| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is 18309731
Identifier: 18309731
GI number: 18309731
Start: 928856
End: 929869
Strand: Direct
Name: 18309731
Synonym: CPE0749
Alternate gene names: NA
Gene position: 928856-929869 (Clockwise)
Preceding gene: 18309730
Following gene: 18309732
Centisome position: 30.64
GC content: 22.98
Gene sequence:
>1014_bases ATGAGGAATTTAATTTTAGAAGTAAATAAAAATATTGAACTAATGAATATAATTTTACTTACAAGTAGATATAGTGAGAT TTTAAGTGAGAGATTTGGATTTAAGGTAGATTTTGTAGATTATTCTAATGAAAAGTATATTAGAGATATAAATGACTACT TTCAAAAATACTCTGATCATGAAATATATATAAAGTTAGAAGAAATGATTAAAGATGGGTTTTTCTTAGGTAGACCTATG GTTTTTGCTTTAGCTTTAGATAATGAAGAGGGGGCAGACTTTAAGTATGAAATTAGTGAGTTTAATATAAAATTAAGTGG AGGAATTAAGAAGCTAGAAGAATTTAGAGTTTTATTTAATTCGTTTAAGGAAGAAACAAAGTTTGATGATTTTTTCTCTA AAGTTGAAGTATATTATAAAGATGATTTAGAATACTTCAATAGAATTTTAGAAAAATATAATTTCATTAATAACTTAGAA GAATTTTCAGGCAATAAAAATACTAACTATAATTTTGTTATGAGTAATTTATCTAAATATAATTTTGGTTTTGATTTAAA TAAGGATAAAGAAAAGTATATAAATATTGTATTTAATTTAAGTATTTTTTTAGGTGATGCTATTTTTATTGATAATGATT ATGACATATGCAATTTAATTTTTCATGAGTTAAGTCATCCTGTGATAAATCCATTAACTGAGAGTAATTTAGCTTTAGTT AATGAATATAAAGAAATACATGAAGAACTTGAAAAATATAAATCTGAATTCTCTGGTTATGGTGATTGGGAAGAATGTGT TAATGAGCATATAGTAAGAGCCTTATCAATACATTTAAGTAAAAAATACTTTGATATTGATTTTACTAATAGAAGAATTG AATTTGATTATAACTTAGGTTATAGATATATTAAGGAGATAGTCAGTAAGTTAGAGGAATACGAGAAAAATAGAAACAGA TATAAATCCATAGAGGAATTTTATCCAGAACTTATAAAAGTATTTGTAATATAA
Upstream 100 bases:
>100_bases AATTATTGTTAATCAAAAAGGAAGAATGAATCTTATAAAGAATATTATGTAGAAATGGAGATTAATATAAAATAAATTTT AATGACAAATAGGAGAAGAT
Downstream 100 bases:
>100_bases TAAATACTAAAGGTAATAAGTTTGAGTAGATTATAACTTTTTAGTTAAATTATTTATTTGGGACTGTGATATTATTGGGA TGAAATATGAAGAATTTAGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 337; Mature: 337
Protein sequence:
>337_residues MRNLILEVNKNIELMNIILLTSRYSEILSERFGFKVDFVDYSNEKYIRDINDYFQKYSDHEIYIKLEEMIKDGFFLGRPM VFALALDNEEGADFKYEISEFNIKLSGGIKKLEEFRVLFNSFKEETKFDDFFSKVEVYYKDDLEYFNRILEKYNFINNLE EFSGNKNTNYNFVMSNLSKYNFGFDLNKDKEKYINIVFNLSIFLGDAIFIDNDYDICNLIFHELSHPVINPLTESNLALV NEYKEIHEELEKYKSEFSGYGDWEECVNEHIVRALSIHLSKKYFDIDFTNRRIEFDYNLGYRYIKEIVSKLEEYEKNRNR YKSIEEFYPELIKVFVI
Sequences:
>Translated_337_residues MRNLILEVNKNIELMNIILLTSRYSEILSERFGFKVDFVDYSNEKYIRDINDYFQKYSDHEIYIKLEEMIKDGFFLGRPM VFALALDNEEGADFKYEISEFNIKLSGGIKKLEEFRVLFNSFKEETKFDDFFSKVEVYYKDDLEYFNRILEKYNFINNLE EFSGNKNTNYNFVMSNLSKYNFGFDLNKDKEKYINIVFNLSIFLGDAIFIDNDYDICNLIFHELSHPVINPLTESNLALV NEYKEIHEELEKYKSEFSGYGDWEECVNEHIVRALSIHLSKKYFDIDFTNRRIEFDYNLGYRYIKEIVSKLEEYEKNRNR YKSIEEFYPELIKVFVI >Mature_337_residues MRNLILEVNKNIELMNIILLTSRYSEILSERFGFKVDFVDYSNEKYIRDINDYFQKYSDHEIYIKLEEMIKDGFFLGRPM VFALALDNEEGADFKYEISEFNIKLSGGIKKLEEFRVLFNSFKEETKFDDFFSKVEVYYKDDLEYFNRILEKYNFINNLE EFSGNKNTNYNFVMSNLSKYNFGFDLNKDKEKYINIVFNLSIFLGDAIFIDNDYDICNLIFHELSHPVINPLTESNLALV NEYKEIHEELEKYKSEFSGYGDWEECVNEHIVRALSIHLSKKYFDIDFTNRRIEFDYNLGYRYIKEIVSKLEEYEKNRNR YKSIEEFYPELIKVFVI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40674; Mature: 40674
Theoretical pI: Translated: 4.58; Mature: 4.58
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRNLILEVNKNIELMNIILLTSRYSEILSERFGFKVDFVDYSNEKYIRDINDYFQKYSDH CCCEEEEECCCEEEEHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHCCCCC EIYIKLEEMIKDGFFLGRPMVFALALDNEEGADFKYEISEFNIKLSGGIKKLEEFRVLFN EEEEEHHHHHHCCCCCCCCEEEEEEECCCCCCCEEEEEEEEEEEECCCHHHHHHHHHHHH SFKEETKFDDFFSKVEVYYKDDLEYFNRILEKYNFINNLEEFSGNKNTNYNFVMSNLSKY HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHEECCCHHC NFGFDLNKDKEKYINIVFNLSIFLGDAIFIDNDYDICNLIFHELSHPVINPLTESNLALV CCCCCCCCCHHHHEEEEEEEEEHCCCEEEEECCCHHHHHHHHHHCCHHCCCCCCCCHHHH NEYKEIHEELEKYKSEFSGYGDWEECVNEHIVRALSIHLSKKYFDIDFTNRRIEFDYNLG HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHEEEEEEECCCEEEEEECCC YRYIKEIVSKLEEYEKNRNRYKSIEEFYPELIKVFVI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRNLILEVNKNIELMNIILLTSRYSEILSERFGFKVDFVDYSNEKYIRDINDYFQKYSDH CCCEEEEECCCEEEEHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHCCCCC EIYIKLEEMIKDGFFLGRPMVFALALDNEEGADFKYEISEFNIKLSGGIKKLEEFRVLFN EEEEEHHHHHHCCCCCCCCEEEEEEECCCCCCCEEEEEEEEEEEECCCHHHHHHHHHHHH SFKEETKFDDFFSKVEVYYKDDLEYFNRILEKYNFINNLEEFSGNKNTNYNFVMSNLSKY HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHEECCCHHC NFGFDLNKDKEKYINIVFNLSIFLGDAIFIDNDYDICNLIFHELSHPVINPLTESNLALV CCCCCCCCCHHHHEEEEEEEEEHCCCEEEEECCCHHHHHHHHHHCCHHCCCCCCCCHHHH NEYKEIHEELEKYKSEFSGYGDWEECVNEHIVRALSIHLSKKYFDIDFTNRRIEFDYNLG HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHEEEEEEECCCEEEEEECCC YRYIKEIVSKLEEYEKNRNRYKSIEEFYPELIKVFVI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA