| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is 18309992
Identifier: 18309992
GI number: 18309992
Start: 1214278
End: 1214613
Strand: Direct
Name: 18309992
Synonym: CPE1010
Alternate gene names: NA
Gene position: 1214278-1214613 (Clockwise)
Preceding gene: 18309991
Following gene: 18309993
Centisome position: 40.06
GC content: 22.92
Gene sequence:
>336_bases ATGCGTGGCAATATAAATTTACAGATGAGTAATTGGATTATCCTTGTGTCAACAATCTTGACAATAAAATATATTTTAGA GAATTTAATAGAGTTATGCAAGTTTAATAAAAAAATAGGATTAACAACTAAAAAGACCATAAAAAAAGTAATAGTATTTT TTATATTAACAGTAAGCATTGTTATTATTATAGGAATTACTTTCCCATATTTTAAGTGGAGGTTTTTAAATGCTGTCAGC ATTGGAAATCGTACATTAATAGTAGCTTTTACACAGCTTTTCTTTGGTATAATATTTACTTTATTTATAAATAGAAAAAA ATATAAAGTTAAATAA
Upstream 100 bases:
>100_bases AAAATTAAGGTGATTTTTTTTGAGAAAAAAATATTTTTGAAAATTAATTTAATAATTTAAGTATTAATATAAATAAGAAC TCAAGTAAAGGAACATTAAA
Downstream 100 bases:
>100_bases AGAATATATTTAAATTATTTTAAAAGAGAAGTTAAGTAATAAATCTTATTTTTTATTAGATAATAACCATAAAATCATGC TAAGAATATAATAAATTGTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 111; Mature: 111
Protein sequence:
>111_residues MRGNINLQMSNWIILVSTILTIKYILENLIELCKFNKKIGLTTKKTIKKVIVFFILTVSIVIIIGITFPYFKWRFLNAVS IGNRTLIVAFTQLFFGIIFTLFINRKKYKVK
Sequences:
>Translated_111_residues MRGNINLQMSNWIILVSTILTIKYILENLIELCKFNKKIGLTTKKTIKKVIVFFILTVSIVIIIGITFPYFKWRFLNAVS IGNRTLIVAFTQLFFGIIFTLFINRKKYKVK >Mature_111_residues MRGNINLQMSNWIILVSTILTIKYILENLIELCKFNKKIGLTTKKTIKKVIVFFILTVSIVIIIGITFPYFKWRFLNAVS IGNRTLIVAFTQLFFGIIFTLFINRKKYKVK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12994; Mature: 12994
Theoretical pI: Translated: 11.31; Mature: 11.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGNINLQMSNWIILVSTILTIKYILENLIELCKFNKKIGLTTKKTIKKVIVFFILTVSI CCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH VIIIGITFPYFKWRFLNAVSIGNRTLIVAFTQLFFGIIFTLFINRKKYKVK HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MRGNINLQMSNWIILVSTILTIKYILENLIELCKFNKKIGLTTKKTIKKVIVFFILTVSI CCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH VIIIGITFPYFKWRFLNAVSIGNRTLIVAFTQLFFGIIFTLFINRKKYKVK HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA