Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is fliB [H]

Identifier: 18309781

GI number: 18309781

Start: 982027

End: 983271

Strand: Direct

Name: fliB [H]

Synonym: CPE0799

Alternate gene names: 18309781

Gene position: 982027-983271 (Clockwise)

Preceding gene: 18309780

Following gene: 18309783

Centisome position: 32.39

GC content: 26.83

Gene sequence:

>1245_bases
ATGAAGAATATTAAAATGAGATATCCAATATATCTTAAAGAGTTTAAGTGTATTGGGGGAGAATGTGAAGATAGCTGTTG
TATAGGCTGGGATGTTGATATTGATAAGTTTACTTTTTATCAATATGAAAATGTAAGTAATAGTGATATGAAGAATATAC
TTGAAAGCAATCTTATTAAAAATAAGAAGTGTCAATGTGATGAAATTGATTTTGCTAAAGTGAAGCTAGGGGAAAGCAAA
AGATGTCCATTTTTAAAGTGTGATAACTACTGTGTTATCCATTCTAATCTTGGAGAAGAGTATCTTTCAAATGTTTGTAC
ATCATTTCCTAGGGTAACTAATAAGATTGATGGAATTTATGAAATGTCTCTTGCTGTAGCATGTCCAGAGGCTGCTAGAA
TCCTTTTACTTAAGAAGAATGGTATTGAGTTTTCAGAAAGTGACGAAAACTTAGGGAAACATATAATATCAAGTGAGGTT
AACACTAAACTAAGTGAAGAGGCCTATCTTCCAGTAGAGTTTCTTAAGGAAATTAGAGAGACTAGTATAAAGATAATGAA
AAATAGAAAGTTTTCATTAGATAAAAGGCTTTACATATTAGGTGAATTTATAAATGCTTTAGAGGATGAGTATGAGTATA
ATTGCCATAATACTTTAAGTTTTATAAGGGAATATGATATAGATACTGTTAAAGATTCATACGAAGAAAACTCTATGAAT
TATATTATTCAGGTTGATTTCTTTAAGAAATTACTTACTATGCTTAGGGTAGAAAAAGATATAGATAGTGATAGATTTAA
GGAGTACTCAAAGGAAGTTAAAATTGGGCTTAATTTAGATGAAGAAAATTATTTAGCTAAAAATGCTCAAATGTATATAA
AGGCTTTTGAAGAATATGAAAAAGAATTTATAGAAGAAAATACTTATATATTTGAAAATTACATAGTTAATTTTATTTAT
AGCAATTTATTCCCATTCTGTGAGAGAGAATCAATATTTGATAGCTATATTATGTTGCTTATAAGATATACATTTATGAG
ATTTTATTTAGTTGGTATGTATATATATCATAAGAAAAATAAAGAGGATTTCAATAAATCTCTTTCAAAAGAAGAAGTAG
TAAGATTTATTCAGTGTTTCTCAAAGGTTGTAGAACATCATAAAACTTATTTAATTGACTTATTAAATTATATAAAAGAG
CATGATTTTAATAATTTAGAGTTTGTGAAAACTTTGCTACCTTAA

Upstream 100 bases:

>100_bases
TTTAATATAAAAAGATTTAATTTAAATTTTCAATGGTATAATATGGTGTGATAAAATAATTAAGTGAATTAAATTATTTT
ATCTAAGAGGGAAGTATATA

Downstream 100 bases:

>100_bases
TTAAAGTGATAGATGTAAATTTAACTTCGTCCTATGTACATTTAGGATGGAGTTTTTTATTACATTGGGATTAAAAATAT
AGGTAAAGCTTAAAATAATA

Product: hypothetical protein

Products: NA

Alternate protein names: Lysine N-methyltransferase [H]

Number of amino acids: Translated: 414; Mature: 414

Protein sequence:

>414_residues
MKNIKMRYPIYLKEFKCIGGECEDSCCIGWDVDIDKFTFYQYENVSNSDMKNILESNLIKNKKCQCDEIDFAKVKLGESK
RCPFLKCDNYCVIHSNLGEEYLSNVCTSFPRVTNKIDGIYEMSLAVACPEAARILLLKKNGIEFSESDENLGKHIISSEV
NTKLSEEAYLPVEFLKEIRETSIKIMKNRKFSLDKRLYILGEFINALEDEYEYNCHNTLSFIREYDIDTVKDSYEENSMN
YIIQVDFFKKLLTMLRVEKDIDSDRFKEYSKEVKIGLNLDEENYLAKNAQMYIKAFEEYEKEFIEENTYIFENYIVNFIY
SNLFPFCERESIFDSYIMLLIRYTFMRFYLVGMYIYHKKNKEDFNKSLSKEEVVRFIQCFSKVVEHHKTYLIDLLNYIKE
HDFNNLEFVKTLLP

Sequences:

>Translated_414_residues
MKNIKMRYPIYLKEFKCIGGECEDSCCIGWDVDIDKFTFYQYENVSNSDMKNILESNLIKNKKCQCDEIDFAKVKLGESK
RCPFLKCDNYCVIHSNLGEEYLSNVCTSFPRVTNKIDGIYEMSLAVACPEAARILLLKKNGIEFSESDENLGKHIISSEV
NTKLSEEAYLPVEFLKEIRETSIKIMKNRKFSLDKRLYILGEFINALEDEYEYNCHNTLSFIREYDIDTVKDSYEENSMN
YIIQVDFFKKLLTMLRVEKDIDSDRFKEYSKEVKIGLNLDEENYLAKNAQMYIKAFEEYEKEFIEENTYIFENYIVNFIY
SNLFPFCERESIFDSYIMLLIRYTFMRFYLVGMYIYHKKNKEDFNKSLSKEEVVRFIQCFSKVVEHHKTYLIDLLNYIKE
HDFNNLEFVKTLLP
>Mature_414_residues
MKNIKMRYPIYLKEFKCIGGECEDSCCIGWDVDIDKFTFYQYENVSNSDMKNILESNLIKNKKCQCDEIDFAKVKLGESK
RCPFLKCDNYCVIHSNLGEEYLSNVCTSFPRVTNKIDGIYEMSLAVACPEAARILLLKKNGIEFSESDENLGKHIISSEV
NTKLSEEAYLPVEFLKEIRETSIKIMKNRKFSLDKRLYILGEFINALEDEYEYNCHNTLSFIREYDIDTVKDSYEENSMN
YIIQVDFFKKLLTMLRVEKDIDSDRFKEYSKEVKIGLNLDEENYLAKNAQMYIKAFEEYEKEFIEENTYIFENYIVNFIY
SNLFPFCERESIFDSYIMLLIRYTFMRFYLVGMYIYHKKNKEDFNKSLSKEEVVRFIQCFSKVVEHHKTYLIDLLNYIKE
HDFNNLEFVKTLLP

Specific function: Post-translationally modifies flagellin by methylation of epsilon amino group of surface-exposed lysine residues [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020193
- ProDom:   PD035357 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49372; Mature: 49372

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNIKMRYPIYLKEFKCIGGECEDSCCIGWDVDIDKFTFYQYENVSNSDMKNILESNLIK
CCCCCEECCCCEEHHHHCCCCCCCCEEEECCCCCCCEEEEEECCCCCHHHHHHHHHHHHC
NKKCQCDEIDFAKVKLGESKRCPFLKCDNYCVIHSNLGEEYLSNVCTSFPRVTNKIDGIY
CCCCCCCCCCHHEEECCCCCCCCEEECCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCHH
EMSLAVACPEAARILLLKKNGIEFSESDENLGKHIISSEVNTKLSEEAYLPVEFLKEIRE
HHHHHHCCCHHHEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
TSIKIMKNRKFSLDKRLYILGEFINALEDEYEYNCHNTLSFIREYDIDTVKDSYEENSMN
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHCCCCCE
YIIQVDFFKKLLTMLRVEKDIDSDRFKEYSKEVKIGLNLDEENYLAKNAQMYIKAFEEYE
EEEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHH
KEFIEENTYIFENYIVNFIYSNLFPFCERESIFDSYIMLLIRYTFMRFYLVGMYIYHKKN
HHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
KEDFNKSLSKEEVVRFIQCFSKVVEHHKTYLIDLLNYIKEHDFNNLEFVKTLLP
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCC
>Mature Secondary Structure
MKNIKMRYPIYLKEFKCIGGECEDSCCIGWDVDIDKFTFYQYENVSNSDMKNILESNLIK
CCCCCEECCCCEEHHHHCCCCCCCCEEEECCCCCCCEEEEEECCCCCHHHHHHHHHHHHC
NKKCQCDEIDFAKVKLGESKRCPFLKCDNYCVIHSNLGEEYLSNVCTSFPRVTNKIDGIY
CCCCCCCCCCHHEEECCCCCCCCEEECCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCHH
EMSLAVACPEAARILLLKKNGIEFSESDENLGKHIISSEVNTKLSEEAYLPVEFLKEIRE
HHHHHHCCCHHHEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
TSIKIMKNRKFSLDKRLYILGEFINALEDEYEYNCHNTLSFIREYDIDTVKDSYEENSMN
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHCCCCCE
YIIQVDFFKKLLTMLRVEKDIDSDRFKEYSKEVKIGLNLDEENYLAKNAQMYIKAFEEYE
EEEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHH
KEFIEENTYIFENYIVNFIYSNLFPFCERESIFDSYIMLLIRYTFMRFYLVGMYIYHKKN
HHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
KEDFNKSLSKEEVVRFIQCFSKVVEHHKTYLIDLLNYIKEHDFNNLEFVKTLLP
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11142406 [H]