| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is yqgS [H]
Identifier: 18309585
GI number: 18309585
Start: 753127
End: 754935
Strand: Direct
Name: yqgS [H]
Synonym: CPE0603
Alternate gene names: 18309585
Gene position: 753127-754935 (Clockwise)
Preceding gene: 18309584
Following gene: 18309586
Centisome position: 24.84
GC content: 28.91
Gene sequence:
>1809_bases ATGAAGGAAAAAGTAAAAAGCTTTTTTAAGTGTAACTGGGTTTTTATTTTCTTAGTGATAACACTTCAAATAAAATCAAT GTTACTTTTATCTATGCTTAGAACCCCAGGGTCTAGAGGAATTAATTTTGACTTAATGTATTTTACTCCCCCTGCTTGGT GGGCTCATATAGCAATAGTTACGTTAATAGCGAGTTTTGTTTATCTATTTAAAGGTAAAGGAAGAATGTGGGCAGGTGTA GTTATTGATATTCTAGTGACAATTTTATTCGTGGCTGATATTTGGTATTACAGAGTAAATGGAACTTTTTTATCAATAAG ACATATAATTGAGCCAGGAATATTTAATCCTGTAGGAAAGAGCTTATTTAATTTAGCTAAAGTAGATGTAGTGTTCATAG TTGATTTTATAATATTATTTTTAGTTTATAACTTTACAGGTTTAAAAAATGTTAAATATAAAAATAATATAAAAACTAGA TTAATTGCATTTATATGCCTTTTTGGAATAAGTGCAACAGTAATAGGGGTATCACACTACTATATAGATATTCAAAGAAA ATCAGATAAAAGTTTTTTAAGAATATCATGGGCGCCTTTTCAAACAATTAGTGACTCAAGTCCATTAGGATATCATGGAT ATGATATTTATTATTATGCTAACAGAAAAGAAACTTTAACTGATGCTCAAAAAAATGAAATTAAAACTTGGTTTGATGAA AACAAAGAAGATTTACCAGATAACAAGTATAAAGGTATGCTTAAAGGAAAAAATGTTATAGCCTTGCAGGTTGAGTCTCT TGAAAACTTTGTTATAGGTAAAAAAGTTTATGGTCAAGAGATTACTCCAAACATAAATAAACTTTTAAAGAATAGTTTAT ATTTTGATAATATAAAAGAACAAAATAATTCAGGAACAAGTTCAGATTGCGATATAATGGTTAATACATCAATACTTCCT GTTAGAGAAGGAACTACAGTATTTGGGTATCCATGGGCTGAATATAATACTTTACAGAAAATATTAAAGAGTAAGGGATA TTCAACAGTTTCAACACATCCAGAGGTTCCTGGAAATTGGAACTGGGCAGAGGTTCATAAGGCATTTAAAGCTGATGAAA TATGGGATGCCCATCAGTTTGATCAAAGTGAAATAATAGGACTTGGAATGTCAGATGAGTCTTATTTAAGACAGGTTGGA GAAAGATTAAAGAGTCAAAAACAACCTTTCTATACATTCTTAGTAACATTAACAAGTCATGGACCATTTGATATGCCTAA GGATAAACAATATTTAAATTTACCAGAAGATTTAAATGAAAATATGTTAGGTGCATATTTCCAAAGTGTTAGATATACAG ATGAAGCTATTGGAGAATTTATAAATCAATTAAAAGAAGAAGGTCTTTTAGACAATACTGTAATAATGATTTATGGAGAT CATGGTGGAGTTCATAAATTCTACGAAGATAAAATAAAAGATGCTCCTTTAGAGGGAGATTGGTGGAAAGATGATGAAAA GGAAATACCTTTCTTAATATACAATCCAAGTATTAATGGAGAGACTATATCAAAAGAAGGTGGTCAAATAGATTTCTTAC CAACTATAGCATACCTTTTAGGATTTAATAGAGATACTTTTGATAGTACAGCAATGGGAAGAGTATTAGTAAATACTAAT AGAAATGCAAGCATATTAAATAATGGAGAAATAGTTGGAAATCCAACACCTGAAGAAAAAGCTCATTTAGAGAAATCATT TAATATTGCAGATATGATTATACAAGGAAATTATTTTAAAAATAATTAA
Upstream 100 bases:
>100_bases TAATTATTGAATAAATATTAATTATTTTTTAATGAAAATTTTACTGTAAATGTTATAATATTTAAGTAAATATTATATAG AAAGATAGTGAGGAAATTTT
Downstream 100 bases:
>100_bases TTAAATTTAAAGCTATTAGCTATATTTTTATTAGGATTTAGCTAATAGCTTTACATATGTTTTATTAGTTTTAATATTAG GAGGGTAAGTTATTAAAAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 602; Mature: 602
Protein sequence:
>602_residues MKEKVKSFFKCNWVFIFLVITLQIKSMLLLSMLRTPGSRGINFDLMYFTPPAWWAHIAIVTLIASFVYLFKGKGRMWAGV VIDILVTILFVADIWYYRVNGTFLSIRHIIEPGIFNPVGKSLFNLAKVDVVFIVDFIILFLVYNFTGLKNVKYKNNIKTR LIAFICLFGISATVIGVSHYYIDIQRKSDKSFLRISWAPFQTISDSSPLGYHGYDIYYYANRKETLTDAQKNEIKTWFDE NKEDLPDNKYKGMLKGKNVIALQVESLENFVIGKKVYGQEITPNINKLLKNSLYFDNIKEQNNSGTSSDCDIMVNTSILP VREGTTVFGYPWAEYNTLQKILKSKGYSTVSTHPEVPGNWNWAEVHKAFKADEIWDAHQFDQSEIIGLGMSDESYLRQVG ERLKSQKQPFYTFLVTLTSHGPFDMPKDKQYLNLPEDLNENMLGAYFQSVRYTDEAIGEFINQLKEEGLLDNTVIMIYGD HGGVHKFYEDKIKDAPLEGDWWKDDEKEIPFLIYNPSINGETISKEGGQIDFLPTIAYLLGFNRDTFDSTAMGRVLVNTN RNASILNNGEIVGNPTPEEKAHLEKSFNIADMIIQGNYFKNN
Sequences:
>Translated_602_residues MKEKVKSFFKCNWVFIFLVITLQIKSMLLLSMLRTPGSRGINFDLMYFTPPAWWAHIAIVTLIASFVYLFKGKGRMWAGV VIDILVTILFVADIWYYRVNGTFLSIRHIIEPGIFNPVGKSLFNLAKVDVVFIVDFIILFLVYNFTGLKNVKYKNNIKTR LIAFICLFGISATVIGVSHYYIDIQRKSDKSFLRISWAPFQTISDSSPLGYHGYDIYYYANRKETLTDAQKNEIKTWFDE NKEDLPDNKYKGMLKGKNVIALQVESLENFVIGKKVYGQEITPNINKLLKNSLYFDNIKEQNNSGTSSDCDIMVNTSILP VREGTTVFGYPWAEYNTLQKILKSKGYSTVSTHPEVPGNWNWAEVHKAFKADEIWDAHQFDQSEIIGLGMSDESYLRQVG ERLKSQKQPFYTFLVTLTSHGPFDMPKDKQYLNLPEDLNENMLGAYFQSVRYTDEAIGEFINQLKEEGLLDNTVIMIYGD HGGVHKFYEDKIKDAPLEGDWWKDDEKEIPFLIYNPSINGETISKEGGQIDFLPTIAYLLGFNRDTFDSTAMGRVLVNTN RNASILNNGEIVGNPTPEEKAHLEKSFNIADMIIQGNYFKNN >Mature_602_residues MKEKVKSFFKCNWVFIFLVITLQIKSMLLLSMLRTPGSRGINFDLMYFTPPAWWAHIAIVTLIASFVYLFKGKGRMWAGV VIDILVTILFVADIWYYRVNGTFLSIRHIIEPGIFNPVGKSLFNLAKVDVVFIVDFIILFLVYNFTGLKNVKYKNNIKTR LIAFICLFGISATVIGVSHYYIDIQRKSDKSFLRISWAPFQTISDSSPLGYHGYDIYYYANRKETLTDAQKNEIKTWFDE NKEDLPDNKYKGMLKGKNVIALQVESLENFVIGKKVYGQEITPNINKLLKNSLYFDNIKEQNNSGTSSDCDIMVNTSILP VREGTTVFGYPWAEYNTLQKILKSKGYSTVSTHPEVPGNWNWAEVHKAFKADEIWDAHQFDQSEIIGLGMSDESYLRQVG ERLKSQKQPFYTFLVTLTSHGPFDMPKDKQYLNLPEDLNENMLGAYFQSVRYTDEAIGEFINQLKEEGLLDNTVIMIYGD HGGVHKFYEDKIKDAPLEGDWWKDDEKEIPFLIYNPSINGETISKEGGQIDFLPTIAYLLGFNRDTFDSTAMGRVLVNTN RNASILNNGEIVGNPTPEEKAHLEKSFNIADMIIQGNYFKNN
Specific function: Unknown
COG id: COG1368
COG function: function code M; Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
Gene ontology:
Cell location: Processed uncharacterized protein yqgS:Secreted [H]
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the LTA synthase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017849 - InterPro: IPR017850 - InterPro: IPR012160 - InterPro: IPR000917 [H]
Pfam domain/function: PF00884 Sulfatase [H]
EC number: 3.1.6.- [C]
Molecular weight: Translated: 69035; Mature: 69035
Theoretical pI: Translated: 6.45; Mature: 6.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKEKVKSFFKCNWVFIFLVITLQIKSMLLLSMLRTPGSRGINFDLMYFTPPAWWAHIAIV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHH TLIASFVYLFKGKGRMWAGVVIDILVTILFVADIWYYRVNGTFLSIRHIIEPGIFNPVGK HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHEEEECCEEEEHHHHHCCCCCCHHHH SLFNLAKVDVVFIVDFIILFLVYNFTGLKNVKYKNNIKTRLIAFICLFGISATVIGVSHY HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCHHHHHHHHHHHHHHHHHEEEEEEE YIDIQRKSDKSFLRISWAPFQTISDSSPLGYHGYDIYYYANRKETLTDAQKNEIKTWFDE EEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHCC NKEDLPDNKYKGMLKGKNVIALQVESLENFVIGKKVYGQEITPNINKLLKNSLYFDNIKE CCCCCCCCHHCCCCCCCCEEEEEECCHHHHHHCCHHCCCCCCCCHHHHHHHHHHHCCHHH QNNSGTSSDCDIMVNTSILPVREGTTVFGYPWAEYNTLQKILKSKGYSTVSTHPEVPGNW CCCCCCCCCCEEEEECEEEEECCCCEEEECCCHHHHHHHHHHHHCCCCEECCCCCCCCCC NWAEVHKAFKADEIWDAHQFDQSEIIGLGMSDESYLRQVGERLKSQKQPFYTFLVTLTSH CHHHHHHHHHHHHCCCHHCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCEEEEEEEEECC GPFDMPKDKQYLNLPEDLNENMLGAYFQSVRYTDEAIGEFINQLKEEGLLDNTVIMIYGD CCCCCCCCCCCCCCCHHHCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEEEECC HGGVHKFYEDKIKDAPLEGDWWKDDEKEIPFLIYNPSINGETISKEGGQIDFLPTIAYLL CCCCHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCCEECCCCCEEEHHHHHHHHH GFNRDTFDSTAMGRVLVNTNRNASILNNGEIVGNPTPEEKAHLEKSFNIADMIIQGNYFK CCCCCCCCCCCCCEEEEECCCCCEEEECCEEECCCCCHHHHHHHHCCCHHHEEEECCEEC NN CC >Mature Secondary Structure MKEKVKSFFKCNWVFIFLVITLQIKSMLLLSMLRTPGSRGINFDLMYFTPPAWWAHIAIV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHH TLIASFVYLFKGKGRMWAGVVIDILVTILFVADIWYYRVNGTFLSIRHIIEPGIFNPVGK HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHEEEECCEEEEHHHHHCCCCCCHHHH SLFNLAKVDVVFIVDFIILFLVYNFTGLKNVKYKNNIKTRLIAFICLFGISATVIGVSHY HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCHHHHHHHHHHHHHHHHHEEEEEEE YIDIQRKSDKSFLRISWAPFQTISDSSPLGYHGYDIYYYANRKETLTDAQKNEIKTWFDE EEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHCC NKEDLPDNKYKGMLKGKNVIALQVESLENFVIGKKVYGQEITPNINKLLKNSLYFDNIKE CCCCCCCCHHCCCCCCCCEEEEEECCHHHHHHCCHHCCCCCCCCHHHHHHHHHHHCCHHH QNNSGTSSDCDIMVNTSILPVREGTTVFGYPWAEYNTLQKILKSKGYSTVSTHPEVPGNW CCCCCCCCCCEEEEECEEEEECCCCEEEECCCHHHHHHHHHHHHCCCCEECCCCCCCCCC NWAEVHKAFKADEIWDAHQFDQSEIIGLGMSDESYLRQVGERLKSQKQPFYTFLVTLTSH CHHHHHHHHHHHHCCCHHCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCEEEEEEEEECC GPFDMPKDKQYLNLPEDLNENMLGAYFQSVRYTDEAIGEFINQLKEEGLLDNTVIMIYGD CCCCCCCCCCCCCCCHHHCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEEEECC HGGVHKFYEDKIKDAPLEGDWWKDDEKEIPFLIYNPSINGETISKEGGQIDFLPTIAYLL CCCCHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCCEECCCCCEEEHHHHHHHHH GFNRDTFDSTAMGRVLVNTNRNASILNNGEIVGNPTPEEKAHLEKSFNIADMIIQGNYFK CCCCCCCCCCCCCEEEEECCCCCEEEECCEEECCCCCHHHHHHHHCCCHHHEEEECCEEC NN CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]