Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18309993

Identifier: 18309993

GI number: 18309993

Start: 1214739

End: 1214999

Strand: Direct

Name: 18309993

Synonym: CPE1011

Alternate gene names: NA

Gene position: 1214739-1214999 (Clockwise)

Preceding gene: 18309992

Following gene: 18309994

Centisome position: 40.07

GC content: 28.35

Gene sequence:

>261_bases
ATGCATGATTGGAGTATGTTAAAGAACTATAGATTATGGTTAGCTATCTTTGCTTTAATACCTTTAATACTTGAAGGGTT
CAATTTGAGCATTTTGCCGTCAAATTATAATGAAATAGTAACTTTATTTTTATCAATATTAGTTATGGGAGGAATATTAA
ATAATCCTAATCCTGATAAGGTAGAATTGAAAGAGAATAATGGATCAGAAAATTGCACAAAAAAAATAACTAGTTCAGAG
GGAGAAGAAGAGAAGAAATAG

Upstream 100 bases:

>100_bases
GAGAAGTTAAGTAATAAATCTTATTTTTTATTAGATAATAACCATAAAATCATGCTAAGAATATAATAAATTGTAGAATA
TTATAAAAGGAAGCGATTAT

Downstream 100 bases:

>100_bases
TAATAATCCATTGAATTTAAATTTTTGCTGTATTAAAATTAAAGTATCAGAAGTAATGTGTTGAAGAATAGGAGATGTTT
TATATGGCAAAAGAAATAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 86; Mature: 86

Protein sequence:

>86_residues
MHDWSMLKNYRLWLAIFALIPLILEGFNLSILPSNYNEIVTLFLSILVMGGILNNPNPDKVELKENNGSENCTKKITSSE
GEEEKK

Sequences:

>Translated_86_residues
MHDWSMLKNYRLWLAIFALIPLILEGFNLSILPSNYNEIVTLFLSILVMGGILNNPNPDKVELKENNGSENCTKKITSSE
GEEEKK
>Mature_86_residues
MHDWSMLKNYRLWLAIFALIPLILEGFNLSILPSNYNEIVTLFLSILVMGGILNNPNPDKVELKENNGSENCTKKITSSE
GEEEKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9781; Mature: 9781

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHDWSMLKNYRLWLAIFALIPLILEGFNLSILPSNYNEIVTLFLSILVMGGILNNPNPDK
CCCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCE
VELKENNGSENCTKKITSSEGEEEKK
EEEECCCCCHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MHDWSMLKNYRLWLAIFALIPLILEGFNLSILPSNYNEIVTLFLSILVMGGILNNPNPDK
CCCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCE
VELKENNGSENCTKKITSSEGEEEKK
EEEECCCCCHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA