| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is kup [H]
Identifier: 18309959
GI number: 18309959
Start: 1177094
End: 1178044
Strand: Reverse
Name: kup [H]
Synonym: CPE0977
Alternate gene names: 18309959
Gene position: 1178044-1177094 (Counterclockwise)
Preceding gene: 18309960
Following gene: 18309956
Centisome position: 38.86
GC content: 27.55
Gene sequence:
>951_bases ATGCCAGCTATCAATAGAATACTTTGGATAGCTTGTATAGCTATAGTTTTATATTTTAGAAGTTCAGATAATATGGAAGC AGCTTATGGATTATCAATAACTGTAACAATGCTTATGACATCCATACTTTTATTCAATTACCTATTAAAAAGAAAAACCC CATTACCAATTGCACTAATTATACTAGTCTTCTTTGGCTCTTTAGAGTTTTCATTCTTAATTTCAAGTGCAGTTAAATTC GAAAAAGGTGGTTTTGTTTCAGTATTAATAGCCTTATGTATTTTAAGCATAATGTATATATGGATAAAAGGTCATTATAT AAAAATGAGTCTATTAGACTATATTCCTATTGAAAATTATAAAAATCAATTAAAGGAATTAAAGAATGATGTAGATAGAC CTAAATATGCAACAAATCTTGTTTATTTAACAAGTTCAGAAAAATCTAAAAGAATAGAAAGAAAAATAATGTACTCTATT TTAGATAAAAGGCCTAAGAGAGCAGATGTATATTGGTTTGTAAATGTAATTGTAACTGATGAACCTTATACAGCTGAATA TACTGTAAATACATTTGGTACTGATTATATGGTTAAGGTGCAACTTAAACTTGGTTTTAGGGTTAACCAAAAACTAAATG TATTTTTACGTCAAATAGTGTGTGAACTTATAAATAATGGTGATATTAAAGTTCAAAATAGAAAGTACACTACACTTCCT AACAGAAATGTAGGAGATTTCAGATTTATTCTTATAAATGAATGTTTATCATCAGAAAGCAAGCTTAAATCATGGAATTC AATGATAATTAGATCTAAGCTTTTCATAAAAAAATTCACAGTTTCTCCAGCTAAATGGTTCGGCCTTGAATCTAGTGAAA TTGAAGTTGAAAATGTTCCTTTAATATTAGGCTCTACTGAACACACCACTCTAAAACGTGTTTATAAATAA
Upstream 100 bases:
>100_bases AATTTCAGGTTCATATACCTTAGTTTCAGAAGCTATTAAATTAAATTTATTCCCTAGATTACAATGTCTTTATCCTTCTA ATTCTAAGGGACAAATTTAC
Downstream 100 bases:
>100_bases AGGACTTTCATCAAAATAACTTTTCATAAAACTTACAAACAGTATTTTTTCATATTGTTTGTAAGTTTTATTGTTATTTC TTGATAAAAGCCCTATTATT
Product: hypothetical protein
Products: K (I) [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 316; Mature: 315
Protein sequence:
>316_residues MPAINRILWIACIAIVLYFRSSDNMEAAYGLSITVTMLMTSILLFNYLLKRKTPLPIALIILVFFGSLEFSFLISSAVKF EKGGFVSVLIALCILSIMYIWIKGHYIKMSLLDYIPIENYKNQLKELKNDVDRPKYATNLVYLTSSEKSKRIERKIMYSI LDKRPKRADVYWFVNVIVTDEPYTAEYTVNTFGTDYMVKVQLKLGFRVNQKLNVFLRQIVCELINNGDIKVQNRKYTTLP NRNVGDFRFILINECLSSESKLKSWNSMIIRSKLFIKKFTVSPAKWFGLESSEIEVENVPLILGSTEHTTLKRVYK
Sequences:
>Translated_316_residues MPAINRILWIACIAIVLYFRSSDNMEAAYGLSITVTMLMTSILLFNYLLKRKTPLPIALIILVFFGSLEFSFLISSAVKF EKGGFVSVLIALCILSIMYIWIKGHYIKMSLLDYIPIENYKNQLKELKNDVDRPKYATNLVYLTSSEKSKRIERKIMYSI LDKRPKRADVYWFVNVIVTDEPYTAEYTVNTFGTDYMVKVQLKLGFRVNQKLNVFLRQIVCELINNGDIKVQNRKYTTLP NRNVGDFRFILINECLSSESKLKSWNSMIIRSKLFIKKFTVSPAKWFGLESSEIEVENVPLILGSTEHTTLKRVYK >Mature_315_residues PAINRILWIACIAIVLYFRSSDNMEAAYGLSITVTMLMTSILLFNYLLKRKTPLPIALIILVFFGSLEFSFLISSAVKFE KGGFVSVLIALCILSIMYIWIKGHYIKMSLLDYIPIENYKNQLKELKNDVDRPKYATNLVYLTSSEKSKRIERKIMYSIL DKRPKRADVYWFVNVIVTDEPYTAEYTVNTFGTDYMVKVQLKLGFRVNQKLNVFLRQIVCELINNGDIKVQNRKYTTLPN RNVGDFRFILINECLSSESKLKSWNSMIIRSKLFIKKFTVSPAKWFGLESSEIEVENVPLILGSTEHTTLKRVYK
Specific function: Transport of potassium into the cell [H]
COG id: COG3158
COG function: function code P; K+ transporter
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAK/KUP transporter (TC 2.A.72) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003855 - InterPro: IPR023051 [H]
Pfam domain/function: PF02705 K_trans [H]
EC number: NA
Molecular weight: Translated: 36664; Mature: 36533
Theoretical pI: Translated: 10.01; Mature: 10.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAINRILWIACIAIVLYFRSSDNMEAAYGLSITVTMLMTSILLFNYLLKRKTPLPIALI CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH ILVFFGSLEFSFLISSAVKFEKGGFVSVLIALCILSIMYIWIKGHYIKMSLLDYIPIENY HHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHCCCHHH KNQLKELKNDVDRPKYATNLVYLTSSEKSKRIERKIMYSILDKRPKRADVYWFVNVIVTD HHHHHHHHHHCCCCCHHEEEEEEECCHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEC EPYTAEYTVNTFGTDYMVKVQLKLGFRVNQKLNVFLRQIVCELINNGDIKVQNRKYTTLP CCCEEEEEEEECCCCEEEEEEEEECEEECHHHHHHHHHHHHHHHCCCCEEEECCEEEECC NRNVGDFRFILINECLSSESKLKSWNSMIIRSKLFIKKFTVSPAKWFGLESSEIEVENVP CCCCCCEEEEEEHHHHCCHHHHHHHHHHHHHHHHHHHHEECCCHHHCCCCCCCEEEECCC LILGSTEHTTLKRVYK EEEECCCHHHHHHHCC >Mature Secondary Structure PAINRILWIACIAIVLYFRSSDNMEAAYGLSITVTMLMTSILLFNYLLKRKTPLPIALI CHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH ILVFFGSLEFSFLISSAVKFEKGGFVSVLIALCILSIMYIWIKGHYIKMSLLDYIPIENY HHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHCCCHHH KNQLKELKNDVDRPKYATNLVYLTSSEKSKRIERKIMYSILDKRPKRADVYWFVNVIVTD HHHHHHHHHHCCCCCHHEEEEEEECCHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEC EPYTAEYTVNTFGTDYMVKVQLKLGFRVNQKLNVFLRQIVCELINNGDIKVQNRKYTTLP CCCEEEEEEEECCCCEEEEEEEEECEEECHHHHHHHHHHHHHHHCCCCEEEECCEEEECC NRNVGDFRFILINECLSSESKLKSWNSMIIRSKLFIKKFTVSPAKWFGLESSEIEVENVP CCCCCCEEEEEEHHHHCCHHHHHHHHHHHHHHHHHHHHEECCCHHHCCCCCCCEEEECCC LILGSTEHTTLKRVYK EEEECCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: K (I) [Periplasm] [C]
Specific reaction: K (I) [Periplasm] = K (I) [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA