| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is 18309603
Identifier: 18309603
GI number: 18309603
Start: 777225
End: 778073
Strand: Direct
Name: 18309603
Synonym: CPE0621
Alternate gene names: NA
Gene position: 777225-778073 (Clockwise)
Preceding gene: 18309602
Following gene: 18309604
Centisome position: 25.64
GC content: 26.15
Gene sequence:
>849_bases ATGATTAGAAAATTTTCATTGATAATGGCTACCTATGGGAGAAAAGATGAAGTAGGGTGTTTTCTTGAAAGTCTAATGAA TTCAAATTATCCAATGGATAAAGTTGAAGTAATCATTGTTGATCAAAATAAAGAAATAGACTTAGAGCCCATAATTAGTA AATATAAAGAAAAAATAAAAGTGGTTCACATAAAATCTAATGAAAGAGGATTAGCTTTAAATAGAAATAAGGGGTTAGAG ATAGCAACTGGAGATATAATAGCTTTTCCAGATGATGATTGTGAATATCTAGTAGATACCCTTAATATAGTTAATAATTA CTTTGAAAATGAACATTGTGACTTATTAATGGGAAGAATTGTTGAGCGTAATGGTGAAGATTCACTTAGGGAGTGGCCTA AAGAGAAGATAGAAATAAATAAAAATAACTTTTATACAAAGTGTTCTTCAGTAACTATGTTTTTAGATAGTAAAAAATGC TTTGTAAAATTTAATGATCAATTAGGAGCAGGTAAATATTTTGGAGCTTGTGAAGATGCAGATTTGATATATAAAAACTG TAAAAAGGGTCTAAAAATAATATATAATCCAGAACTTCAAATATATCATCCACATTATGATTCAAATAGCAATATGGATG ATAAGAAAATATATAGTTATGGTTTAGGATTTGGTGCAATGGTAAAATCAAATTTTGATTTTTCTATGCTAATATTATTT ATTAAGGCTGAGGGATATCATTTCTTAAAATCATTAATATATTTAATAACATTTAAGACAACTAAGTCAAAAAGAAGTTG GCTTGCTTTTAAAAGTAGAATAAAAGGATTTTTTGAATATAAAAATTAA
Upstream 100 bases:
>100_bases TAGTTTGTTTACAATACTTAGGATATGATAATGATTTAGTAGTAACTTTAACACTATTAATTATAATAAATATGATTATG AAGAAAGATGAGCAAAGAAT
Downstream 100 bases:
>100_bases CCATAAAGCATAAAAGAATTTTGAAATATAAAATTCTTTTATGCATTTATAATATAATTTGCTTATGAAATAAGAGATTT TTAGGAGATAGTTATGAGTA
Product: glycosyltransferase
Products: NA
Alternate protein names: Glycosyl Transferase Family Protein; Glycosyl Transferase Group 2 Family Protein; Glycosyltransferase Protein; Glycoside Hydrolase Family 2 Protein; WecB/TagA/CpsF Family Glycosyl Transferase; Family 2 Glycosyl Transferase; Glycosyl Transferase
Number of amino acids: Translated: 282; Mature: 282
Protein sequence:
>282_residues MIRKFSLIMATYGRKDEVGCFLESLMNSNYPMDKVEVIIVDQNKEIDLEPIISKYKEKIKVVHIKSNERGLALNRNKGLE IATGDIIAFPDDDCEYLVDTLNIVNNYFENEHCDLLMGRIVERNGEDSLREWPKEKIEINKNNFYTKCSSVTMFLDSKKC FVKFNDQLGAGKYFGACEDADLIYKNCKKGLKIIYNPELQIYHPHYDSNSNMDDKKIYSYGLGFGAMVKSNFDFSMLILF IKAEGYHFLKSLIYLITFKTTKSKRSWLAFKSRIKGFFEYKN
Sequences:
>Translated_282_residues MIRKFSLIMATYGRKDEVGCFLESLMNSNYPMDKVEVIIVDQNKEIDLEPIISKYKEKIKVVHIKSNERGLALNRNKGLE IATGDIIAFPDDDCEYLVDTLNIVNNYFENEHCDLLMGRIVERNGEDSLREWPKEKIEINKNNFYTKCSSVTMFLDSKKC FVKFNDQLGAGKYFGACEDADLIYKNCKKGLKIIYNPELQIYHPHYDSNSNMDDKKIYSYGLGFGAMVKSNFDFSMLILF IKAEGYHFLKSLIYLITFKTTKSKRSWLAFKSRIKGFFEYKN >Mature_282_residues MIRKFSLIMATYGRKDEVGCFLESLMNSNYPMDKVEVIIVDQNKEIDLEPIISKYKEKIKVVHIKSNERGLALNRNKGLE IATGDIIAFPDDDCEYLVDTLNIVNNYFENEHCDLLMGRIVERNGEDSLREWPKEKIEINKNNFYTKCSSVTMFLDSKKC FVKFNDQLGAGKYFGACEDADLIYKNCKKGLKIIYNPELQIYHPHYDSNSNMDDKKIYSYGLGFGAMVKSNFDFSMLILF IKAEGYHFLKSLIYLITFKTTKSKRSWLAFKSRIKGFFEYKN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32854; Mature: 32854
Theoretical pI: Translated: 8.24; Mature: 8.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRKFSLIMATYGRKDEVGCFLESLMNSNYPMDKVEVIIVDQNKEIDLEPIISKYKEKIK CCEEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCHHHHHHHHHCCEE VVHIKSNERGLALNRNKGLEIATGDIIAFPDDDCEYLVDTLNIVNNYFENEHCDLLMGRI EEEEECCCCCEEEECCCCCEEEECCEEECCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHH VERNGEDSLREWPKEKIEINKNNFYTKCSSVTMFLDSKKCFVKFNDQLGAGKYFGACEDA HHCCCCHHHHHCCHHHEEECCCCEEEEECEEEEEEECCEEEEEECCCCCCCCCCCCCCCH DLIYKNCKKGLKIIYNPELQIYHPHYDSNSNMDDKKIYSYGLGFGAMVKSNFDFSMLILF HHHHHHHHCCCEEEECCCEEEECCCCCCCCCCCHHHHHHHCCCHHHHEECCCCCEEEEEE IKAEGYHFLKSLIYLITFKTTKSKRSWLAFKSRIKGFFEYKN EECCCHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHEECCC >Mature Secondary Structure MIRKFSLIMATYGRKDEVGCFLESLMNSNYPMDKVEVIIVDQNKEIDLEPIISKYKEKIK CCEEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCHHHHHHHHHCCEE VVHIKSNERGLALNRNKGLEIATGDIIAFPDDDCEYLVDTLNIVNNYFENEHCDLLMGRI EEEEECCCCCEEEECCCCCEEEECCEEECCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHH VERNGEDSLREWPKEKIEINKNNFYTKCSSVTMFLDSKKCFVKFNDQLGAGKYFGACEDA HHCCCCHHHHHCCHHHEEECCCCEEEEECEEEEEEECCEEEEEECCCCCCCCCCCCCCCH DLIYKNCKKGLKIIYNPELQIYHPHYDSNSNMDDKKIYSYGLGFGAMVKSNFDFSMLILF HHHHHHHHCCCEEEECCCEEEECCCCCCCCCCCHHHHHHHCCCHHHHEECCCCCEEEEEE IKAEGYHFLKSLIYLITFKTTKSKRSWLAFKSRIKGFFEYKN EECCCHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA