Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18310089

Identifier: 18310089

GI number: 18310089

Start: 1307775

End: 1308695

Strand: Direct

Name: 18310089

Synonym: CPE1107

Alternate gene names: NA

Gene position: 1307775-1308695 (Clockwise)

Preceding gene: 18310088

Following gene: 18310090

Centisome position: 43.14

GC content: 26.38

Gene sequence:

>921_bases
ATGGAAAGACAAGGAAATTTTGTAAAAATACCTAATTGCATGATAGTAGGTGAAGAAACTTTAATTAAAAAATATGGTGA
TAAGGCTTTAATAGTATATATATATTTAGAAAATCATAGAACACTTAGAAACAATGTATATATATCGTTAGGAAACTGCA
TAGAAGAATGTGGGTACAAGCCTGATAATCATAAAGGAAAGACAAACGATCAATTTAGGAAGATATTATTAGGCTTTAAA
GAAAAAGGAATTATAGAAACTGATGTAGATTTAGAAAAAGTCAAAATAAATGATTTAATACATTGTACCATGAAAGAAAT
AGATGATAAATTCTTTACAATATATGATTGTGAATTAGATAAAATCATTGAATATGGAAAGAAAGACGATAAATTAAACA
TATTAAAAGTATTTGCAGATATAGAGTGTAGAAGGCATAAGAATGCAGACAACGTTAATCCTGAAACTTATAGTGAATAT
GAGGTAGCTTATCCTTCATATAACCAATTATGTAAAGATACTTTGATAAGTTCGGAAACATCAGTAAAAAAGTACGTAAA
TATATTGGTTGAATTAGGAATAATTATAGTAGGCAACAATGGAGATAGAGTGAATACAATAACTGGTGAGGTAAAAAGAG
ATAATAATACTTATGCACTTGCAAATGATGAAGGAAAAAGTAGTCTAAAAGGAGCTTTAAGGCTATACAAGAAAAAGAAT
ATAGAAAATGGTTGGAAATATACTAAATTTAAAGATAATAGAAGTCTAGGTGGAGAAAAGAGTAGAATAGTACAAGCTAT
AAATAATAAAACAGTTACAGTAGAACAATTGAAAAGATTAAAAGAAATAGACAGTATATTAGATAAAAATAACTATAAAA
CTACAAACAAAGAACAACGAGAAATAGAAGATTTACTATAA

Upstream 100 bases:

>100_bases
AAGGAGTAGAGACATATAAATACACAAAAAATAAGAAACTATTCTTAGCTTTAGTAGAATTTTATAATTAAAAATAATGA
TAAAGGAACGGTGATAAATT

Downstream 100 bases:

>100_bases
AAAAGAAAAATACAATTGTAACATCTTATAAAATCAAGCTTATTTTTTGAACACACTTTTTTGGTGTCCTCAATTTTAAC
TAAGCTAATTTTGAACACAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 306; Mature: 306

Protein sequence:

>306_residues
MERQGNFVKIPNCMIVGEETLIKKYGDKALIVYIYLENHRTLRNNVYISLGNCIEECGYKPDNHKGKTNDQFRKILLGFK
EKGIIETDVDLEKVKINDLIHCTMKEIDDKFFTIYDCELDKIIEYGKKDDKLNILKVFADIECRRHKNADNVNPETYSEY
EVAYPSYNQLCKDTLISSETSVKKYVNILVELGIIIVGNNGDRVNTITGEVKRDNNTYALANDEGKSSLKGALRLYKKKN
IENGWKYTKFKDNRSLGGEKSRIVQAINNKTVTVEQLKRLKEIDSILDKNNYKTTNKEQREIEDLL

Sequences:

>Translated_306_residues
MERQGNFVKIPNCMIVGEETLIKKYGDKALIVYIYLENHRTLRNNVYISLGNCIEECGYKPDNHKGKTNDQFRKILLGFK
EKGIIETDVDLEKVKINDLIHCTMKEIDDKFFTIYDCELDKIIEYGKKDDKLNILKVFADIECRRHKNADNVNPETYSEY
EVAYPSYNQLCKDTLISSETSVKKYVNILVELGIIIVGNNGDRVNTITGEVKRDNNTYALANDEGKSSLKGALRLYKKKN
IENGWKYTKFKDNRSLGGEKSRIVQAINNKTVTVEQLKRLKEIDSILDKNNYKTTNKEQREIEDLL
>Mature_306_residues
MERQGNFVKIPNCMIVGEETLIKKYGDKALIVYIYLENHRTLRNNVYISLGNCIEECGYKPDNHKGKTNDQFRKILLGFK
EKGIIETDVDLEKVKINDLIHCTMKEIDDKFFTIYDCELDKIIEYGKKDDKLNILKVFADIECRRHKNADNVNPETYSEY
EVAYPSYNQLCKDTLISSETSVKKYVNILVELGIIIVGNNGDRVNTITGEVKRDNNTYALANDEGKSSLKGALRLYKKKN
IENGWKYTKFKDNRSLGGEKSRIVQAINNKTVTVEQLKRLKEIDSILDKNNYKTTNKEQREIEDLL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35417; Mature: 35417

Theoretical pI: Translated: 8.23; Mature: 8.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERQGNFVKIPNCMIVGEETLIKKYGDKALIVYIYLENHRTLRNNVYISLGNCIEECGYK
CCCCCCEEECCCEEEECHHHHHHHCCCCEEEEEEEECCCEEEECCEEEEECHHHHHHCCC
PDNHKGKTNDQFRKILLGFKEKGIIETDVDLEKVKINDLIHCTMKEIDDKFFTIYDCELD
CCCCCCCCHHHHHHHHHHHHCCCCEECCCCHHEEEHHHHHHHHHHHCCCCEEEEEECCHH
KIIEYGKKDDKLNILKVFADIECRRHKNADNVNPETYSEYEVAYPSYNQLCKDTLISSET
HHHHCCCCCCCCCEEHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHCCHH
SVKKYVNILVELGIIIVGNNGDRVNTITGEVKRDNNTYALANDEGKSSLKGALRLYKKKN
HHHHHHHHHHHCCEEEECCCCCEEEEEECEEEECCCEEEEECCCCHHHHHHHHHHHHHCC
IENGWKYTKFKDNRSLGGEKSRIVQAINNKTVTVEQLKRLKEIDSILDKNNYKTTNKEQR
CCCCCCEEEECCCCCCCCHHHHHHHHHCCCEEEHHHHHHHHHHHHHHCCCCCCCCCHHHH
EIEDLL
HHHHCC
>Mature Secondary Structure
MERQGNFVKIPNCMIVGEETLIKKYGDKALIVYIYLENHRTLRNNVYISLGNCIEECGYK
CCCCCCEEECCCEEEECHHHHHHHCCCCEEEEEEEECCCEEEECCEEEEECHHHHHHCCC
PDNHKGKTNDQFRKILLGFKEKGIIETDVDLEKVKINDLIHCTMKEIDDKFFTIYDCELD
CCCCCCCCHHHHHHHHHHHHCCCCEECCCCHHEEEHHHHHHHHHHHCCCCEEEEEECCHH
KIIEYGKKDDKLNILKVFADIECRRHKNADNVNPETYSEYEVAYPSYNQLCKDTLISSET
HHHHCCCCCCCCCEEHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHCCHH
SVKKYVNILVELGIIIVGNNGDRVNTITGEVKRDNNTYALANDEGKSSLKGALRLYKKKN
HHHHHHHHHHHCCEEEECCCCCEEEEEECEEEECCCEEEEECCCCHHHHHHHHHHHHHCC
IENGWKYTKFKDNRSLGGEKSRIVQAINNKTVTVEQLKRLKEIDSILDKNNYKTTNKEQR
CCCCCCEEEECCCCCCCCHHHHHHHHHCCCEEEHHHHHHHHHHHHHHCCCCCCCCCHHHH
EIEDLL
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA