| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is 18309680
Identifier: 18309680
GI number: 18309680
Start: 873958
End: 874251
Strand: Direct
Name: 18309680
Synonym: CPE0698
Alternate gene names: NA
Gene position: 873958-874251 (Clockwise)
Preceding gene: 161485643
Following gene: 18309681
Centisome position: 28.83
GC content: 27.21
Gene sequence:
>294_bases TTGAGTGACAAGTTAGCTCAATGTAGGAAAGAAATCGATAGAATAGATGGGGAACTTATGAAACTTTTTGAAGAAAGAAT GAATGTTGTCTTGGATGTTGCAAGATACAAAAAAGAAAATAATATGGAAATTTTTCATAAAGATAGAGAAAATCAAGTTA TAGAGAAAAATCTAAGTCGAGTAAAAAATAAAGAACTTTTACCTTATGCAGAGGAGATGCTTCATGCATTAATGGATATA AGTAAAGAATATCAAAAATATAAAATAGGTATGAGAGAAAATTTCATTAAGTAA
Upstream 100 bases:
>100_bases TTTAAAAATATTTCAAAGTGATTCACTTTATCAAAGTTCTAGATTAAATTAGTATTTACTTAAAAAAGATTAAAGAAGTT AAAAGAAAAGAGGTGAAATT
Downstream 100 bases:
>100_bases AATGAAATAAAATTTTATTTTAAGTGGGAAAAAGGATTATTTAGAGAAGAGGCCTTAATTGAATAATAGAGCATAATTTA ATTGGAATTAGAGGAAAAAA
Product: chorismate mutase
Products: prephenate
Alternate protein names: P-Protein
Number of amino acids: Translated: 97; Mature: 96
Protein sequence:
>97_residues MSDKLAQCRKEIDRIDGELMKLFEERMNVVLDVARYKKENNMEIFHKDRENQVIEKNLSRVKNKELLPYAEEMLHALMDI SKEYQKYKIGMRENFIK
Sequences:
>Translated_97_residues MSDKLAQCRKEIDRIDGELMKLFEERMNVVLDVARYKKENNMEIFHKDRENQVIEKNLSRVKNKELLPYAEEMLHALMDI SKEYQKYKIGMRENFIK >Mature_96_residues SDKLAQCRKEIDRIDGELMKLFEERMNVVLDVARYKKENNMEIFHKDRENQVIEKNLSRVKNKELLPYAEEMLHALMDIS KEYQKYKIGMRENFIK
Specific function: Unknown
COG id: COG1605
COG function: function code E; Chorismate mutase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 5.4.99.5
Molecular weight: Translated: 11783; Mature: 11652
Theoretical pI: Translated: 8.45; Mature: 8.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 7.2 %Met (Translated Protein) 8.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 6.2 %Met (Mature Protein) 7.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDKLAQCRKEIDRIDGELMKLFEERMNVVLDVARYKKENNMEIFHKDRENQVIEKNLSR CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHHH VKNKELLPYAEEMLHALMDISKEYQKYKIGMRENFIK HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SDKLAQCRKEIDRIDGELMKLFEERMNVVLDVARYKKENNMEIFHKDRENQVIEKNLSR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHHH VKNKELLPYAEEMLHALMDISKEYQKYKIGMRENFIK HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: chorismate
Specific reaction: chorismate = prephenate
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA