| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
Click here to switch to the map view.
The map label for this gene is 18309778
Identifier: 18309778
GI number: 18309778
Start: 979635
End: 980150
Strand: Direct
Name: 18309778
Synonym: CPE0796
Alternate gene names: NA
Gene position: 979635-980150 (Clockwise)
Preceding gene: 18309777
Following gene: 18309780
Centisome position: 32.32
GC content: 29.84
Gene sequence:
>516_bases ATGTATTTTAATAAAGTTCTAGGGATGAAAGAGTTTGGAAAAGATGAAAAGGTATTTTATAGAGTTGCCATAAGGGCAAT TATTTTACAGGGTGATAAAATACTTATGGTAAAATCTAATACAGGAGATTTTAAGTTCCCAGGTGGCGGAGTTGAAAAAG GGGAGACTCCAGAGGAAACCTTAAGAAGAGAAGTTCAAGAAGAAACAGGATACATATTAAATGAAGTTAAAGAAAAATTT GGAGTTTTAATTGAAAGAGATAGAAGAAGGAGAATGGGTTGTACAATTTTTGAAATGACCTCTCATTATTATCTTTGCAG TGTTATTGAAGAAAGAGGAGAACAACATTTAGATAAGTATGAGGAAGAGCTAGGTTTTACTCCTATATGGATTTCTTTAG ATGAGGTAATTAGAGAGAATGAAAATATACTTAATCAAAGAGAAAAAATTAATCCATGGGTTAAAAGAGAAACTTTTGTA CTTAAAAAGATTAAAGAATATTTAAATGAAAATTAG
Upstream 100 bases:
>100_bases ATAATATTAAAATGCAGATGATTATTAGGGGAGTTTAGGGAATAAACTCCCTTCTTTTTTGTATTTATGGATATATTAAT TTCATTAAAGGGGTGAAGAT
Downstream 100 bases:
>100_bases TTCTAAATATAAAAATACTTTATCAAAAAGATATTAAAATTTTTGATAAAGTATTTTTCTTTGTATAGATTTTTAATTTA AATATTATATAGTATAGAAA
Product: MutT/nudix family protein
Products: NA
Alternate protein names: MutT/Nudix Family Protein; MutT/NUDIX Family Protein; Nudix Hydrolase Protein; MutT/NUDIX Protein; Nudix Hydrolase; Phosphohydrolase; NTP Pyrophosphohydrolase; NUDIX Hydrolase Superfamily Protein
Number of amino acids: Translated: 171; Mature: 171
Protein sequence:
>171_residues MYFNKVLGMKEFGKDEKVFYRVAIRAIILQGDKILMVKSNTGDFKFPGGGVEKGETPEETLRREVQEETGYILNEVKEKF GVLIERDRRRRMGCTIFEMTSHYYLCSVIEERGEQHLDKYEEELGFTPIWISLDEVIRENENILNQREKINPWVKRETFV LKKIKEYLNEN
Sequences:
>Translated_171_residues MYFNKVLGMKEFGKDEKVFYRVAIRAIILQGDKILMVKSNTGDFKFPGGGVEKGETPEETLRREVQEETGYILNEVKEKF GVLIERDRRRRMGCTIFEMTSHYYLCSVIEERGEQHLDKYEEELGFTPIWISLDEVIRENENILNQREKINPWVKRETFV LKKIKEYLNEN >Mature_171_residues MYFNKVLGMKEFGKDEKVFYRVAIRAIILQGDKILMVKSNTGDFKFPGGGVEKGETPEETLRREVQEETGYILNEVKEKF GVLIERDRRRRMGCTIFEMTSHYYLCSVIEERGEQHLDKYEEELGFTPIWISLDEVIRENENILNQREKINPWVKRETFV LKKIKEYLNEN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20337; Mature: 20337
Theoretical pI: Translated: 5.49; Mature: 5.49
Prosite motif: PS00893 NUDIX
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYFNKVLGMKEFGKDEKVFYRVAIRAIILQGDKILMVKSNTGDFKFPGGGVEKGETPEET CCCHHHCCHHHHCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCEECCCCCCCCCCCHHHH LRREVQEETGYILNEVKEKFGVLIERDRRRRMGCTIFEMTSHYYLCSVIEERGEQHLDKY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH EEELGFTPIWISLDEVIRENENILNQREKINPWVKRETFVLKKIKEYLNEN HHHHCCCEEEEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MYFNKVLGMKEFGKDEKVFYRVAIRAIILQGDKILMVKSNTGDFKFPGGGVEKGETPEET CCCHHHCCHHHHCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCEECCCCCCCCCCCHHHH LRREVQEETGYILNEVKEKFGVLIERDRRRRMGCTIFEMTSHYYLCSVIEERGEQHLDKY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH EEELGFTPIWISLDEVIRENENILNQREKINPWVKRETFVLKKIKEYLNEN HHHHCCCEEEEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA