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The map label for this gene is splB [H]

Identifier: 18309706

GI number: 18309706

Start: 899303

End: 900331

Strand: Direct

Name: splB [H]

Synonym: CPE0724

Alternate gene names: 18309706

Gene position: 899303-900331 (Clockwise)

Preceding gene: 18309705

Following gene: 18309707

Centisome position: 29.67

GC content: 27.02

Gene sequence:

>1029_bases
ATGTTTATGTTTAAGCCAAAAAGAATTTTATTTGAGAAAAATTCATTAAATTATGAAATGGGAAGAAATATCTATAATTA
TTTTAAGGAATATAAAGATATAGAGATTATTGAGCTTAAAAATAATAGAATAAAGCAAAATATACCTGGAGATGATATAA
AGGAATTTTATAAAGAGGGAAAGAGTACAATTGTGGTTGGGGTTAAGAGAGTAGGAAAGTTTCAGTCATGTAAACCATCA
GCGCATTGGCAATTACCATTACTAAGTGGTTGCGTTGGCAATTGTCAATATTGTTATTTAAATACTAATTTAGGGGATAA
ACCTTATGTAAAAATAAATGTTAATGTAGAGGATATATTAAATCAGGCTCAAAAATATATTGATGAAAGAAAACCTAATA
TCACCATATTTGAAGGGTCAGCCACATCTGATCCTATACCAGTTGAACCATATACTAATTCCTTAAAGAGAGCAATAGAA
TTTTTTGCAAATAATGATTTTGCAAGATTTAGGTTTGTAACAAAATATACAGATGTTGATTCATTATTAGGTTTAGATCA
TAATGGCAAGACGGAAGTAAGATTTACTATAAATACTGATTTTGTAATAAATAATTATGAGAGAAGAACAGCATCTCTTT
GTGAAAGAATAAAGGCCAGTGTGAAAATAGCTAAGGCTAATTATCCATTAGGGTTTATAATTGCTCCAGTATTCATATAT
GAGGGATGGAAAGAGGATTATGAGAACTTATTAAAGGATTTAAAAGAAAAATTACCAAGTGATTTAAAACACAAATTAAC
TTTTGAGGTTATTTCTCATAGGTATACTACAAGGGCTAAAAATATAATAATGGATATATTTCCAGATAATAAATTGCCTA
TGGATGATGAAAAGAGGACTTTTAAATATGGTCAATTTGGCTATGGAAAATATGTTTATAAAAAAGAAGATATACATGAA
ATAAAAGAGTTTTTTATGGAGATAATAGATAAATATTTTCCAATGAGTGAAATAAAATATATTATTTAA

Upstream 100 bases:

>100_bases
ATAATACATTTTATATATGAAAATTAAGAATAATAGTAGTGTTTACTACTATTATTTTTTTTATATTTAGTAAATTAAAA
AAATATTATGAATGGAGATA

Downstream 100 bases:

>100_bases
AAAATTAGTACACTTAGAGTCTTTAAAATGAGTTTATTTAATATGATTTTGTAAAAGTAGCTAAGAGTTAAAAGCAATTA
AAAAAACATCTTGAAGTTTT

Product: spore photoproduct lyase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 342; Mature: 342

Protein sequence:

>342_residues
MFMFKPKRILFEKNSLNYEMGRNIYNYFKEYKDIEIIELKNNRIKQNIPGDDIKEFYKEGKSTIVVGVKRVGKFQSCKPS
AHWQLPLLSGCVGNCQYCYLNTNLGDKPYVKINVNVEDILNQAQKYIDERKPNITIFEGSATSDPIPVEPYTNSLKRAIE
FFANNDFARFRFVTKYTDVDSLLGLDHNGKTEVRFTINTDFVINNYERRTASLCERIKASVKIAKANYPLGFIIAPVFIY
EGWKEDYENLLKDLKEKLPSDLKHKLTFEVISHRYTTRAKNIIMDIFPDNKLPMDDEKRTFKYGQFGYGKYVYKKEDIHE
IKEFFMEIIDKYFPMSEIKYII

Sequences:

>Translated_342_residues
MFMFKPKRILFEKNSLNYEMGRNIYNYFKEYKDIEIIELKNNRIKQNIPGDDIKEFYKEGKSTIVVGVKRVGKFQSCKPS
AHWQLPLLSGCVGNCQYCYLNTNLGDKPYVKINVNVEDILNQAQKYIDERKPNITIFEGSATSDPIPVEPYTNSLKRAIE
FFANNDFARFRFVTKYTDVDSLLGLDHNGKTEVRFTINTDFVINNYERRTASLCERIKASVKIAKANYPLGFIIAPVFIY
EGWKEDYENLLKDLKEKLPSDLKHKLTFEVISHRYTTRAKNIIMDIFPDNKLPMDDEKRTFKYGQFGYGKYVYKKEDIHE
IKEFFMEIIDKYFPMSEIKYII
>Mature_342_residues
MFMFKPKRILFEKNSLNYEMGRNIYNYFKEYKDIEIIELKNNRIKQNIPGDDIKEFYKEGKSTIVVGVKRVGKFQSCKPS
AHWQLPLLSGCVGNCQYCYLNTNLGDKPYVKINVNVEDILNQAQKYIDERKPNITIFEGSATSDPIPVEPYTNSLKRAIE
FFANNDFARFRFVTKYTDVDSLLGLDHNGKTEVRFTINTDFVINNYERRTASLCERIKASVKIAKANYPLGFIIAPVFIY
EGWKEDYENLLKDLKEKLPSDLKHKLTFEVISHRYTTRAKNIIMDIFPDNKLPMDDEKRTFKYGQFGYGKYVYKKEDIHE
IKEFFMEIIDKYFPMSEIKYII

Specific function: Involved in repair of UV radiation-induced DNA damage during spore germination. Can repair thymine dimer 5-thyminyl-5,6- dihydrothymine (known as spore photoproduct (SP)) by in situ monomerization of SP to two thymines [H]

COG id: COG1533

COG function: function code L; DNA repair photolyase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the radical SAM superfamily. SPL family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: =4.1.99.14 [H]

Molecular weight: Translated: 40331; Mature: 40331

Theoretical pI: Translated: 9.04; Mature: 9.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFMFKPKRILFEKNSLNYEMGRNIYNYFKEYKDIEIIELKNNRIKQNIPGDDIKEFYKEG
CCCCCCCHHEEECCCCCHHHHHHHHHHHHHCCCEEEEEECCCEECCCCCCHHHHHHHHCC
KSTIVVGVKRVGKFQSCKPSAHWQLPLLSGCVGNCQYCYLNTNLGDKPYVKINVNVEDIL
CCEEEEEHHHCCCCCCCCCCCCCCCHHHHCCCCCCEEEEEECCCCCCCEEEEECCHHHHH
NQAQKYIDERKPNITIFEGSATSDPIPVEPYTNSLKRAIEFFANNDFARFRFVTKYTDVD
HHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCHH
SLLGLDHNGKTEVRFTINTDFVINNYERRTASLCERIKASVKIAKANYPLGFIIAPVFIY
HHHCCCCCCCEEEEEEEECCEEEECHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHH
EGWKEDYENLLKDLKEKLPSDLKHKLTFEVISHRYTTRAKNIIMDIFPDNKLPMDDEKRT
CCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCC
FKYGQFGYGKYVYKKEDIHEIKEFFMEIIDKYFPMSEIKYII
EECCCCCCCEEEECHHHHHHHHHHHHHHHHHHCCHHHHHCCC
>Mature Secondary Structure
MFMFKPKRILFEKNSLNYEMGRNIYNYFKEYKDIEIIELKNNRIKQNIPGDDIKEFYKEG
CCCCCCCHHEEECCCCCHHHHHHHHHHHHHCCCEEEEEECCCEECCCCCCHHHHHHHHCC
KSTIVVGVKRVGKFQSCKPSAHWQLPLLSGCVGNCQYCYLNTNLGDKPYVKINVNVEDIL
CCEEEEEHHHCCCCCCCCCCCCCCCHHHHCCCCCCEEEEEECCCCCCCEEEEECCHHHHH
NQAQKYIDERKPNITIFEGSATSDPIPVEPYTNSLKRAIEFFANNDFARFRFVTKYTDVD
HHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCHH
SLLGLDHNGKTEVRFTINTDFVINNYERRTASLCERIKASVKIAKANYPLGFIIAPVFIY
HHHCCCCCCCEEEEEEEECCEEEECHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHH
EGWKEDYENLLKDLKEKLPSDLKHKLTFEVISHRYTTRAKNIIMDIFPDNKLPMDDEKRT
CCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCC
FKYGQFGYGKYVYKKEDIHEIKEFFMEIIDKYFPMSEIKYII
EECCCCCCCEEEECHHHHHHHHHHHHHHHHHHCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11466286 [H]