| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is kup [H]
Identifier: 18309960
GI number: 18309960
Start: 1178435
End: 1179097
Strand: Reverse
Name: kup [H]
Synonym: CPE0978
Alternate gene names: 18309960
Gene position: 1179097-1178435 (Counterclockwise)
Preceding gene: 18309961
Following gene: 18309959
Centisome position: 38.9
GC content: 29.56
Gene sequence:
>663_bases ATGAGTACTAATAAAAGTTCTATTGAAAAAATTACTTTAGGAAGCTTTTTAATAGCCTTAGGAGTTGTTTATGGAGATAT TGGGACTTCTCCTCTTTATGTTATGAAATCAATAATAAATGGCAATGGAGGTTTAGAAAGCATTACTCCTGATTTTATCC TTGGAGTATTATCTCTTATTTTTTGGACTATGACTTTATTAACAACAATAAAGTATGTTCTTATAACCTTAAAGGCTGAT AATAAGGGAGAAGGAGGTATATTTTCTCTTTATACCTTAGTTCGTCGTCGTGCTAAGTGGCTTATTATCCCTGCCATGGT AGGCGGTTCTGCTCTGCTAGCTGATGGAATGCTAACCCCTGCAGTAACTGTTACTTCATCCATTGAAGGTTTAAAAATCT TACCTAATTTTAATGATATATTTGGAAATAATCAAGATATTATTATAATCATTGTACTAGTAATACTAAGTTTTTTATTC TTTATTCAACATTTTGGTACAGAAATAATAGGTAAAATCTTTGGACCAGTTATGTTTATTTGGTTTGCATTTTTAGCCAT ATTAGGAATTGTAAATTTATCAGGAAATTTATATCTTTTAAAAGCACTTTCTCCTCATTATGCAATAAAAATTTTATTTA GTCCAAATAACCATTTAGGTTAA
Upstream 100 bases:
>100_bases GTATAAATTTTATTAGATTTTAAATTTATGTGTACACATTAATAATTTATTAATATTTTAAGCTTAATAATTAACTTATG ATAATAAAGGAAGAATAAAT
Downstream 100 bases:
>100_bases ATTTAAATACTTGGCAGGAAGTATTTTTATCAACAACTGGAGCTGAAGCCTTGTACTCTGGATCTTGGTCATGTTGGTAG AAAAAATATCTATCTTACTT
Product: hypothetical protein
Products: K (I) [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 220; Mature: 219
Protein sequence:
>220_residues MSTNKSSIEKITLGSFLIALGVVYGDIGTSPLYVMKSIINGNGGLESITPDFILGVLSLIFWTMTLLTTIKYVLITLKAD NKGEGGIFSLYTLVRRRAKWLIIPAMVGGSALLADGMLTPAVTVTSSIEGLKILPNFNDIFGNNQDIIIIIVLVILSFLF FIQHFGTEIIGKIFGPVMFIWFAFLAILGIVNLSGNLYLLKALSPHYAIKILFSPNNHLG
Sequences:
>Translated_220_residues MSTNKSSIEKITLGSFLIALGVVYGDIGTSPLYVMKSIINGNGGLESITPDFILGVLSLIFWTMTLLTTIKYVLITLKAD NKGEGGIFSLYTLVRRRAKWLIIPAMVGGSALLADGMLTPAVTVTSSIEGLKILPNFNDIFGNNQDIIIIIVLVILSFLF FIQHFGTEIIGKIFGPVMFIWFAFLAILGIVNLSGNLYLLKALSPHYAIKILFSPNNHLG >Mature_219_residues STNKSSIEKITLGSFLIALGVVYGDIGTSPLYVMKSIINGNGGLESITPDFILGVLSLIFWTMTLLTTIKYVLITLKADN KGEGGIFSLYTLVRRRAKWLIIPAMVGGSALLADGMLTPAVTVTSSIEGLKILPNFNDIFGNNQDIIIIIVLVILSFLFF IQHFGTEIIGKIFGPVMFIWFAFLAILGIVNLSGNLYLLKALSPHYAIKILFSPNNHLG
Specific function: Transport of potassium into the cell [H]
COG id: COG3158
COG function: function code P; K+ transporter
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAK/KUP transporter (TC 2.A.72) family [H]
Homologues:
Organism=Escherichia coli, GI48994960, Length=216, Percent_Identity=40.7407407407407, Blast_Score=151, Evalue=4e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003855 - InterPro: IPR023051 [H]
Pfam domain/function: PF02705 K_trans [H]
EC number: NA
Molecular weight: Translated: 23956; Mature: 23825
Theoretical pI: Translated: 9.60; Mature: 9.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTNKSSIEKITLGSFLIALGVVYGDIGTSPLYVMKSIINGNGGLESITPDFILGVLSLI CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH FWTMTLLTTIKYVLITLKADNKGEGGIFSLYTLVRRRAKWLIIPAMVGGSALLADGMLTP HHHHHHHHHHHHHHEEEECCCCCCCCHHHHHHHHHHHCCEEEEEEHHCCHHHHHCCCCCC AVTVTSSIEGLKILPNFNDIFGNNQDIIIIIVLVILSFLFFIQHFGTEIIGKIFGPVMFI HHHHHCCCCCEEECCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WFAFLAILGIVNLSGNLYLLKALSPHYAIKILFSPNNHLG HHHHHHHHHHHCCCCCEEEEEECCCCEEEEEEECCCCCCC >Mature Secondary Structure STNKSSIEKITLGSFLIALGVVYGDIGTSPLYVMKSIINGNGGLESITPDFILGVLSLI CCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH FWTMTLLTTIKYVLITLKADNKGEGGIFSLYTLVRRRAKWLIIPAMVGGSALLADGMLTP HHHHHHHHHHHHHHEEEECCCCCCCCHHHHHHHHHHHCCEEEEEEHHCCHHHHHCCCCCC AVTVTSSIEGLKILPNFNDIFGNNQDIIIIIVLVILSFLFFIQHFGTEIIGKIFGPVMFI HHHHHCCCCCEEECCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WFAFLAILGIVNLSGNLYLLKALSPHYAIKILFSPNNHLG HHHHHHHHHHHCCCCCEEEEEECCCCEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: K (I) [Periplasm] [C]
Specific reaction: K (I) [Periplasm] = K (I) [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA