| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is purM [H]
Identifier: 18309666
GI number: 18309666
Start: 852104
End: 853105
Strand: Direct
Name: purM [H]
Synonym: CPE0684
Alternate gene names: 18309666
Gene position: 852104-853105 (Clockwise)
Preceding gene: 18309665
Following gene: 18309667
Centisome position: 28.11
GC content: 31.64
Gene sequence:
>1002_bases ATGCTAACTTACAAAGAAGCAGGAGTAAATATTGAAGAAGGATATAGATCAGTAAAATTAATAAAAGAATATGCAAAAAA AACAATGAGTGAATATGTATTAAATGGATTAGGATCTTTTGCTGGCATGATTGAACTTCCAGAGGGATATAAAAAACCAG TTTTAGTTTCTGGAACAGATGGAGTGGGAACAAAACTTGATATTGCTTGTAAGAAAAGAAAGTTTGATACTGTTGGAATT GACTGTGTTGCAATGTGTGTCAATGATATTTTATGTCATGGTGCTAAACCATTATTCTTCTTAGATTATATAGCTTGTGG AAAACTTGAAGCTGAGGTTTCTTCTGATTTGGTAAAGGGAGTAGCTGAAGGATGTATTAAGTCTCAGTGCTCTTTAATTG GAGGAGAAACTGCTGAAATGCCAGGTATGTATAAAGAAGGAGACTATGATATTGCTGGTTTTGCAGTAGGAATAGTAGAC AAGGATAAAATAATAAATGGTAAAGATATAAAGAGTGGTGACAAGCTTATAGGAATTGCTTCTTCAGGAGTTCATTCAAA TGGATATTCTCTTATAAGAAAGGTGTTTAAAAACTTAGATGAAGATTTTAATGGAAAAGCTATTTGGGAAGAATTATTAA CTCCTACAAAGATTTATGTTAAACCTGTATTAAGTCTTTTAGAAAAATTTAATATTAAGGGTATGGCTCATGTAACTGGG GGAGGATTTTATGAAAATCTTCCAAGAATGTTAAGTAAAGAAGGACTTAGTATAGTAATAAATAAAAATAGCTATGAGAT TCCAGAAATATTTAAAAAGCTTATGGAACTTGGAGTTAAAGAAGAGGAAATGTATAACACTTTCAACATGGGTATAGGGT TTGTTTTATGTGTTGAGGAAGATGAGGTTGAAGAAGTTTTAAAAGAACTTTCAAAGCAAGGAGAAAAAGCTTTTGAGATT GGGTATATAAATGCTGGAGGTGAAGGAGTTTGTATAAAATAG
Upstream 100 bases:
>100_bases AGGTAGAAGAAATTTCTGTGTAGGATGCTTTAGTGGGGTTTATCCAGTTGCAGCGCCTATGGAAGCTTTAGAGGATAATC TTGAAAGGGTGGAGAATTAA
Downstream 100 bases:
>100_bases CTGTATTAGCTTCTGGCAGTGGATCTAACCTTCAATCAATTTTAGATAATATAAATAATGGGAATATAAAGGGAGAAGTT TCTTTGGTTATTGGAAGTAA
Product: phosphoribosylaminoimidazole synthetase
Products: NA
Alternate protein names: AIR synthase; AIRS; Phosphoribosyl-aminoimidazole synthetase [H]
Number of amino acids: Translated: 333; Mature: 333
Protein sequence:
>333_residues MLTYKEAGVNIEEGYRSVKLIKEYAKKTMSEYVLNGLGSFAGMIELPEGYKKPVLVSGTDGVGTKLDIACKKRKFDTVGI DCVAMCVNDILCHGAKPLFFLDYIACGKLEAEVSSDLVKGVAEGCIKSQCSLIGGETAEMPGMYKEGDYDIAGFAVGIVD KDKIINGKDIKSGDKLIGIASSGVHSNGYSLIRKVFKNLDEDFNGKAIWEELLTPTKIYVKPVLSLLEKFNIKGMAHVTG GGFYENLPRMLSKEGLSIVINKNSYEIPEIFKKLMELGVKEEEMYNTFNMGIGFVLCVEEDEVEEVLKELSKQGEKAFEI GYINAGGEGVCIK
Sequences:
>Translated_333_residues MLTYKEAGVNIEEGYRSVKLIKEYAKKTMSEYVLNGLGSFAGMIELPEGYKKPVLVSGTDGVGTKLDIACKKRKFDTVGI DCVAMCVNDILCHGAKPLFFLDYIACGKLEAEVSSDLVKGVAEGCIKSQCSLIGGETAEMPGMYKEGDYDIAGFAVGIVD KDKIINGKDIKSGDKLIGIASSGVHSNGYSLIRKVFKNLDEDFNGKAIWEELLTPTKIYVKPVLSLLEKFNIKGMAHVTG GGFYENLPRMLSKEGLSIVINKNSYEIPEIFKKLMELGVKEEEMYNTFNMGIGFVLCVEEDEVEEVLKELSKQGEKAFEI GYINAGGEGVCIK >Mature_333_residues MLTYKEAGVNIEEGYRSVKLIKEYAKKTMSEYVLNGLGSFAGMIELPEGYKKPVLVSGTDGVGTKLDIACKKRKFDTVGI DCVAMCVNDILCHGAKPLFFLDYIACGKLEAEVSSDLVKGVAEGCIKSQCSLIGGETAEMPGMYKEGDYDIAGFAVGIVD KDKIINGKDIKSGDKLIGIASSGVHSNGYSLIRKVFKNLDEDFNGKAIWEELLTPTKIYVKPVLSLLEKFNIKGMAHVTG GGFYENLPRMLSKEGLSIVINKNSYEIPEIFKKLMELGVKEEEMYNTFNMGIGFVLCVEEDEVEEVLKELSKQGEKAFEI GYINAGGEGVCIK
Specific function: De novo purine biosynthesis; fifth step. [C]
COG id: COG0150
COG function: function code F; Phosphoribosylaminoimidazole (AIR) synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AIR synthase family [H]
Homologues:
Organism=Homo sapiens, GI4503915, Length=339, Percent_Identity=47.1976401179941, Blast_Score=297, Evalue=7e-81, Organism=Homo sapiens, GI209869995, Length=339, Percent_Identity=47.1976401179941, Blast_Score=297, Evalue=7e-81, Organism=Homo sapiens, GI209869993, Length=339, Percent_Identity=47.1976401179941, Blast_Score=297, Evalue=7e-81, Organism=Escherichia coli, GI1788845, Length=330, Percent_Identity=50.6060606060606, Blast_Score=342, Evalue=3e-95, Organism=Caenorhabditis elegans, GI17567511, Length=345, Percent_Identity=42.8985507246377, Blast_Score=257, Evalue=7e-69, Organism=Saccharomyces cerevisiae, GI6321203, Length=336, Percent_Identity=42.8571428571429, Blast_Score=278, Evalue=6e-76, Organism=Drosophila melanogaster, GI24582400, Length=293, Percent_Identity=44.3686006825939, Blast_Score=240, Evalue=1e-63,
Paralogues:
None
Copy number: 180 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000728 - InterPro: IPR010918 - InterPro: IPR004733 - InterPro: IPR016188 [H]
Pfam domain/function: PF00586 AIRS; PF02769 AIRS_C [H]
EC number: =6.3.3.1 [H]
Molecular weight: Translated: 36454; Mature: 36454
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTYKEAGVNIEEGYRSVKLIKEYAKKTMSEYVLNGLGSFAGMIELPEGYKKPVLVSGTD CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCCEEEECCC GVGTKLDIACKKRKFDTVGIDCVAMCVNDILCHGAKPLFFLDYIACGKLEAEVSSDLVKG CCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHH VAEGCIKSQCSLIGGETAEMPGMYKEGDYDIAGFAVGIVDKDKIINGKDIKSGDKLIGIA HHHHHHHHHHHHCCCCCHHCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCEEEEE SSGVHSNGYSLIRKVFKNLDEDFNGKAIWEELLTPTKIYVKPVLSLLEKFNIKGMAHVTG CCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEECC GGFYENLPRMLSKEGLSIVINKNSYEIPEIFKKLMELGVKEEEMYNTFNMGIGFVLCVEE CHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCEEEEEECH DEVEEVLKELSKQGEKAFEIGYINAGGEGVCIK HHHHHHHHHHHHCCCCEEEEEEEECCCCEEEEC >Mature Secondary Structure MLTYKEAGVNIEEGYRSVKLIKEYAKKTMSEYVLNGLGSFAGMIELPEGYKKPVLVSGTD CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCCEEEECCC GVGTKLDIACKKRKFDTVGIDCVAMCVNDILCHGAKPLFFLDYIACGKLEAEVSSDLVKG CCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHH VAEGCIKSQCSLIGGETAEMPGMYKEGDYDIAGFAVGIVDKDKIINGKDIKSGDKLIGIA HHHHHHHHHHHHCCCCCHHCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCEEEEE SSGVHSNGYSLIRKVFKNLDEDFNGKAIWEELLTPTKIYVKPVLSLLEKFNIKGMAHVTG CCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEECC GGFYENLPRMLSKEGLSIVINKNSYEIPEIFKKLMELGVKEEEMYNTFNMGIGFVLCVEE CHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCEEEEEECH DEVEEVLKELSKQGEKAFEIGYINAGGEGVCIK HHHHHHHHHHHHCCCCEEEEEEEECCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA