Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

Click here to switch to the map view.

The map label for this gene is manZ [H]

Identifier: 18309805

GI number: 18309805

Start: 1007953

End: 1008444

Strand: Direct

Name: manZ [H]

Synonym: CPE0823

Alternate gene names: 18309805

Gene position: 1007953-1008444 (Clockwise)

Preceding gene: 18309804

Following gene: 18309806

Centisome position: 33.25

GC content: 35.77

Gene sequence:

>492_bases
ATGGAGAAAAATTTAAAATTAACAAAAAAAGATCGTCTTTCTATTTGGTGGCGTTCAACTTTCATTCAAGGATCTTGGAA
CTATGAAAGAATGCAAAATGGTGGTTGGGCATTCTCATTAATTCCTGCAATCAAAAAATTATACAAAACTAAAGAAGAAA
GATCAGCGGCATTAACACGTCACTTAGAATTCTTCAACACTCACCCATATGTAGCTTCACCTATCATTGGTGTAACATTA
GCATTAGAAGAAGATCGTGCAAATGGAGCTCAAGTAGATGATGTAACTATTCAAGGGGTTAAAGTTGTTATGATGGGACC
TTTAGCAGGTATCGGAGACCCTGTATTCTGGTTTACTGTTAGACCTATATTAGGAGCATTAGGTGCTTCACTTGCTATGG
CTGGTAACCATATTAGGACCAATAATATTCTTCTTAGGTTGGAATATTATCCGTATGGCATTTACTTGGTACACACAAGA
ATTTGGTTATAA

Upstream 100 bases:

>100_bases
GCACTTAGCAAAAAAGGTGGCTCAGGTAATGGTGGATCAAACATAGGAGATCCAGTAGGCGATATTATCGATAGATACTA
AGAAGGGAGAGAAGACGAAA

Downstream 100 bases:

>100_bases
AGCTGGTTCTCGTATTACAGAGGACTTATCAGGAAACTTATTACAAGATATTACAAAAGGTGCATCTATACTTGGTATGT
TTATATTAGGATCACTAGTT

Product: PTS system

Products: protein histidine; sugar phosphate; D-glucosamine-6-phosphate [Cytoplasm]; pyruvate; glucose-6-phosphate [Cytoplasm]; N-acetyl-D-glucosamine-6-phosphate [Cytoplasm]; mannose-6-phosphate [Cytoplasm]; fructose-6-phosphate [Cytoplasm] [C]

Alternate protein names: EII-M-Man; EIID-Man; PTS system mannose-specific EIID component [H]

Number of amino acids: Translated: 163; Mature: 163

Protein sequence:

>163_residues
MEKNLKLTKKDRLSIWWRSTFIQGSWNYERMQNGGWAFSLIPAIKKLYKTKEERSAALTRHLEFFNTHPYVASPIIGVTL
ALEEDRANGAQVDDVTIQGVKVVMMGPLAGIGDPVFWFTVRPILGALGASLAMAGNHIRTNNILLRLEYYPYGIYLVHTR
IWL

Sequences:

>Translated_163_residues
MEKNLKLTKKDRLSIWWRSTFIQGSWNYERMQNGGWAFSLIPAIKKLYKTKEERSAALTRHLEFFNTHPYVASPIIGVTL
ALEEDRANGAQVDDVTIQGVKVVMMGPLAGIGDPVFWFTVRPILGALGASLAMAGNHIRTNNILLRLEYYPYGIYLVHTR
IWL
>Mature_163_residues
MEKNLKLTKKDRLSIWWRSTFIQGSWNYERMQNGGWAFSLIPAIKKLYKTKEERSAALTRHLEFFNTHPYVASPIIGVTL
ALEEDRANGAQVDDVTIQGVKVVMMGPLAGIGDPVFWFTVRPILGALGASLAMAGNHIRTNNILLRLEYYPYGIYLVHTR
IWL

Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane. This system i

COG id: COG3716

COG function: function code G; Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PTS EIID domain [H]

Homologues:

Organism=Escherichia coli, GI1788122, Length=132, Percent_Identity=60.6060606060606, Blast_Score=178, Evalue=1e-46,
Organism=Escherichia coli, GI1789529, Length=132, Percent_Identity=43.1818181818182, Blast_Score=119, Evalue=1e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004704
- InterPro:   IPR018405 [H]

Pfam domain/function: PF03613 EIID-AGA [H]

EC number: NA

Molecular weight: Translated: 18580; Mature: 18580

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: PS51108 PTS_EIID

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKNLKLTKKDRLSIWWRSTFIQGSWNYERMQNGGWAFSLIPAIKKLYKTKEERSAALTR
CCCCCCCCCCCCEEEEEEEEEEECCCCHHHHCCCCEEEEHHHHHHHHHHCHHHHHHHHHH
HLEFFNTHPYVASPIIGVTLALEEDRANGAQVDDVTIQGVKVVMMGPLAGIGDPVFWFTV
HHHHHCCCCCCCCCCEEEEEEEECCCCCCCEECCEEECCEEEEEECCCCCCCCCHHEEEH
RPILGALGASLAMAGNHIRTNNILLRLEYYPYGIYLVHTRIWL
HHHHHHHHHHHHHCCCEEECCCEEEEEEECCCEEEEEEEEECC
>Mature Secondary Structure
MEKNLKLTKKDRLSIWWRSTFIQGSWNYERMQNGGWAFSLIPAIKKLYKTKEERSAALTR
CCCCCCCCCCCCEEEEEEEEEEECCCCHHHHCCCCEEEEHHHHHHHHHHCHHHHHHHHHH
HLEFFNTHPYVASPIIGVTLALEEDRANGAQVDDVTIQGVKVVMMGPLAGIGDPVFWFTV
HHHHHCCCCCCCCCCEEEEEEEECCCCCCCEECCEEECCEEEEEECCCCCCCCCHHEEEH
RPILGALGASLAMAGNHIRTNNILLRLEYYPYGIYLVHTRIWL
HHHHHHHHHHHHHCCCEEECCCEEEEEEECCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: protein N p -phosphohistidine; sugar; phosphoenolpyruvate; glucosamine [Periplasm]; phosphoenolpyruvate; beta-D-glucose [Periplasm]; N-acetyl-D-glucosamine [Periplasm]; mannose [Periplasm]; fructose [Periplasm] [C]

Specific reaction: protein N p -phosphohistidine + sugar = protein histidine + sugar phosphate phosphoenolpyruvate + glucosamine [Periplasm] = D-glucosamine-6-phosphate [Cytoplasm] + pyruvate phosphoenolpyruvate + beta-D-glucose [Periplasm] = glucose-6-phosphate [Cytoplasm]

General reaction: Transferring phosphorus-containing groups; Phosphotransferases with an alcohol group as acceptor [C]

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]