| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
Click here to switch to the map view.
The map label for this gene is 17548141
Identifier: 17548141
GI number: 17548141
Start: 3697625
End: 3697774
Strand: Reverse
Name: 17548141
Synonym: RSc3424
Alternate gene names: NA
Gene position: 3697774-3697625 (Counterclockwise)
Preceding gene: 17548142
Following gene: 17548140
Centisome position: 99.5
GC content: 56.0
Gene sequence:
>150_bases ATGGCATATCCCGATTTCGCCAAACTGGACGACCTAGCACTTGCGGACTCCGCCCTTGACAAAAAACTTGGCTTCGCTCG AGCGAAGGCGAAAGCGATCGTGGCGCTGGCAAACAGGGCACTGAAACGGGGCCATGAGCCCATGATCTAA
Upstream 100 bases:
>100_bases TACGTACTCAATCACTGAAAATGGCCGTAGATGGCTTGAGGGCCGCGCATGAATGGTTGGGACCAACGAGATGTGACGGA GTGGATGCCCTGAAGCAGTG
Downstream 100 bases:
>100_bases CATGGGCGCCGGAGCAAAGCTATGGCTTTTTATATAAAGATTGAGAAATATGAAGAAACCGAACTTTGTGCAAAGTACAA ATTTTGGAGCGTTGACGGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 49; Mature: 48
Protein sequence:
>49_residues MAYPDFAKLDDLALADSALDKKLGFARAKAKAIVALANRALKRGHEPMI
Sequences:
>Translated_49_residues MAYPDFAKLDDLALADSALDKKLGFARAKAKAIVALANRALKRGHEPMI >Mature_48_residues AYPDFAKLDDLALADSALDKKLGFARAKAKAIVALANRALKRGHEPMI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5297; Mature: 5166
Theoretical pI: Translated: 10.28; Mature: 10.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYPDFAKLDDLALADSALDKKLGFARAKAKAIVALANRALKRGHEPMI CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure AYPDFAKLDDLALADSALDKKLGFARAKAKAIVALANRALKRGHEPMI CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA