| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is yhhW [C]
Identifier: 18309772
GI number: 18309772
Start: 973712
End: 974593
Strand: Direct
Name: yhhW [C]
Synonym: CPE0790
Alternate gene names: 18309772
Gene position: 973712-974593 (Clockwise)
Preceding gene: 18309771
Following gene: 18309773
Centisome position: 32.12
GC content: 30.95
Gene sequence:
>882_bases ATGAAAAAATTCAGAACTATAGAGAATATATTTAAAGGACCAGAACCACATATGGTTGGGGATGGATTTAGAGTATCTCA GTATATACCAACAGGAATAAAAAGTATGGAGCGTTTATCACCATTTTTATTATTAGATTATAATGAACCATATTATTTTA AGCCATCAGAGACTAGATTAGGCGTTGGAGCTCATCCTCATCGTGGATTTGAAACAGTAACAATTGCTTATGATGGAAAG GTTGAGCATCATGATAATAAAGGAAATCATGGGATTATAGGACCAGGGGATGTTCAGTGGATGACTGCAGCATCAGGTAT TATGCATAAAGAATATCATGAAGCTGAATTTAGTAAGAATGGTGGTATCTTTCATATGGTTCAACTTTGGGTGAATCTAC CTAAAGATAAAAAAATGATAGAACCTAAATATCAACCTTTATTAAAAGAAGAAATGGGAGTTTTAAAACTTGATAATGAT AAAGGAGAAATAAGTATAATTGCAGGGGAAGTTAATGGGGTAAAGGGGCCAGCTAATACCTTTACTCATATAAATCTTTA TAATATAAATTTAAAGAATTATGGTAATACTACATTAAGTGAACCAAAAAATTTTAATACTGCAATTCTTATATTAAAAG GTGAAGCTAAAGTAAATGAAGATAAAATATGTAAAGAAGGAGATTTTATCATATTTGATAATGTTGAGGGAGAGATTTTA CTAGAGTCTTTGACTGAAGAGTCACTATTTTTAGTTCTTAGTGGAGAACCAATAAATGAGCCGGTTGTTTCACATGGACC ATTTGTTATGAATACACTAGGAGAAATACTTGATGCATATGAAGATTTTAGAAACAATAAGTTTGGAACAGAGAATTTTT AA
Upstream 100 bases:
>100_bases AAATTTAAAAATGTATAGTCATCAATAAAAAATAAAAATTTTTAGGTATTTATCACTAATTAGTGATAAAAGTTGTTTTA GATAAAAAGGGGGCAAAGCA
Downstream 100 bases:
>100_bases TAATTTATATATAAATTAGAAGGAGTGAATACAATGAGTAAAGTATTATATGTTAAAGCAAATATAAAAAATGAGGGAGA ATCAAGAACTTTTAAAGTAT
Product: pirin-like protein
Products: NA
Alternate protein names: Putative quercetinase; Pirin-like protein PA2418 [H]
Number of amino acids: Translated: 293; Mature: 293
Protein sequence:
>293_residues MKKFRTIENIFKGPEPHMVGDGFRVSQYIPTGIKSMERLSPFLLLDYNEPYYFKPSETRLGVGAHPHRGFETVTIAYDGK VEHHDNKGNHGIIGPGDVQWMTAASGIMHKEYHEAEFSKNGGIFHMVQLWVNLPKDKKMIEPKYQPLLKEEMGVLKLDND KGEISIIAGEVNGVKGPANTFTHINLYNINLKNYGNTTLSEPKNFNTAILILKGEAKVNEDKICKEGDFIIFDNVEGEIL LESLTEESLFLVLSGEPINEPVVSHGPFVMNTLGEILDAYEDFRNNKFGTENF
Sequences:
>Translated_293_residues MKKFRTIENIFKGPEPHMVGDGFRVSQYIPTGIKSMERLSPFLLLDYNEPYYFKPSETRLGVGAHPHRGFETVTIAYDGK VEHHDNKGNHGIIGPGDVQWMTAASGIMHKEYHEAEFSKNGGIFHMVQLWVNLPKDKKMIEPKYQPLLKEEMGVLKLDND KGEISIIAGEVNGVKGPANTFTHINLYNINLKNYGNTTLSEPKNFNTAILILKGEAKVNEDKICKEGDFIIFDNVEGEIL LESLTEESLFLVLSGEPINEPVVSHGPFVMNTLGEILDAYEDFRNNKFGTENF >Mature_293_residues MKKFRTIENIFKGPEPHMVGDGFRVSQYIPTGIKSMERLSPFLLLDYNEPYYFKPSETRLGVGAHPHRGFETVTIAYDGK VEHHDNKGNHGIIGPGDVQWMTAASGIMHKEYHEAEFSKNGGIFHMVQLWVNLPKDKKMIEPKYQPLLKEEMGVLKLDND KGEISIIAGEVNGVKGPANTFTHINLYNINLKNYGNTTLSEPKNFNTAILILKGEAKVNEDKICKEGDFIIFDNVEGEIL LESLTEESLFLVLSGEPINEPVVSHGPFVMNTLGEILDAYEDFRNNKFGTENF
Specific function: Putative quercetin 2,3-dioxygenase [H]
COG id: COG1741
COG function: function code R; Pirin-related protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pirin family [H]
Homologues:
Organism=Homo sapiens, GI66363697, Length=285, Percent_Identity=36.140350877193, Blast_Score=147, Evalue=8e-36, Organism=Homo sapiens, GI4505823, Length=285, Percent_Identity=36.140350877193, Blast_Score=147, Evalue=8e-36, Organism=Escherichia coli, GI1789847, Length=225, Percent_Identity=23.5555555555556, Blast_Score=65, Evalue=7e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011051 - InterPro: IPR012093 - InterPro: IPR008778 - InterPro: IPR003829 - InterPro: IPR014710 [H]
Pfam domain/function: PF02678 Pirin; PF05726 Pirin_C [H]
EC number: =1.13.11.24 [H]
Molecular weight: Translated: 33034; Mature: 33034
Theoretical pI: Translated: 5.40; Mature: 5.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKFRTIENIFKGPEPHMVGDGFRVSQYIPTGIKSMERLSPFLLLDYNEPYYFKPSETRL CCHHHHHHHHHCCCCCCEECCCEEEEHHCCHHHHHHHHCCCEEEEECCCCEEECCCCCEE GVGAHPHRGFETVTIAYDGKVEHHDNKGNHGIIGPGDVQWMTAASGIMHKEYHEAEFSKN CCCCCCCCCCEEEEEEECCEEEECCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHCCC GGIFHMVQLWVNLPKDKKMIEPKYQPLLKEEMGVLKLDNDKGEISIIAGEVNGVKGPANT CCEEEEEHHHHCCCCCCCCCCCCHHHHHHHCCCEEEEECCCCEEEEEEECCCCCCCCCCC FTHINLYNINLKNYGNTTLSEPKNFNTAILILKGEAKVNEDKICKEGDFIIFDNVEGEIL EEEEEEEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEECCCCEEH LESLTEESLFLVLSGEPINEPVVSHGPFVMNTLGEILDAYEDFRNNKFGTENF EECCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MKKFRTIENIFKGPEPHMVGDGFRVSQYIPTGIKSMERLSPFLLLDYNEPYYFKPSETRL CCHHHHHHHHHCCCCCCEECCCEEEEHHCCHHHHHHHHCCCEEEEECCCCEEECCCCCEE GVGAHPHRGFETVTIAYDGKVEHHDNKGNHGIIGPGDVQWMTAASGIMHKEYHEAEFSKN CCCCCCCCCCEEEEEEECCEEEECCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHCCC GGIFHMVQLWVNLPKDKKMIEPKYQPLLKEEMGVLKLDNDKGEISIIAGEVNGVKGPANT CCEEEEEHHHHCCCCCCCCCCCCHHHHHHHCCCEEEEECCCCEEEEEEECCCCCCCCCCC FTHINLYNINLKNYGNTTLSEPKNFNTAILILKGEAKVNEDKICKEGDFIIFDNVEGEIL EEEEEEEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEECCCCEEH LESLTEESLFLVLSGEPINEPVVSHGPFVMNTLGEILDAYEDFRNNKFGTENF EECCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]