA