Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18309718

Identifier: 18309718

GI number: 18309718

Start: 913050

End: 914381

Strand: Direct

Name: 18309718

Synonym: CPE0736

Alternate gene names: NA

Gene position: 913050-914381 (Clockwise)

Preceding gene: 18309717

Following gene: 18309721

Centisome position: 30.12

GC content: 27.63

Gene sequence:

>1332_bases
ATGAAAGAAATTAAACTAAGTAGAATAGATATATTTTCTATAGTTTTGGGAGCCATAATTGGATGGGGATCATTTATGCT
ACCTGGAACTAAATTTTTAAAGGAGTCTGGGGTAATAAATACTTTCCTAGGGCTTTTTTTAGGGGTAATATGTATAATTA
TTATTGAAAAAAACTATTTAATAATGATGCAAACTCACGATGAAGAGGGAGGAGAGTTCTCTTTTACTTATAATAATTTA
GGAAAGAAACATGGATTTATTGTGGGATGGTTTTTAACTTTGGCTTATTTTACAATGATTCCATTAAATGCAACTGCATT
TCCACTTGTAATCAAGAAGATATTTGGTGGGATTTTAGAATTTGGTTATTTATATAATGTAGCTGGATATAATATTTATC
TAGGAGAAATATTAACATCAAGTATAATAATAATTGCTTTTGCAGCATTAAATTTAAATGGGATAAAGAAAACAAGTAAA
GTTCAGAACTTAATAATTTTTAGCTTAATATCAATGACTTTTATTGTTTTAGTTGGCATGATAATTAAAGGAAACAGAAT
AGATTTTATTAATACATATATTAATAAATATTCTTTTGATTTAAGTCAAATAATAAAAGTATTTGCTATAACACCTTTTG
CTTTTATAGGCTTTGATGCTATTCCACAATTAAGTAAAGAATTAAACTTTTCTAAGAAAAAGGCATCAAGGGTAGCAGTG
ATTTCCTTAGTTATGGGTGCATTAATTTATAATATATTAAATATTATAACTGCCTTAGCTTATTCACCAGAACAAGCAAG
TTCTTTAGAATGGGCAGCTGGAAGTGCTGTATTAAGCATTTTAGGCAAAGGAGCCTTCTTTTTACTTATAATAGCTTTAA
CTGCCGCTGTATGGAGTGGGATAAATGGATTTATGATTTGTAGTTCTAAATTATTAGGATCTATAGCAAATTATAAAATG
CTTCCTTCTAAGATGGGAAAGGTAAATAAAAATGGAGTCTTTAGTAATGCTATAATTTTCATAACTATAGTAAGTTTAAT
AGCCCCTTGGTTTGGGAGACAAGCAATAATTTGGATTGTAGATATGTCCTCTTTAGGAGCATCAGTTGCATATTTTTATG
TTTCTTTTATAGTTTTAAAAGAATCTAAAAACACTAAAGATAAAATTTTAGCAGGAATAGGAGTGGTAATAAGTATAATT
TTTATGCTTTTATTAATTTTACCTATTTCACCAGCAGCCTTATCTAAAGAGTCTTTAATAGCTTTAATAGTATGGTGTAT
AATAGGTTTTATTGCATACTATAAAATTCAAAAGGATAATATAGAAGCATAA

Upstream 100 bases:

>100_bases
AATAATAAATAGAGATAAAAAATAGTTTAAAAAGCTATAATTGGTTAATATAAAATAAAACTAATTATAGCTTTATTTTC
TTAAATGAATGGAGATAATG

Downstream 100 bases:

>100_bases
CATTTATTTTATGATAAATAAAACATATAAAGTTATTTAATTAATATTTAAAATAGAAAATATCATCTTGAAACAAACAT
GAAAACAACCTAAGGTAAGT

Product: amino acid ABC transporter permease

Products: NA

Alternate protein names: Amino Acid Transporter; Cationic Amino Acid Transporter; Amino Acid Permease; Amino Acid Permease Family Protein; Amino Acid/Polyamine Transporter I; APC Family Transporter; Amino Acid Permease-Associated Protein; Cationic Amino Acid Transporter APC Family; Amino Acid Transporters; APC Family Amino Acid-Polyamine-Organocation Transporter; Amino Acid Permease RocC

Number of amino acids: Translated: 443; Mature: 443

Protein sequence:

>443_residues
MKEIKLSRIDIFSIVLGAIIGWGSFMLPGTKFLKESGVINTFLGLFLGVICIIIIEKNYLIMMQTHDEEGGEFSFTYNNL
GKKHGFIVGWFLTLAYFTMIPLNATAFPLVIKKIFGGILEFGYLYNVAGYNIYLGEILTSSIIIIAFAALNLNGIKKTSK
VQNLIIFSLISMTFIVLVGMIIKGNRIDFINTYINKYSFDLSQIIKVFAITPFAFIGFDAIPQLSKELNFSKKKASRVAV
ISLVMGALIYNILNIITALAYSPEQASSLEWAAGSAVLSILGKGAFFLLIIALTAAVWSGINGFMICSSKLLGSIANYKM
LPSKMGKVNKNGVFSNAIIFITIVSLIAPWFGRQAIIWIVDMSSLGASVAYFYVSFIVLKESKNTKDKILAGIGVVISII
FMLLLILPISPAALSKESLIALIVWCIIGFIAYYKIQKDNIEA

Sequences:

>Translated_443_residues
MKEIKLSRIDIFSIVLGAIIGWGSFMLPGTKFLKESGVINTFLGLFLGVICIIIIEKNYLIMMQTHDEEGGEFSFTYNNL
GKKHGFIVGWFLTLAYFTMIPLNATAFPLVIKKIFGGILEFGYLYNVAGYNIYLGEILTSSIIIIAFAALNLNGIKKTSK
VQNLIIFSLISMTFIVLVGMIIKGNRIDFINTYINKYSFDLSQIIKVFAITPFAFIGFDAIPQLSKELNFSKKKASRVAV
ISLVMGALIYNILNIITALAYSPEQASSLEWAAGSAVLSILGKGAFFLLIIALTAAVWSGINGFMICSSKLLGSIANYKM
LPSKMGKVNKNGVFSNAIIFITIVSLIAPWFGRQAIIWIVDMSSLGASVAYFYVSFIVLKESKNTKDKILAGIGVVISII
FMLLLILPISPAALSKESLIALIVWCIIGFIAYYKIQKDNIEA
>Mature_443_residues
MKEIKLSRIDIFSIVLGAIIGWGSFMLPGTKFLKESGVINTFLGLFLGVICIIIIEKNYLIMMQTHDEEGGEFSFTYNNL
GKKHGFIVGWFLTLAYFTMIPLNATAFPLVIKKIFGGILEFGYLYNVAGYNIYLGEILTSSIIIIAFAALNLNGIKKTSK
VQNLIIFSLISMTFIVLVGMIIKGNRIDFINTYINKYSFDLSQIIKVFAITPFAFIGFDAIPQLSKELNFSKKKASRVAV
ISLVMGALIYNILNIITALAYSPEQASSLEWAAGSAVLSILGKGAFFLLIIALTAAVWSGINGFMICSSKLLGSIANYKM
LPSKMGKVNKNGVFSNAIIFITIVSLIAPWFGRQAIIWIVDMSSLGASVAYFYVSFIVLKESKNTKDKILAGIGVVISII
FMLLLILPISPAALSKESLIALIVWCIIGFIAYYKIQKDNIEA

Specific function: Unknown

COG id: COG0531

COG function: function code E; Amino acid transporters

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48705; Mature: 48705

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHEEECCCCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA