Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

Click here to switch to the map view.

The map label for this gene is tal [H]

Identifier: 18309674

GI number: 18309674

Start: 862390

End: 863037

Strand: Direct

Name: tal [H]

Synonym: CPE0692

Alternate gene names: 18309674

Gene position: 862390-863037 (Clockwise)

Preceding gene: 18309671

Following gene: 18309675

Centisome position: 28.45

GC content: 31.79

Gene sequence:

>648_bases
ATGAAAATATTTATCGATACTGCCAATGTAGAAGAAATAAGAAAAGCTAGTAAATTAGGAGTTTTAGCTGGAGTAACAAC
TAACCCTTCATTAATAGCAAAAGAAGGCAGAGATATTAAAGAAGTAATTGAAGAAATATGTAGCATAGTAGATGGACCAA
TAAGTGCTGAAGTTATGGCTTTAGAGTGCGACGAAATGGTTAGAGAAGGAAGAGAATTAGCTAAAATACATAAAAACATA
GTTATAAAAATACCTATGTGTGAAGAAGGTTTAAAAGCTGTAAAAGTATTAGCTAGTGAAGGAATAAGAACAAATGTTAC
TTTAATCTTCTCACCATTACAAGCTTTATTAGCAGCTAGAGCTGGTGCATCATTCGTAAGTCCATTCTTAGGAAGACTTG
ATGATATAGGAAATCCAGGAATTGAAATTGTAACTCAAATCGCTGAAATGTTTGCTTTACATGGAATAGACACTGAAATA
ATATCTGCAAGTGTTAGAAACCCAATGCATGTTTTAGATTCAGCTATGGCAGGATCACACATTGCAACAATTCCTTATAA
TGTTATACTTCAAATGGTAAAACATCCTTTAACTGATGCTGGTATGAAAAAATTCATTGAAGATTATAACAAAGCTTTCA
ATAAATAA

Upstream 100 bases:

>100_bases
AATTCTTTTTGTAATGTTAATATCTATCTGTGGAAACGATTAATAGAAAAGTATGGAATTCAAATTAATATTTTTAAAGT
AATGAAAAGGAGATTATGAA

Downstream 100 bases:

>100_bases
TATAATCTGCATTTACAATATAAATTAATACATTAAATTATATTTATAAAAGAATATATTTTACTTATAGTCAACAATTA
ACCCTTAAAAGAACTATCTA

Product: putative translaldolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 215; Mature: 215

Protein sequence:

>215_residues
MKIFIDTANVEEIRKASKLGVLAGVTTNPSLIAKEGRDIKEVIEEICSIVDGPISAEVMALECDEMVREGRELAKIHKNI
VIKIPMCEEGLKAVKVLASEGIRTNVTLIFSPLQALLAARAGASFVSPFLGRLDDIGNPGIEIVTQIAEMFALHGIDTEI
ISASVRNPMHVLDSAMAGSHIATIPYNVILQMVKHPLTDAGMKKFIEDYNKAFNK

Sequences:

>Translated_215_residues
MKIFIDTANVEEIRKASKLGVLAGVTTNPSLIAKEGRDIKEVIEEICSIVDGPISAEVMALECDEMVREGRELAKIHKNI
VIKIPMCEEGLKAVKVLASEGIRTNVTLIFSPLQALLAARAGASFVSPFLGRLDDIGNPGIEIVTQIAEMFALHGIDTEI
ISASVRNPMHVLDSAMAGSHIATIPYNVILQMVKHPLTDAGMKKFIEDYNKAFNK
>Mature_215_residues
MKIFIDTANVEEIRKASKLGVLAGVTTNPSLIAKEGRDIKEVIEEICSIVDGPISAEVMALECDEMVREGRELAKIHKNI
VIKIPMCEEGLKAVKVLASEGIRTNVTLIFSPLQALLAARAGASFVSPFLGRLDDIGNPGIEIVTQIAEMFALHGIDTEI
ISASVRNPMHVLDSAMAGSHIATIPYNVILQMVKHPLTDAGMKKFIEDYNKAFNK

Specific function: Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway [H]

COG id: COG0176

COG function: function code G; Transaldolase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transaldolase family. Type 3B subfamily [H]

Homologues:

Organism=Homo sapiens, GI5803187, Length=174, Percent_Identity=30.4597701149425, Blast_Score=74, Evalue=1e-13,
Organism=Escherichia coli, GI87081788, Length=217, Percent_Identity=35.9447004608295, Blast_Score=156, Evalue=8e-40,
Organism=Escherichia coli, GI1790382, Length=216, Percent_Identity=37.037037037037, Blast_Score=141, Evalue=4e-35,
Organism=Escherichia coli, GI1786189, Length=163, Percent_Identity=31.2883435582822, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI1788807, Length=171, Percent_Identity=29.8245614035088, Blast_Score=75, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI25153750, Length=173, Percent_Identity=29.4797687861272, Blast_Score=66, Evalue=1e-11,
Organism=Saccharomyces cerevisiae, GI6321480, Length=226, Percent_Identity=29.2035398230088, Blast_Score=77, Evalue=1e-15,
Organism=Drosophila melanogaster, GI45549185, Length=164, Percent_Identity=31.0975609756098, Blast_Score=74, Evalue=5e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR001585
- InterPro:   IPR004731
- InterPro:   IPR022999
- InterPro:   IPR018225 [H]

Pfam domain/function: PF00923 Transaldolase [H]

EC number: =2.2.1.2 [H]

Molecular weight: Translated: 23352; Mature: 23352

Theoretical pI: Translated: 5.67; Mature: 5.67

Prosite motif: PS01054 TRANSALDOLASE_1 ; PS00958 TRANSALDOLASE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIFIDTANVEEIRKASKLGVLAGVTTNPSLIAKEGRDIKEVIEEICSIVDGPISAEVMA
CEEEEECCCHHHHHHHHHHHHEECCCCCCHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHH
LECDEMVREGRELAKIHKNIVIKIPMCEEGLKAVKVLASEGIRTNVTLIFSPLQALLAAR
HHHHHHHHHHHHHHHHHHCEEEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
AGASFVSPFLGRLDDIGNPGIEIVTQIAEMFALHGIDTEIISASVRNPMHVLDSAMAGSH
CCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHCCCC
IATIPYNVILQMVKHPLTDAGMKKFIEDYNKAFNK
CHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKIFIDTANVEEIRKASKLGVLAGVTTNPSLIAKEGRDIKEVIEEICSIVDGPISAEVMA
CEEEEECCCHHHHHHHHHHHHEECCCCCCHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHH
LECDEMVREGRELAKIHKNIVIKIPMCEEGLKAVKVLASEGIRTNVTLIFSPLQALLAAR
HHHHHHHHHHHHHHHHHHCEEEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
AGASFVSPFLGRLDDIGNPGIEIVTQIAEMFALHGIDTEIISASVRNPMHVLDSAMAGSH
CCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHCCCC
IATIPYNVILQMVKHPLTDAGMKKFIEDYNKAFNK
CHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA