| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is 18309807
Identifier: 18309807
GI number: 18309807
Start: 1009036
End: 1009410
Strand: Direct
Name: 18309807
Synonym: CPE0825
Alternate gene names: NA
Gene position: 1009036-1009410 (Clockwise)
Preceding gene: 18309806
Following gene: 18309808
Centisome position: 33.29
GC content: 29.07
Gene sequence:
>375_bases ATGGTTCAATCACTTAATACAAAGGTGGATTTAGTAGTTGATGCAACATCTTTTTCAGGTCTTGCTGATTATGGACAAAT AATGATTGGTGATAAAGGATTTGAATTTTATAATTCTAATGATTATAGAAAGTTTATTCAAATTCCTTGGGAAGAAGTTG ACTATGTAATTGCATCAGTTATGTTCAAAGGAAAGTGGATTCCACGATATGCAATTAAAACTAAGAAAAATGGTACATAT TCATTTTCTTCTAAAGACGCAAAGAAAGTACTTCGTACTGTTAGAAAATATGTTGATGCAAATCGTATAGTTAAGTCATT AAGTTTCTTTGATGTTGTAAAAAGAGAGGTAAAAGCACTATTTAAGAAGAAATAA
Upstream 100 bases:
>100_bases AAAGAGCCTTTATAAAAAATTTTCATAAGAACTATTTATTTTGAAAAGAAATACTTAAGCAAAATAAGTTTATATATTTA ATTAGAAAAGAGGTAGATCT
Downstream 100 bases:
>100_bases TTTAAAGTTTTTTTGTGTAATAAATTCTATGTAAATTTATAAAATTAAGTATAAAAGCAAATATGTTTTAATATTCTTTA AATTAATAAAGTTTATTATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 124; Mature: 124
Protein sequence:
>124_residues MVQSLNTKVDLVVDATSFSGLADYGQIMIGDKGFEFYNSNDYRKFIQIPWEEVDYVIASVMFKGKWIPRYAIKTKKNGTY SFSSKDAKKVLRTVRKYVDANRIVKSLSFFDVVKREVKALFKKK
Sequences:
>Translated_124_residues MVQSLNTKVDLVVDATSFSGLADYGQIMIGDKGFEFYNSNDYRKFIQIPWEEVDYVIASVMFKGKWIPRYAIKTKKNGTY SFSSKDAKKVLRTVRKYVDANRIVKSLSFFDVVKREVKALFKKK >Mature_124_residues MVQSLNTKVDLVVDATSFSGLADYGQIMIGDKGFEFYNSNDYRKFIQIPWEEVDYVIASVMFKGKWIPRYAIKTKKNGTY SFSSKDAKKVLRTVRKYVDANRIVKSLSFFDVVKREVKALFKKK
Specific function: Unknown
COG id: COG4687
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14385; Mature: 14385
Theoretical pI: Translated: 10.41; Mature: 10.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVQSLNTKVDLVVDATSFSGLADYGQIMIGDKGFEFYNSNDYRKFIQIPWEEVDYVIASV CCCCCCCEEEEEEECCCCCCCCCCCEEEECCCCCCCCCCCCCHHHEECCHHHHHHHHHHH MFKGKWIPRYAIKTKKNGTYSFSSKDAKKVLRTVRKYVDANRIVKSLSFFDVVKREVKAL HHCCCCCCHHEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FKKK HCCC >Mature Secondary Structure MVQSLNTKVDLVVDATSFSGLADYGQIMIGDKGFEFYNSNDYRKFIQIPWEEVDYVIASV CCCCCCCEEEEEEECCCCCCCCCCCEEEECCCCCCCCCCCCCHHHEECCHHHHHHHHHHH MFKGKWIPRYAIKTKKNGTYSFSSKDAKKVLRTVRKYVDANRIVKSLSFFDVVKREVKAL HHCCCCCCHHEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FKKK HCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA