| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
Click here to switch to the map view.
The map label for this gene is fliB [H]
Identifier: 18309781
GI number: 18309781
Start: 982027
End: 983271
Strand: Direct
Name: fliB [H]
Synonym: CPE0799
Alternate gene names: 18309781
Gene position: 982027-983271 (Clockwise)
Preceding gene: 18309780
Following gene: 18309783
Centisome position: 32.39
GC content: 26.83
Gene sequence:
>1245_bases ATGAAGAATATTAAAATGAGATATCCAATATATCTTAAAGAGTTTAAGTGTATTGGGGGAGAATGTGAAGATAGCTGTTG TATAGGCTGGGATGTTGATATTGATAAGTTTACTTTTTATCAATATGAAAATGTAAGTAATAGTGATATGAAGAATATAC TTGAAAGCAATCTTATTAAAAATAAGAAGTGTCAATGTGATGAAATTGATTTTGCTAAAGTGAAGCTAGGGGAAAGCAAA AGATGTCCATTTTTAAAGTGTGATAACTACTGTGTTATCCATTCTAATCTTGGAGAAGAGTATCTTTCAAATGTTTGTAC ATCATTTCCTAGGGTAACTAATAAGATTGATGGAATTTATGAAATGTCTCTTGCTGTAGCATGTCCAGAGGCTGCTAGAA TCCTTTTACTTAAGAAGAATGGTATTGAGTTTTCAGAAAGTGACGAAAACTTAGGGAAACATATAATATCAAGTGAGGTT AACACTAAACTAAGTGAAGAGGCCTATCTTCCAGTAGAGTTTCTTAAGGAAATTAGAGAGACTAGTATAAAGATAATGAA AAATAGAAAGTTTTCATTAGATAAAAGGCTTTACATATTAGGTGAATTTATAAATGCTTTAGAGGATGAGTATGAGTATA ATTGCCATAATACTTTAAGTTTTATAAGGGAATATGATATAGATACTGTTAAAGATTCATACGAAGAAAACTCTATGAAT TATATTATTCAGGTTGATTTCTTTAAGAAATTACTTACTATGCTTAGGGTAGAAAAAGATATAGATAGTGATAGATTTAA GGAGTACTCAAAGGAAGTTAAAATTGGGCTTAATTTAGATGAAGAAAATTATTTAGCTAAAAATGCTCAAATGTATATAA AGGCTTTTGAAGAATATGAAAAAGAATTTATAGAAGAAAATACTTATATATTTGAAAATTACATAGTTAATTTTATTTAT AGCAATTTATTCCCATTCTGTGAGAGAGAATCAATATTTGATAGCTATATTATGTTGCTTATAAGATATACATTTATGAG ATTTTATTTAGTTGGTATGTATATATATCATAAGAAAAATAAAGAGGATTTCAATAAATCTCTTTCAAAAGAAGAAGTAG TAAGATTTATTCAGTGTTTCTCAAAGGTTGTAGAACATCATAAAACTTATTTAATTGACTTATTAAATTATATAAAAGAG CATGATTTTAATAATTTAGAGTTTGTGAAAACTTTGCTACCTTAA
Upstream 100 bases:
>100_bases TTTAATATAAAAAGATTTAATTTAAATTTTCAATGGTATAATATGGTGTGATAAAATAATTAAGTGAATTAAATTATTTT ATCTAAGAGGGAAGTATATA
Downstream 100 bases:
>100_bases TTAAAGTGATAGATGTAAATTTAACTTCGTCCTATGTACATTTAGGATGGAGTTTTTTATTACATTGGGATTAAAAATAT AGGTAAAGCTTAAAATAATA
Product: hypothetical protein
Products: NA
Alternate protein names: Lysine N-methyltransferase [H]
Number of amino acids: Translated: 414; Mature: 414
Protein sequence:
>414_residues MKNIKMRYPIYLKEFKCIGGECEDSCCIGWDVDIDKFTFYQYENVSNSDMKNILESNLIKNKKCQCDEIDFAKVKLGESK RCPFLKCDNYCVIHSNLGEEYLSNVCTSFPRVTNKIDGIYEMSLAVACPEAARILLLKKNGIEFSESDENLGKHIISSEV NTKLSEEAYLPVEFLKEIRETSIKIMKNRKFSLDKRLYILGEFINALEDEYEYNCHNTLSFIREYDIDTVKDSYEENSMN YIIQVDFFKKLLTMLRVEKDIDSDRFKEYSKEVKIGLNLDEENYLAKNAQMYIKAFEEYEKEFIEENTYIFENYIVNFIY SNLFPFCERESIFDSYIMLLIRYTFMRFYLVGMYIYHKKNKEDFNKSLSKEEVVRFIQCFSKVVEHHKTYLIDLLNYIKE HDFNNLEFVKTLLP
Sequences:
>Translated_414_residues MKNIKMRYPIYLKEFKCIGGECEDSCCIGWDVDIDKFTFYQYENVSNSDMKNILESNLIKNKKCQCDEIDFAKVKLGESK RCPFLKCDNYCVIHSNLGEEYLSNVCTSFPRVTNKIDGIYEMSLAVACPEAARILLLKKNGIEFSESDENLGKHIISSEV NTKLSEEAYLPVEFLKEIRETSIKIMKNRKFSLDKRLYILGEFINALEDEYEYNCHNTLSFIREYDIDTVKDSYEENSMN YIIQVDFFKKLLTMLRVEKDIDSDRFKEYSKEVKIGLNLDEENYLAKNAQMYIKAFEEYEKEFIEENTYIFENYIVNFIY SNLFPFCERESIFDSYIMLLIRYTFMRFYLVGMYIYHKKNKEDFNKSLSKEEVVRFIQCFSKVVEHHKTYLIDLLNYIKE HDFNNLEFVKTLLP >Mature_414_residues MKNIKMRYPIYLKEFKCIGGECEDSCCIGWDVDIDKFTFYQYENVSNSDMKNILESNLIKNKKCQCDEIDFAKVKLGESK RCPFLKCDNYCVIHSNLGEEYLSNVCTSFPRVTNKIDGIYEMSLAVACPEAARILLLKKNGIEFSESDENLGKHIISSEV NTKLSEEAYLPVEFLKEIRETSIKIMKNRKFSLDKRLYILGEFINALEDEYEYNCHNTLSFIREYDIDTVKDSYEENSMN YIIQVDFFKKLLTMLRVEKDIDSDRFKEYSKEVKIGLNLDEENYLAKNAQMYIKAFEEYEKEFIEENTYIFENYIVNFIY SNLFPFCERESIFDSYIMLLIRYTFMRFYLVGMYIYHKKNKEDFNKSLSKEEVVRFIQCFSKVVEHHKTYLIDLLNYIKE HDFNNLEFVKTLLP
Specific function: Post-translationally modifies flagellin by methylation of epsilon amino group of surface-exposed lysine residues [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the fliB family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020193 - ProDom: PD035357 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49372; Mature: 49372
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNIKMRYPIYLKEFKCIGGECEDSCCIGWDVDIDKFTFYQYENVSNSDMKNILESNLIK CCCCCEECCCCEEHHHHCCCCCCCCEEEECCCCCCCEEEEEECCCCCHHHHHHHHHHHHC NKKCQCDEIDFAKVKLGESKRCPFLKCDNYCVIHSNLGEEYLSNVCTSFPRVTNKIDGIY CCCCCCCCCCHHEEECCCCCCCCEEECCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCHH EMSLAVACPEAARILLLKKNGIEFSESDENLGKHIISSEVNTKLSEEAYLPVEFLKEIRE HHHHHHCCCHHHEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH TSIKIMKNRKFSLDKRLYILGEFINALEDEYEYNCHNTLSFIREYDIDTVKDSYEENSMN HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHCCCCCE YIIQVDFFKKLLTMLRVEKDIDSDRFKEYSKEVKIGLNLDEENYLAKNAQMYIKAFEEYE EEEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHH KEFIEENTYIFENYIVNFIYSNLFPFCERESIFDSYIMLLIRYTFMRFYLVGMYIYHKKN HHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC KEDFNKSLSKEEVVRFIQCFSKVVEHHKTYLIDLLNYIKEHDFNNLEFVKTLLP HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCC >Mature Secondary Structure MKNIKMRYPIYLKEFKCIGGECEDSCCIGWDVDIDKFTFYQYENVSNSDMKNILESNLIK CCCCCEECCCCEEHHHHCCCCCCCCEEEECCCCCCCEEEEEECCCCCHHHHHHHHHHHHC NKKCQCDEIDFAKVKLGESKRCPFLKCDNYCVIHSNLGEEYLSNVCTSFPRVTNKIDGIY CCCCCCCCCCHHEEECCCCCCCCEEECCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCHH EMSLAVACPEAARILLLKKNGIEFSESDENLGKHIISSEVNTKLSEEAYLPVEFLKEIRE HHHHHHCCCHHHEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH TSIKIMKNRKFSLDKRLYILGEFINALEDEYEYNCHNTLSFIREYDIDTVKDSYEENSMN HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHCCCCCE YIIQVDFFKKLLTMLRVEKDIDSDRFKEYSKEVKIGLNLDEENYLAKNAQMYIKAFEEYE EEEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHH KEFIEENTYIFENYIVNFIYSNLFPFCERESIFDSYIMLLIRYTFMRFYLVGMYIYHKKN HHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC KEDFNKSLSKEEVVRFIQCFSKVVEHHKTYLIDLLNYIKEHDFNNLEFVKTLLP HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11142406 [H]