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The map label for this gene is 17548147

Identifier: 17548147

GI number: 17548147

Start: 3701304

End: 3704069

Strand: Reverse

Name: 17548147

Synonym: RSc3430

Alternate gene names: NA

Gene position: 3704069-3701304 (Counterclockwise)

Preceding gene: 17548149

Following gene: 17548146

Centisome position: 99.67

GC content: 61.1

Gene sequence:

>2766_bases
ATGAGTTTCGCGGGAAATACGAACATCCCCGGCAGCGGCACTGGAGGCGCGCTGGCGGGAGGGCTCGGCAACGTCGGCAC
AATCGCTGGCATGGCGGGACAGATCGGTGCGCTGGCGGGTATGCCGGGCGCCGGGCTCATCGGCGGCGCCGCGAGTGCGA
TGCAGCTAGCCCAGACCGGCCTGTCACTGCTGGGCAAGACCCCCGAATCCATCGCCGATGTCATCAACAGTGCGACCGGT
GCGCGTGCGCTGCTGACGCAGGACTTCCGTTACATCACCATTGAAACGCCGCTGGGCGCGGACGTCCTGCTGGTGAGCGC
ATTGGTGGCAGACGAACATGTCAACCAGTTGCCCGAGATCCACCTCGACCTGCTGTCGCACCGGAACGATATTGGCTTCG
AGGAGATCGTCGGCCAGCGCGTCAAGATCATGCTTGACCCTCGGAGCCGCAACACCAGCCTCGCAAGCATCGTCGCCGGC
GCCGACCCCGGTAGCGAGCGCCGTTATTTCGACGGCTACGTGGCATCGTTCGGGCGTGTCGGCAACCCCGGCGCGGTCAC
GCGCTACGAAATGACAGTGGTGCCGTGGTTCTGGTTTCTGACCCGCTCAACCGATTGCCGGATTTTCCAGAACCAGAGTG
CGCAGGACATTCTTGGGTCGATTTTCCAGGAGCTCGGATTTTCCGATTTCGAGTTTCATCTCTGGGGCAATCATCCAACG
CTGGAGTACGTCGTCATGTACGACGAGTCGTACTACAACTTCTGCGCGCGGCTGATGGAGCAGGAGGGGCTTATCTGGAC
GGTCCGCTACGAGCAGGACAAGCATGTGCTCGTGATCGGCGACGCCAACACCATGTTCCGGCAGATCCCAAGTCTGGCTG
CCGTGCCCTATTACGCGGACAGCGCCGCGAGCGAAATGAACGGTATCGCCCGCTGGGACGAGGCGTTCCAATTCCGGGTG
GGCAAGATCACCTTCCGCGACTTCAACTACAACCAGCCCTCGTCAAGGCTGATGCACGTCGAGGAGCCGACAACCCTCCA
GCACGCCAACATCGGCGCCACGGAGCGCTATCAGTACCACTCGCTCTATGACCGGGGCGAGGACGGCCGGCGCTATGCGC
GTTACGCGATGGAGGCCGAAGAGGCTCAAGCGCGGCGCTTCAATGGTGCTGCTTTTGCCCAGGCCATGACCACCAGTGCT
CGCTTCACGCTCGTCAACCACCCGGCGTCGCGCTACAACGGCAAGGAATTCATCATTCTGGGCGTACGACACGAGGCCGT
GAACGACTACACCAGGCAGGCCGCCGAGACGCCGTATCGCAACACGTTCACGTGCCTGCCGTTCGACATCCCGTTTCGCC
CCGCGCGTCGCACACCCAAGCCTTACATGCACGGCACGCAGCCGGCCATCGTGGTTGGGCCGAAAGGCGAGGAGATCTAC
ACCGACGGCAGTCGCGTCAAGCTTCACTTTCTGTGGGATCGGCGCGGCAGGCTCGACGGCTCGGATTCGATGTGGGTGCG
CGTGTCGCAGCCCTGGGCGGGCAAAGGTTGGGGCGGCTCCGCGATTCCGCGGATCGGGCAGGAGGTGGTCGTCGCCTTCA
ACCAAGGCGATCCCGATAACCCGATTGTGGTGGGGCGCGTCTTCAACGGTGAATCGGGCAACCCGTATCACGGGTCAAGC
GGCCAGACCATGGGGATTCGCAGCCAGACGCACAAAGGCACGGGTTTCAACGAACTGCGGTTCTCGGATGTCAATGGCGC
CGAGGAGGTGTTCGTCCACGCGCAGAAGGACATGAACACCGTCATCAAGGACAACGAGACACGTTCGATCGAAGCCGGCA
ATCGCGCGATCACGGTTCACAAGGGAGACGAGGTCAAGCGTGTCGCGCAGGGCAACCTGACGGAAACCATCGCCAAGGCT
CGTGGCACGACAGCCAATACGGTCAGCGTCCAGGCGCTTGCCGGTGACGCGGGGCCCGGCAAGCAAAGCTATCAGGCGAC
CGACGAGATCGAGCATCGCGTGGGCGAGAGCGTGGTGACGCTAAAGCCGGACAGCATTCGGCTGACGCATGGGGCGTCGA
CCATCCTGATCAATGCCAGCGGCATCTATATTGACGGGCCGGTCATTCATCTGAATCAAGGTACGGCTGCGGCGCCTGCC
GCTGCGGGAACTGGCGCCACAGCGACTGCTGCGACTGCTGCCAGTGCGGTGAAAACTGGGCTTGGCGACGACGTTGACGC
ACTCGTCGCCCAATCCCCCAGCTTGCAGAAAGATTTGCTGCGGCTTGAGAAGGATGACTGGAAAATCAAGTATGGTGCCC
CGGGAAAGGGCTCTTTTGCCACTCGTGGGGACGAGCAGACCATCACGCTCGACGGCAACCTCAAAGGCAACGCACTTGCT
ACAACACAGACCCTGGCACACGAGGTCGGGCACGCAACGTACGCGTTCAAACCGGATTACTCGTCGAAGGCTGCATATGT
CAATGGCACACTGGCAGACGAGGGCGCAGCAACCATGAATAACGTCAAGATTCAACGCGAAATCCTTGCCAAGGGTGGGC
AGGATATCGGTATCGCTGGGAATAGTGCCAATCATGCTGCCTACAACAAGGCATATGATCAATTCTTGAAGGATGGCAAC
GCCGAGGCCGCTCGGCAGGCAATAGGAGCCCAATTCGGCAAAGGGGAAATCACGTCCAACACACATCAACCTTATGCCGA
TTATTACGGAAGCACATATGACAAATCGTTCCCGCCCAAGAAGTAG

Upstream 100 bases:

>100_bases
TGATATAGTGGCATGCTCCGCACGGCAGCGGAAATATCGGTTCGGCATATTGCTGCATTTCCAGTGGGCGCCTGCCCGAC
ATCGGACTGGGTGAGTGATT

Downstream 100 bases:

>100_bases
TTTGCGAAGTCTGATTTCAATTCTCGGTTTAGCCATCTGGCTTGCTGGGTGTGGTCAGGCAGATAAGCAAAAACTACAGG
ATTCGCACATGACTCGATCG

Product: VGR-related protein

Products: NA

Alternate protein names: Type VI Secretion System Vgr Family Protein; VgrG Protein; Rhs-Family Protein; Rhs Family Protein; Rhs Element Vgr Family Protein; Vgr-Related Protein; Rhs Accessory Genetic Element; RHS Accessory Genetic Element; Vgr Protein; VgrG Family T6SS G; Two Component LuxR Family Transcriptional Regulator; Conserved Hypothethical Protein; Rhs Element Vgr Family; VGR-Related Type VI Secretion System Protein; Rhs Element Vgr ProteinGp5-Like; Type VI Secretion System VgrG Family Protein; Rhs Element Vgr Protein Subfamily; Type VI Secretion System Effector Protein VgrS; VrgG Protein; Rhs Protein; Fimbrial Operon Related Protein; Vgr Family Type VI Secretion System; VGR-Related Protein

Number of amino acids: Translated: 921; Mature: 920

Protein sequence:

>921_residues
MSFAGNTNIPGSGTGGALAGGLGNVGTIAGMAGQIGALAGMPGAGLIGGAASAMQLAQTGLSLLGKTPESIADVINSATG
ARALLTQDFRYITIETPLGADVLLVSALVADEHVNQLPEIHLDLLSHRNDIGFEEIVGQRVKIMLDPRSRNTSLASIVAG
ADPGSERRYFDGYVASFGRVGNPGAVTRYEMTVVPWFWFLTRSTDCRIFQNQSAQDILGSIFQELGFSDFEFHLWGNHPT
LEYVVMYDESYYNFCARLMEQEGLIWTVRYEQDKHVLVIGDANTMFRQIPSLAAVPYYADSAASEMNGIARWDEAFQFRV
GKITFRDFNYNQPSSRLMHVEEPTTLQHANIGATERYQYHSLYDRGEDGRRYARYAMEAEEAQARRFNGAAFAQAMTTSA
RFTLVNHPASRYNGKEFIILGVRHEAVNDYTRQAAETPYRNTFTCLPFDIPFRPARRTPKPYMHGTQPAIVVGPKGEEIY
TDGSRVKLHFLWDRRGRLDGSDSMWVRVSQPWAGKGWGGSAIPRIGQEVVVAFNQGDPDNPIVVGRVFNGESGNPYHGSS
GQTMGIRSQTHKGTGFNELRFSDVNGAEEVFVHAQKDMNTVIKDNETRSIEAGNRAITVHKGDEVKRVAQGNLTETIAKA
RGTTANTVSVQALAGDAGPGKQSYQATDEIEHRVGESVVTLKPDSIRLTHGASTILINASGIYIDGPVIHLNQGTAAAPA
AAGTGATATAATAASAVKTGLGDDVDALVAQSPSLQKDLLRLEKDDWKIKYGAPGKGSFATRGDEQTITLDGNLKGNALA
TTQTLAHEVGHATYAFKPDYSSKAAYVNGTLADEGAATMNNVKIQREILAKGGQDIGIAGNSANHAAYNKAYDQFLKDGN
AEAARQAIGAQFGKGEITSNTHQPYADYYGSTYDKSFPPKK

Sequences:

>Translated_921_residues
MSFAGNTNIPGSGTGGALAGGLGNVGTIAGMAGQIGALAGMPGAGLIGGAASAMQLAQTGLSLLGKTPESIADVINSATG
ARALLTQDFRYITIETPLGADVLLVSALVADEHVNQLPEIHLDLLSHRNDIGFEEIVGQRVKIMLDPRSRNTSLASIVAG
ADPGSERRYFDGYVASFGRVGNPGAVTRYEMTVVPWFWFLTRSTDCRIFQNQSAQDILGSIFQELGFSDFEFHLWGNHPT
LEYVVMYDESYYNFCARLMEQEGLIWTVRYEQDKHVLVIGDANTMFRQIPSLAAVPYYADSAASEMNGIARWDEAFQFRV
GKITFRDFNYNQPSSRLMHVEEPTTLQHANIGATERYQYHSLYDRGEDGRRYARYAMEAEEAQARRFNGAAFAQAMTTSA
RFTLVNHPASRYNGKEFIILGVRHEAVNDYTRQAAETPYRNTFTCLPFDIPFRPARRTPKPYMHGTQPAIVVGPKGEEIY
TDGSRVKLHFLWDRRGRLDGSDSMWVRVSQPWAGKGWGGSAIPRIGQEVVVAFNQGDPDNPIVVGRVFNGESGNPYHGSS
GQTMGIRSQTHKGTGFNELRFSDVNGAEEVFVHAQKDMNTVIKDNETRSIEAGNRAITVHKGDEVKRVAQGNLTETIAKA
RGTTANTVSVQALAGDAGPGKQSYQATDEIEHRVGESVVTLKPDSIRLTHGASTILINASGIYIDGPVIHLNQGTAAAPA
AAGTGATATAATAASAVKTGLGDDVDALVAQSPSLQKDLLRLEKDDWKIKYGAPGKGSFATRGDEQTITLDGNLKGNALA
TTQTLAHEVGHATYAFKPDYSSKAAYVNGTLADEGAATMNNVKIQREILAKGGQDIGIAGNSANHAAYNKAYDQFLKDGN
AEAARQAIGAQFGKGEITSNTHQPYADYYGSTYDKSFPPKK
>Mature_920_residues
SFAGNTNIPGSGTGGALAGGLGNVGTIAGMAGQIGALAGMPGAGLIGGAASAMQLAQTGLSLLGKTPESIADVINSATGA
RALLTQDFRYITIETPLGADVLLVSALVADEHVNQLPEIHLDLLSHRNDIGFEEIVGQRVKIMLDPRSRNTSLASIVAGA
DPGSERRYFDGYVASFGRVGNPGAVTRYEMTVVPWFWFLTRSTDCRIFQNQSAQDILGSIFQELGFSDFEFHLWGNHPTL
EYVVMYDESYYNFCARLMEQEGLIWTVRYEQDKHVLVIGDANTMFRQIPSLAAVPYYADSAASEMNGIARWDEAFQFRVG
KITFRDFNYNQPSSRLMHVEEPTTLQHANIGATERYQYHSLYDRGEDGRRYARYAMEAEEAQARRFNGAAFAQAMTTSAR
FTLVNHPASRYNGKEFIILGVRHEAVNDYTRQAAETPYRNTFTCLPFDIPFRPARRTPKPYMHGTQPAIVVGPKGEEIYT
DGSRVKLHFLWDRRGRLDGSDSMWVRVSQPWAGKGWGGSAIPRIGQEVVVAFNQGDPDNPIVVGRVFNGESGNPYHGSSG
QTMGIRSQTHKGTGFNELRFSDVNGAEEVFVHAQKDMNTVIKDNETRSIEAGNRAITVHKGDEVKRVAQGNLTETIAKAR
GTTANTVSVQALAGDAGPGKQSYQATDEIEHRVGESVVTLKPDSIRLTHGASTILINASGIYIDGPVIHLNQGTAAAPAA
AGTGATATAATAASAVKTGLGDDVDALVAQSPSLQKDLLRLEKDDWKIKYGAPGKGSFATRGDEQTITLDGNLKGNALAT
TQTLAHEVGHATYAFKPDYSSKAAYVNGTLADEGAATMNNVKIQREILAKGGQDIGIAGNSANHAAYNKAYDQFLKDGNA
EAARQAIGAQFGKGEITSNTHQPYADYYGSTYDKSFPPKK

Specific function: Unknown

COG id: COG3501

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 99618; Mature: 99487

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFAGNTNIPGSGTGGALAGGLGNVGTIAGMAGQIGALAGMPGAGLIGGAASAMQLAQTG
CCCCCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
LSLLGKTPESIADVINSATGARALLTQDFRYITIETPLGADVLLVSALVADEHVNQLPEI
HHHHCCCHHHHHHHHHCCCCCHHHEECCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHH
HLDLLSHRNDIGFEEIVGQRVKIMLDPRSRNTSLASIVAGADPGSERRYFDGYVASFGRV
HHHHHHCCCCCCHHHHCCCEEEEEECCCCCCCCEEEEEECCCCCCCCCCHHHHHHHCCCC
GNPGAVTRYEMTVVPWFWFLTRSTDCRIFQNQSAQDILGSIFQELGFSDFEFHLWGNHPT
CCCCCEEEEEEEEEEEEEEEECCCCCEEECCCCHHHHHHHHHHHCCCCCEEEEEECCCCC
LEYVVMYDESYYNFCARLMEQEGLIWTVRYEQDKHVLVIGDANTMFRQIPSLAAVPYYAD
EEEEEEECCHHHHHHHHHHHCCCCEEEEEECCCCEEEEEECCHHHHHHCCCHHCCCCCCC
SAASEMNGIARWDEAFQFRVGKITFRDFNYNQPSSRLMHVEEPTTLQHANIGATERYQYH
CHHHHHCCHHHHHHHHEEEEEEEEEEECCCCCCHHHEEEECCCCEEEECCCCCCCCEEHH
SLYDRGEDGRRYARYAMEAEEAQARRFNGAAFAQAMTTSARFTLVNHPASRYNGKEFIIL
HHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCEEEEEEECCHHHCCCCEEEEE
GVRHEAVNDYTRQAAETPYRNTFTCLPFDIPFRPARRTPKPYMHGTQPAIVVGPKGEEIY
EECHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEECCCCCEEE
TDGSRVKLHFLWDRRGRLDGSDSMWVRVSQPWAGKGWGGSAIPRIGQEVVVAFNQGDPDN
ECCCEEEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCHHCCCCEEEEEECCCCCCC
PIVVGRVFNGESGNPYHGSSGQTMGIRSQTHKGTGFNELRFSDVNGAEEVFVHAQKDMNT
CEEEEEEEECCCCCCCCCCCCCEECCCCCCCCCCCCCCEEEECCCCHHHEEEECHHHHHH
VIKDNETRSIEAGNRAITVHKGDEVKRVAQGNLTETIAKARGTTANTVSVQALAGDAGPG
HHCCCCCCEEECCCEEEEEECCCHHHHHHCCCHHHHHHHHCCCCCCEEEEEEEECCCCCC
KQSYQATDEIEHRVGESVVTLKPDSIRLTHGASTILINASGIYIDGPVIHLNQGTAAAPA
CCCCCHHHHHHHHCCCEEEEECCCCEEEECCCEEEEEECCCEEECCCEEEECCCCCCCCC
AAGTGATATAATAASAVKTGLGDDVDALVAQSPSLQKDLLRLEKDDWKIKYGAPGKGSFA
CCCCCCCHHHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHCCCCEEEEECCCCCCCCC
TRGDEQTITLDGNLKGNALATTQTLAHEVGHATYAFKPDYSSKAAYVNGTLADEGAATMN
CCCCCEEEEECCCCCCCEEEHHHHHHHHHCCCEEEECCCCCCCEEEEECEECCCCCCHHH
NVKIQREILAKGGQDIGIAGNSANHAAYNKAYDQFLKDGNAEAARQAIGAQFGKGEITSN
HHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCC
THQPYADYYGSTYDKSFPPKK
CCCCHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
SFAGNTNIPGSGTGGALAGGLGNVGTIAGMAGQIGALAGMPGAGLIGGAASAMQLAQTG
CCCCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
LSLLGKTPESIADVINSATGARALLTQDFRYITIETPLGADVLLVSALVADEHVNQLPEI
HHHHCCCHHHHHHHHHCCCCCHHHEECCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHH
HLDLLSHRNDIGFEEIVGQRVKIMLDPRSRNTSLASIVAGADPGSERRYFDGYVASFGRV
HHHHHHCCCCCCHHHHCCCEEEEEECCCCCCCCEEEEEECCCCCCCCCCHHHHHHHCCCC
GNPGAVTRYEMTVVPWFWFLTRSTDCRIFQNQSAQDILGSIFQELGFSDFEFHLWGNHPT
CCCCCEEEEEEEEEEEEEEEECCCCCEEECCCCHHHHHHHHHHHCCCCCEEEEEECCCCC
LEYVVMYDESYYNFCARLMEQEGLIWTVRYEQDKHVLVIGDANTMFRQIPSLAAVPYYAD
EEEEEEECCHHHHHHHHHHHCCCCEEEEEECCCCEEEEEECCHHHHHHCCCHHCCCCCCC
SAASEMNGIARWDEAFQFRVGKITFRDFNYNQPSSRLMHVEEPTTLQHANIGATERYQYH
CHHHHHCCHHHHHHHHEEEEEEEEEEECCCCCCHHHEEEECCCCEEEECCCCCCCCEEHH
SLYDRGEDGRRYARYAMEAEEAQARRFNGAAFAQAMTTSARFTLVNHPASRYNGKEFIIL
HHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCEEEEEEECCHHHCCCCEEEEE
GVRHEAVNDYTRQAAETPYRNTFTCLPFDIPFRPARRTPKPYMHGTQPAIVVGPKGEEIY
EECHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEECCCCCEEE
TDGSRVKLHFLWDRRGRLDGSDSMWVRVSQPWAGKGWGGSAIPRIGQEVVVAFNQGDPDN
ECCCEEEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCHHCCCCEEEEEECCCCCCC
PIVVGRVFNGESGNPYHGSSGQTMGIRSQTHKGTGFNELRFSDVNGAEEVFVHAQKDMNT
CEEEEEEEECCCCCCCCCCCCCEECCCCCCCCCCCCCCEEEECCCCHHHEEEECHHHHHH
VIKDNETRSIEAGNRAITVHKGDEVKRVAQGNLTETIAKARGTTANTVSVQALAGDAGPG
HHCCCCCCEEECCCEEEEEECCCHHHHHHCCCHHHHHHHHCCCCCCEEEEEEEECCCCCC
KQSYQATDEIEHRVGESVVTLKPDSIRLTHGASTILINASGIYIDGPVIHLNQGTAAAPA
CCCCCHHHHHHHHCCCEEEEECCCCEEEECCCEEEEEECCCEEECCCEEEECCCCCCCCC
AAGTGATATAATAASAVKTGLGDDVDALVAQSPSLQKDLLRLEKDDWKIKYGAPGKGSFA
CCCCCCCHHHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHCCCCEEEEECCCCCCCCC
TRGDEQTITLDGNLKGNALATTQTLAHEVGHATYAFKPDYSSKAAYVNGTLADEGAATMN
CCCCCEEEEECCCCCCCEEEHHHHHHHHHCCCEEEECCCCCCCEEEEECEECCCCCCHHH
NVKIQREILAKGGQDIGIAGNSANHAAYNKAYDQFLKDGNAEAARQAIGAQFGKGEITSN
HHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCC
THQPYADYYGSTYDKSFPPKK
CCCCHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA