Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18309730

Identifier: 18309730

GI number: 18309730

Start: 928284

End: 928649

Strand: Direct

Name: 18309730

Synonym: CPE0748

Alternate gene names: NA

Gene position: 928284-928649 (Clockwise)

Preceding gene: 18309729

Following gene: 18309731

Centisome position: 30.62

GC content: 24.04

Gene sequence:

>366_bases
ATGCGCTTTGAACAGGATTATATTAAACGAGTTATAGATTCTATAGGGAAAATGTGTGTTGCTATTGTGGCTAGTAAGAA
TGTTATTGAAAGTAATATAGAAGATAACAATTATGATATGAAAATTTCAGAAGATGATTTATTAGAGATTATGGTTAAAA
AATATGTTGATGAAGGAAACATAAATGAAGCTGAAAATATAATTTTTGAAGCTATAAAAATTCACAAAACTAAAAAGAGT
TATGAAATTACTTTAGATTTTTATAAGCATATAAATGACTATAGTGATGAGAAGTTACAAGAACTTAATTTTTCAAGAGA
AGAAATAGTAGATGGGTTAAATGAAATTAAAAATACATTTAGATAA

Upstream 100 bases:

>100_bases
GTATATATGAATCTTTTAGTTAATTAGGAAGCTATAAAATTCAAAAAATGTAATTAAATGTTTAAGTGGTGATATAATAA
ATACTGGGGAGGGGATTATT

Downstream 100 bases:

>100_bases
GTTTTGATTAATGATAAATATAAGATCTTAATCCTTAATTGGGTTAAGATTTTTTTAGTATTATGTGACTTATAAATGAT
GTTAATAAATAAAAAAATAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 121; Mature: 121

Protein sequence:

>121_residues
MRFEQDYIKRVIDSIGKMCVAIVASKNVIESNIEDNNYDMKISEDDLLEIMVKKYVDEGNINEAENIIFEAIKIHKTKKS
YEITLDFYKHINDYSDEKLQELNFSREEIVDGLNEIKNTFR

Sequences:

>Translated_121_residues
MRFEQDYIKRVIDSIGKMCVAIVASKNVIESNIEDNNYDMKISEDDLLEIMVKKYVDEGNINEAENIIFEAIKIHKTKKS
YEITLDFYKHINDYSDEKLQELNFSREEIVDGLNEIKNTFR
>Mature_121_residues
MRFEQDYIKRVIDSIGKMCVAIVASKNVIESNIEDNNYDMKISEDDLLEIMVKKYVDEGNINEAENIIFEAIKIHKTKKS
YEITLDFYKHINDYSDEKLQELNFSREEIVDGLNEIKNTFR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14305; Mature: 14305

Theoretical pI: Translated: 4.46; Mature: 4.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFEQDYIKRVIDSIGKMCVAIVASKNVIESNIEDNNYDMKISEDDLLEIMVKKYVDEGN
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECHHHHHHHHHHHHHCCCC
INEAENIIFEAIKIHKTKKSYEITLDFYKHINDYSDEKLQELNFSREEIVDGLNEIKNTF
CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHC
R
C
>Mature Secondary Structure
MRFEQDYIKRVIDSIGKMCVAIVASKNVIESNIEDNNYDMKISEDDLLEIMVKKYVDEGN
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECHHHHHHHHHHHHHCCCC
INEAENIIFEAIKIHKTKKSYEITLDFYKHINDYSDEKLQELNFSREEIVDGLNEIKNTF
CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHC
R
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA