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The map label for this gene is 18309976

Identifier: 18309976

GI number: 18309976

Start: 1196919

End: 1197830

Strand: Reverse

Name: 18309976

Synonym: CPE0994

Alternate gene names: NA

Gene position: 1197830-1196919 (Counterclockwise)

Preceding gene: 18309983

Following gene: 18309974

Centisome position: 39.51

GC content: 28.07

Gene sequence:

>912_bases
ATGGAAAATAAAGAACTATTAGAAGAATGTACTCTTTGCACTAGAAACTGCAAAGTTAATAGATTTAAATCTCTTGGGGT
ATGTAAGGCTAGTGAAAAAGTTAAGGTAGCTAGAGCAGAACTTCATCCTTGGGAAGAACCTCCTATTTCCTTTAAGAATG
GATCTGGAACAGTATTTTTTTCTCATTGTAATTTAAAATGTGTTTTTTGCCAAAACCATGAAATAAGTCAAGATTTTAAA
GGACTTGAAATATCAATTGAAAGGTTAGCAGAAATCTTTTTAGAGCTTCAAGAAAAGGGAGCTGAAAATATAAACTTAGT
TACTCCAACACATTATGCAGTTCAAATAATAGAAGCTTTAAAAATAGCAAAAGAAAAAGGATTAAGTATTCCTATTCTCT
ATAATACTAATGGATATGATAGTTTAGAAACAATAAAGTTATTAGATGGTTACATAGATGTGTATCTTCCTGATTTTAAA
TATTTTAAGGATGATTATGCAATTAAATATTCAAAGATAAAAAATTATAAGGACAATTTAATTCCAGTATTAGATGAAAT
GTTTAGGCAAGTAGGTTCTCCAAAAATTTCAGAGGAAGGTAAACTTTTAAAGGGCATGATAATTAGACATTTAATGCTTC
CAGGTCTTTTATTTGATTCAAAGAAAGTTATAGACACTATATTTTCTAAATTTGGAGATGATGTTTATATAAGCATTATG
AATCAATATACTCCTATGAATAAGTCTTGTGATTATCCTGAAATAAATAAGCCTTTAAACCCTAAACATTATGAATCTCT
TATAGATTATGCAGCATCTTTAGGAGTTAAAAATGCATTTATACAAGAAAGTGGAACTAACTCAAAAGCCTATGTTCCTT
CATTTAAATATGAAGGAGTTATGAAAAAATAA

Upstream 100 bases:

>100_bases
CCATATAATGCCATAAATTACTATTTCTATTTTTAAGAATCTTGTTACTTAATTGCTTAAAATATATAATTAATATTGAA
TATAGATTAGAGGTGTTTTA

Downstream 100 bases:

>100_bases
ACTTTTAAATAGATTTTTTCTAAAAATAAAATAATTTCATAGGAAACACTTATTCCTATGAAATTATTTTATTTAATCTT
TCTATGTCTTTTATTATTAG

Product: radical SAM domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 303; Mature: 303

Protein sequence:

>303_residues
MENKELLEECTLCTRNCKVNRFKSLGVCKASEKVKVARAELHPWEEPPISFKNGSGTVFFSHCNLKCVFCQNHEISQDFK
GLEISIERLAEIFLELQEKGAENINLVTPTHYAVQIIEALKIAKEKGLSIPILYNTNGYDSLETIKLLDGYIDVYLPDFK
YFKDDYAIKYSKIKNYKDNLIPVLDEMFRQVGSPKISEEGKLLKGMIIRHLMLPGLLFDSKKVIDTIFSKFGDDVYISIM
NQYTPMNKSCDYPEINKPLNPKHYESLIDYAASLGVKNAFIQESGTNSKAYVPSFKYEGVMKK

Sequences:

>Translated_303_residues
MENKELLEECTLCTRNCKVNRFKSLGVCKASEKVKVARAELHPWEEPPISFKNGSGTVFFSHCNLKCVFCQNHEISQDFK
GLEISIERLAEIFLELQEKGAENINLVTPTHYAVQIIEALKIAKEKGLSIPILYNTNGYDSLETIKLLDGYIDVYLPDFK
YFKDDYAIKYSKIKNYKDNLIPVLDEMFRQVGSPKISEEGKLLKGMIIRHLMLPGLLFDSKKVIDTIFSKFGDDVYISIM
NQYTPMNKSCDYPEINKPLNPKHYESLIDYAASLGVKNAFIQESGTNSKAYVPSFKYEGVMKK
>Mature_303_residues
MENKELLEECTLCTRNCKVNRFKSLGVCKASEKVKVARAELHPWEEPPISFKNGSGTVFFSHCNLKCVFCQNHEISQDFK
GLEISIERLAEIFLELQEKGAENINLVTPTHYAVQIIEALKIAKEKGLSIPILYNTNGYDSLETIKLLDGYIDVYLPDFK
YFKDDYAIKYSKIKNYKDNLIPVLDEMFRQVGSPKISEEGKLLKGMIIRHLMLPGLLFDSKKVIDTIFSKFGDDVYISIM
NQYTPMNKSCDYPEINKPLNPKHYESLIDYAASLGVKNAFIQESGTNSKAYVPSFKYEGVMKK

Specific function: Unknown

COG id: COG1313

COG function: function code R; Uncharacterized Fe-S protein PflX, homolog of pyruvate formate lyase activating proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016431
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 34635; Mature: 34635

Theoretical pI: Translated: 7.40; Mature: 7.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENKELLEECTLCTRNCKVNRFKSLGVCKASEKVKVARAELHPWEEPPISFKNGSGTVFF
CCCHHHHHHHHHHHCCCCCHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCEECCCCEEEE
SHCNLKCVFCQNHEISQDFKGLEISIERLAEIFLELQEKGAENINLVTPTHYAVQIIEAL
EECCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHH
KIAKEKGLSIPILYNTNGYDSLETIKLLDGYIDVYLPDFKYFKDDYAIKYSKIKNYKDNL
HHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHEEECCCHHHHCCCCEEEHHHHHCCHHHH
IPVLDEMFRQVGSPKISEEGKLLKGMIIRHLMLPGLLFDSKKVIDTIFSKFGDDVYISIM
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHCCCCEEEEEH
NQYTPMNKSCDYPEINKPLNPKHYESLIDYAASLGVKNAFIQESGTNSKAYVPSFKYEGV
HHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHCCCCCCCEECCCCCCCCC
MKK
CCC
>Mature Secondary Structure
MENKELLEECTLCTRNCKVNRFKSLGVCKASEKVKVARAELHPWEEPPISFKNGSGTVFF
CCCHHHHHHHHHHHCCCCCHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCEECCCCEEEE
SHCNLKCVFCQNHEISQDFKGLEISIERLAEIFLELQEKGAENINLVTPTHYAVQIIEAL
EECCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHH
KIAKEKGLSIPILYNTNGYDSLETIKLLDGYIDVYLPDFKYFKDDYAIKYSKIKNYKDNL
HHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHEEECCCHHHHCCCCEEEHHHHHCCHHHH
IPVLDEMFRQVGSPKISEEGKLLKGMIIRHLMLPGLLFDSKKVIDTIFSKFGDDVYISIM
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHCCCCEEEEEH
NQYTPMNKSCDYPEINKPLNPKHYESLIDYAASLGVKNAFIQESGTNSKAYVPSFKYEGV
HHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHCCCCCCCEECCCCCCCCC
MKK
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]