| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is gutA [H]
Identifier: 18309751
GI number: 18309751
Start: 949815
End: 951179
Strand: Direct
Name: gutA [H]
Synonym: CPE0769
Alternate gene names: 18309751
Gene position: 949815-951179 (Clockwise)
Preceding gene: 18309750
Following gene: 18309753
Centisome position: 31.33
GC content: 29.01
Gene sequence:
>1365_bases TTGGATACATTAATAAATAAAAAAGTAGAAAAAAGTGATGATGTTTCTATAAAAACTTTAATTACTTATAGTATGGGAAG TTTAGGAAACAATATGATATACGCATTGATTAGTTCCTACCTTTTAATATTTTTAACAGATAGTTTTAAAGTAGGGGCAG CTGCCATAGGAACCTTATTTTTGGTGGCAAGAATTATAGATGCAATAACAGACCCTATAATGGGGGTTATAGTTGATAAT ACTAATACTAAAATCGGAAAGAGTAGACCCTATTTATTTATCGTTCCTATTTTCATGGGAATAGCAACAATTATGTGTTT TTCAGCACCAGATTTAAGTTATAGTGGTAAAATAATATGGATATACATAGCATATATTTTCTGGGGAATATCCTTTACTG CAATGGATATACCATATTGGTCATTATCTGCCAATATTACAAGATCTTCATCAGGAAAAACTAAGATTGTTACATCAGCA AGAACAGTAGCCTATGTAGGTAATTTTATAATTTTAACTTCAACAATTCCTCTTGTATCAATAATTGGAAACTGGCAAAC TGTGGCCATAATATATGTTTGCTTTGCTACTATATTTACTTGGGTTACAGCCTTTGGAATTAGAGAAATTAAGGATAATG TGGCAAAGAAAAAGGAAAAGCAAGGGTTTAAACAATTTATAAATCTATTAAAGACAAATAAGCCTTTAAGAATAGTTTTA TTATCAATGTTAGTTTTAGAATTAAGTGGATCAATAAAAAATACAATATCTATATATTATGTAAAGTATAATTTTAATGC GGAAATGATGATTCCAGTAGTTAGTTCAGTTGGTATGGGAGCTAGTATATTAGGTGGAATAATGTCACCATTTTTAACAA AAAAATTAGGAAAAAGAAATACAGCTCTTTTAGGATTATTAGCTGGTGCTGCAGGATCATTTTTAGTATTTTTATTATCC TATTCTTCATTACCTTTAATGATAGTTATAAACTTCATAAGTGGAATTTTTGATGGAGCAGGTTATATTACTTTAACATC AATGGTTGCAGATTGTGTTGAGTATGGTGAGTGGAAAACTGGAAAAAGATCAGAAGGAATGATATTCTCTTTAAATATAT TTAAAAGTAAGATTGCTAGTGCTATTGGAGGATCCTTATGTGGATATATCTTAGCGTATATTGGTTATACAGCAAATGAA AGTCAATCTGCTTTTACATTAAACGGAATTCATTTAATACAGACTTTAGTTCCATGTGCAATTGTAATAATAAGCTTTAT TTTATTAAGAAGATATAATTTATCTGAGGCAGAATATGAAGCTATAGTTGATGACTTGAAAAATGGTGTTACAAGAATAG GTTAA
Upstream 100 bases:
>100_bases GCAATAATATAAACGAAGATTAAGAAATCGATTTCTTTTTTGAAGGTTTAATTAAACGGGTATTTATAAGATTTTATTAT TTAAATATAGAGGTGATGGT
Downstream 100 bases:
>100_bases CATTAATATGAAAAGTATTAGGGCTAATTTAGATATTAATTCTAAATTAAGTGAAATTAATATAGTAATTATATTAAAAG TCTAATTAAGACTTTAGAAA
Product: sugar transport protein
Products: Proton [Cytoplasm]; Glucuronides [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 454; Mature: 454
Protein sequence:
>454_residues MDTLINKKVEKSDDVSIKTLITYSMGSLGNNMIYALISSYLLIFLTDSFKVGAAAIGTLFLVARIIDAITDPIMGVIVDN TNTKIGKSRPYLFIVPIFMGIATIMCFSAPDLSYSGKIIWIYIAYIFWGISFTAMDIPYWSLSANITRSSSGKTKIVTSA RTVAYVGNFIILTSTIPLVSIIGNWQTVAIIYVCFATIFTWVTAFGIREIKDNVAKKKEKQGFKQFINLLKTNKPLRIVL LSMLVLELSGSIKNTISIYYVKYNFNAEMMIPVVSSVGMGASILGGIMSPFLTKKLGKRNTALLGLLAGAAGSFLVFLLS YSSLPLMIVINFISGIFDGAGYITLTSMVADCVEYGEWKTGKRSEGMIFSLNIFKSKIASAIGGSLCGYILAYIGYTANE SQSAFTLNGIHLIQTLVPCAIVIISFILLRRYNLSEAEYEAIVDDLKNGVTRIG
Sequences:
>Translated_454_residues MDTLINKKVEKSDDVSIKTLITYSMGSLGNNMIYALISSYLLIFLTDSFKVGAAAIGTLFLVARIIDAITDPIMGVIVDN TNTKIGKSRPYLFIVPIFMGIATIMCFSAPDLSYSGKIIWIYIAYIFWGISFTAMDIPYWSLSANITRSSSGKTKIVTSA RTVAYVGNFIILTSTIPLVSIIGNWQTVAIIYVCFATIFTWVTAFGIREIKDNVAKKKEKQGFKQFINLLKTNKPLRIVL LSMLVLELSGSIKNTISIYYVKYNFNAEMMIPVVSSVGMGASILGGIMSPFLTKKLGKRNTALLGLLAGAAGSFLVFLLS YSSLPLMIVINFISGIFDGAGYITLTSMVADCVEYGEWKTGKRSEGMIFSLNIFKSKIASAIGGSLCGYILAYIGYTANE SQSAFTLNGIHLIQTLVPCAIVIISFILLRRYNLSEAEYEAIVDDLKNGVTRIG >Mature_454_residues MDTLINKKVEKSDDVSIKTLITYSMGSLGNNMIYALISSYLLIFLTDSFKVGAAAIGTLFLVARIIDAITDPIMGVIVDN TNTKIGKSRPYLFIVPIFMGIATIMCFSAPDLSYSGKIIWIYIAYIFWGISFTAMDIPYWSLSANITRSSSGKTKIVTSA RTVAYVGNFIILTSTIPLVSIIGNWQTVAIIYVCFATIFTWVTAFGIREIKDNVAKKKEKQGFKQFINLLKTNKPLRIVL LSMLVLELSGSIKNTISIYYVKYNFNAEMMIPVVSSVGMGASILGGIMSPFLTKKLGKRNTALLGLLAGAAGSFLVFLLS YSSLPLMIVINFISGIFDGAGYITLTSMVADCVEYGEWKTGKRSEGMIFSLNIFKSKIASAIGGSLCGYILAYIGYTANE SQSAFTLNGIHLIQTLVPCAIVIISFILLRRYNLSEAEYEAIVDDLKNGVTRIG
Specific function: Probably involved in glucitol uptake [H]
COG id: COG2211
COG function: function code G; Na+/melibiose symporter and related transporters
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sodium:galactoside symporter (TC 2.A.2) family [H]
Homologues:
Organism=Escherichia coli, GI1787902, Length=460, Percent_Identity=30.4347826086957, Blast_Score=205, Evalue=5e-54, Organism=Escherichia coli, GI1786466, Length=449, Percent_Identity=28.9532293986637, Blast_Score=180, Evalue=1e-46, Organism=Escherichia coli, GI1790561, Length=429, Percent_Identity=27.972027972028, Blast_Score=177, Evalue=1e-45, Organism=Escherichia coli, GI87082306, Length=456, Percent_Identity=28.5087719298246, Blast_Score=170, Evalue=2e-43, Organism=Escherichia coli, GI145693206, Length=445, Percent_Identity=25.1685393258427, Blast_Score=168, Evalue=8e-43, Organism=Escherichia coli, GI48994989, Length=445, Percent_Identity=26.2921348314607, Blast_Score=160, Evalue=1e-40,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR001927 - InterPro: IPR018043 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 49662; Mature: 49662
Theoretical pI: Translated: 9.65; Mature: 9.65
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDTLINKKVEKSDDVSIKTLITYSMGSLGNNMIYALISSYLLIFLTDSFKVGAAAIGTLF CCCHHCCCCCCCCCCEEEEEEEHHHHCCCCHHHHHHHHHHHHHHEECCCCHHHHHHHHHH LVARIIDAITDPIMGVIVDNTNTKIGKSRPYLFIVPIFMGIATIMCFSAPDLSYSGKIIW HHHHHHHHHHCCCEEEEECCCCCCCCCCCCEEEEHHHHHHHHHHHHHCCCCCCCCCCCHH IYIAYIFWGISFTAMDIPYWSLSANITRSSSGKTKIVTSARTVAYVGNFIILTSTIPLVS HHHHHHHHCCHHEEEECCEEEEECCCEECCCCCEEEEEHHHHHHHHCCEEEEECHHHHHH IIGNWQTVAIIYVCFATIFTWVTAFGIREIKDNVAKKKEKQGFKQFINLLKTNKPLRIVL HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH LSMLVLELSGSIKNTISIYYVKYNFNAEMMIPVVSSVGMGASILGGIMSPFLTKKLGKRN HHHHHHHHCCCCCCEEEEEEEEEECCCEEEHHHHHCCCCCHHHHHHHHHHHHHHHHCCCC TALLGLLAGAAGSFLVFLLSYSSLPLMIVINFISGIFDGAGYITLTSMVADCVEYGEWKT HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCC GKRSEGMIFSLNIFKSKIASAIGGSLCGYILAYIGYTANESQSAFTLNGIHLIQTLVPCA CCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHHHH IVIISFILLRRYNLSEAEYEAIVDDLKNGVTRIG HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MDTLINKKVEKSDDVSIKTLITYSMGSLGNNMIYALISSYLLIFLTDSFKVGAAAIGTLF CCCHHCCCCCCCCCCEEEEEEEHHHHCCCCHHHHHHHHHHHHHHEECCCCHHHHHHHHHH LVARIIDAITDPIMGVIVDNTNTKIGKSRPYLFIVPIFMGIATIMCFSAPDLSYSGKIIW HHHHHHHHHHCCCEEEEECCCCCCCCCCCCEEEEHHHHHHHHHHHHHCCCCCCCCCCCHH IYIAYIFWGISFTAMDIPYWSLSANITRSSSGKTKIVTSARTVAYVGNFIILTSTIPLVS HHHHHHHHCCHHEEEECCEEEEECCCEECCCCCEEEEEHHHHHHHHCCEEEEECHHHHHH IIGNWQTVAIIYVCFATIFTWVTAFGIREIKDNVAKKKEKQGFKQFINLLKTNKPLRIVL HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH LSMLVLELSGSIKNTISIYYVKYNFNAEMMIPVVSSVGMGASILGGIMSPFLTKKLGKRN HHHHHHHHCCCCCCEEEEEEEEEECCCEEEHHHHHCCCCCHHHHHHHHHHHHHHHHCCCC TALLGLLAGAAGSFLVFLLSYSSLPLMIVINFISGIFDGAGYITLTSMVADCVEYGEWKT HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCC GKRSEGMIFSLNIFKSKIASAIGGSLCGYILAYIGYTANESQSAFTLNGIHLIQTLVPCA CCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHHHH IVIISFILLRRYNLSEAEYEAIVDDLKNGVTRIG HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; Glucuronides [Periplasm] [C]
Specific reaction: Proton [Periplasm] + Glucuronides [Periplasm] = Proton [Cytoplasm] + Glucuronides [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9455482; 9384377 [H]