Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18309770

Identifier: 18309770

GI number: 18309770

Start: 972580

End: 973083

Strand: Direct

Name: 18309770

Synonym: CPE0788

Alternate gene names: NA

Gene position: 972580-973083 (Clockwise)

Preceding gene: 18309769

Following gene: 18309771

Centisome position: 32.08

GC content: 24.8

Gene sequence:

>504_bases
ATGAAAGAATTAAGAATAAAGAAATTTACTGTAGAAGAATTTAAAAATAAGTTTAACTTAGATAATATAGAAAATATTTC
AGCTTATGAAGTAAGTGAATTAGGAAATCTTTTTGAGAATTCATCTGAAGAGGTTTATTTCTTAATTGAAGATAAATTAT
ATGCTGAGCCAAAGGAAGCTATAGGGGAAGGAGAACTTTCTAGAGAGGATATTGAAACTATAGAAAAATTAAATGAAGAA
TTTAGAGATTCTTTAATAAGCTTAAGAGAGTTTTTATATCATGGAAATGGAAAATTAGATTCAGAAGAGGCTAGAGATAT
TCAAGTTTCAATGAATAATAATATAAAATCAGCTAAAGAAATTTTAAATAGACATAATATAGTTGATAAAGACCAATTAA
AGAAAATGAGTAAAAAATACTTTATGCCAGACTTCTTAAATGGTGTATTTGGTAATGAAGAATATAATTTTGAAAATGAA
GTAGAAATAGACTGCGGATTATAA

Upstream 100 bases:

>100_bases
TATTTTAGATTAATAATGATATAATAAACTTATTATTTTTAATAAGAGATTAGAATATTTATTTAATGATTTAAAATATT
CAAAAAGGAGATATACATAT

Downstream 100 bases:

>100_bases
GAGAAAGCTATATCAAATCTTTACTTGGTTTGATATAGCTTTTTTATTTAAATAATTATATTTAATGTTGACAATATCAT
TAATTAGTGATAAATTAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 167; Mature: 167

Protein sequence:

>167_residues
MKELRIKKFTVEEFKNKFNLDNIENISAYEVSELGNLFENSSEEVYFLIEDKLYAEPKEAIGEGELSREDIETIEKLNEE
FRDSLISLREFLYHGNGKLDSEEARDIQVSMNNNIKSAKEILNRHNIVDKDQLKKMSKKYFMPDFLNGVFGNEEYNFENE
VEIDCGL

Sequences:

>Translated_167_residues
MKELRIKKFTVEEFKNKFNLDNIENISAYEVSELGNLFENSSEEVYFLIEDKLYAEPKEAIGEGELSREDIETIEKLNEE
FRDSLISLREFLYHGNGKLDSEEARDIQVSMNNNIKSAKEILNRHNIVDKDQLKKMSKKYFMPDFLNGVFGNEEYNFENE
VEIDCGL
>Mature_167_residues
MKELRIKKFTVEEFKNKFNLDNIENISAYEVSELGNLFENSSEEVYFLIEDKLYAEPKEAIGEGELSREDIETIEKLNEE
FRDSLISLREFLYHGNGKLDSEEARDIQVSMNNNIKSAKEILNRHNIVDKDQLKKMSKKYFMPDFLNGVFGNEEYNFENE
VEIDCGL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19610; Mature: 19610

Theoretical pI: Translated: 4.29; Mature: 4.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKELRIKKFTVEEFKNKFNLDNIENISAYEVSELGNLFENSSEEVYFLIEDKLYAEPKEA
CCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCHHCCHHHH
IGEGELSREDIETIEKLNEEFRDSLISLREFLYHGNGKLDSEEARDIQVSMNNNIKSAKE
HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHH
ILNRHNIVDKDQLKKMSKKYFMPDFLNGVFGNEEYNFENEVEIDCGL
HHHHCCCCCHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCEEEECCC
>Mature Secondary Structure
MKELRIKKFTVEEFKNKFNLDNIENISAYEVSELGNLFENSSEEVYFLIEDKLYAEPKEA
CCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCHHCCHHHH
IGEGELSREDIETIEKLNEEFRDSLISLREFLYHGNGKLDSEEARDIQVSMNNNIKSAKE
HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHH
ILNRHNIVDKDQLKKMSKKYFMPDFLNGVFGNEEYNFENEVEIDCGL
HHHHCCCCCHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA