Click here to switch to the map view.

The map label for this gene is tISRso5

Identifier: 17548110

GI number: 17548110

Start: 3659384

End: 3660475

Strand: Reverse

Name: tISRso5

Synonym: RSc3393

Alternate gene names: NA

Gene position: 3660475-3659384 (Counterclockwise)

Preceding gene: 17548111

Following gene: 17548108

Centisome position: 98.49

GC content: 61.26

Gene sequence:

>1092_bases
ATGCCAATGGGACGGCCGAAGGCGGAACTGGTGCTGAGCGAGGACGAGCAGACGCAACTGGCTGGGATGGTGCGTTCGCG
CAGTATCCCGGCGGCGTTGGTGATGCGTGCGCGCCTTGTCTTGGCGGCGGCCGCAGGCGAGCCCAACAGTGAGATCGCCG
AGCGCCTGCAGCTCACGCGCGCTACGGTGGGCAAATGGCGCGCCCGGTTCCTTGAGCGGCGCATCAATGGGTTGTACGAC
GAACTGCGACCCGGCAAGCCGCGTACCATCGACGACGAGCGCGTGGCCGAACTCATCAAGACGACGCTGCATACGAAGCC
TGCGGATGGCTCGACTCACTGGAGTGTGCGCGCGGTGGCGGCCGAGACATCGATCTCGCCTACCAGCGTGCACCGCTATT
TCAAGCTGTTGGGGCTGCAACCGCATCGCAGCGAGACCTTCAAGCTGTCCACCGATGCGTTTTTCATCGAGAAGCTGCGC
GACGTGGTGGGGCTGTATCTGAACCCGCCCGAGAATGCATTGGTGCTGTGCGTGGACGAGAAGAGCCAGTGCCAGGCACT
GGAGCGCACTCAGCCGATGCTGCCCATGGGGCTGGGCTATGTCGAAGGCGTCACCCACGACTATGTCCGCCATGGCACAA
CGACGCTGTTTGCCGCGCTGAACGTACTCAACGGCGCGGTACTGGCCGAGTGTAAGCCGCGCCATCGGCACCAAGAGTTC
CTCGCCTTCTTGCGCTCGATCGACAAAGCCGTGCCCGCCGACCTCGATGTGCATTGCATCGTGGATAACTACAGCAGCCA
TAAGCATCCCAAGGTCAAGGCGTGGCTGGCGGCCCGTCCGCGCTGGCATATGCACTTCATCCCGACCTACAGCTCTTGGC
TCAATCAGGTCGAACGCTTCTTCGCGATCATTACCGACAAGGCCATTCGCCGTGGCTCGTTCACGTCGGTTAAGGAACTG
GTTCAGAAGATCGATCACTTCGTCGCTCACTACAACCAGAACTGCAAACCATTCGCTTGGACCGCGACCGCTGATTCAAT
CCTCTCCAAGCTCAGCAGACTTTGCGAACGAATTAGCGGAACGGGACACTAG

Upstream 100 bases:

>100_bases
AGATCACGGCGCGCGCCGTCGCGGCCTAGTGTCCTGTTCCGTTGTTAACTGGTCTAAGTTTACATAGGATGTTGGCATCA
ACGAAACGGGAGATGCCAGC

Downstream 100 bases:

>100_bases
CCCATGCCGATCGCCTCAGCCTGCCTCTGCCTTCTTCGGTTCGCTCTGCGGCTCGCCCGCGCGCCGCAGCCACACCGTCA
CCACCAGCCCGACGCCGCCC

Product: ISRSO5-transposase

Products: NA

Alternate protein names: Integrase Catalytic Region; ISRSO5-Transposase Protein; Feruloyl Esterase; ISMsm2 Transposase; Isrso5-Transposase Protein; ISMsm5 Transposase; Integrase Catalytic Subunit; LuxR Family Transcriptional Regulator; LOW QUALITY PROTEIN Transposase; Aminoglycoside Phosphotransferase; LOW QUALITY PROTEIN ISMsm5 Transposase; ISPsy1 Transposase; Transposase-Fragment; Inactivated Transposase; Transposase Or Inactivated Derivative; Regulatory Protein LuxR; ISPsy25 Transposase; ISBmu8 Transposase; Transposase Of; Transposase Fragment

Number of amino acids: Translated: 363; Mature: 362

Protein sequence:

>363_residues
MPMGRPKAELVLSEDEQTQLAGMVRSRSIPAALVMRARLVLAAAAGEPNSEIAERLQLTRATVGKWRARFLERRINGLYD
ELRPGKPRTIDDERVAELIKTTLHTKPADGSTHWSVRAVAAETSISPTSVHRYFKLLGLQPHRSETFKLSTDAFFIEKLR
DVVGLYLNPPENALVLCVDEKSQCQALERTQPMLPMGLGYVEGVTHDYVRHGTTTLFAALNVLNGAVLAECKPRHRHQEF
LAFLRSIDKAVPADLDVHCIVDNYSSHKHPKVKAWLAARPRWHMHFIPTYSSWLNQVERFFAIITDKAIRRGSFTSVKEL
VQKIDHFVAHYNQNCKPFAWTATADSILSKLSRLCERISGTGH

Sequences:

>Translated_363_residues
MPMGRPKAELVLSEDEQTQLAGMVRSRSIPAALVMRARLVLAAAAGEPNSEIAERLQLTRATVGKWRARFLERRINGLYD
ELRPGKPRTIDDERVAELIKTTLHTKPADGSTHWSVRAVAAETSISPTSVHRYFKLLGLQPHRSETFKLSTDAFFIEKLR
DVVGLYLNPPENALVLCVDEKSQCQALERTQPMLPMGLGYVEGVTHDYVRHGTTTLFAALNVLNGAVLAECKPRHRHQEF
LAFLRSIDKAVPADLDVHCIVDNYSSHKHPKVKAWLAARPRWHMHFIPTYSSWLNQVERFFAIITDKAIRRGSFTSVKEL
VQKIDHFVAHYNQNCKPFAWTATADSILSKLSRLCERISGTGH
>Mature_362_residues
PMGRPKAELVLSEDEQTQLAGMVRSRSIPAALVMRARLVLAAAAGEPNSEIAERLQLTRATVGKWRARFLERRINGLYDE
LRPGKPRTIDDERVAELIKTTLHTKPADGSTHWSVRAVAAETSISPTSVHRYFKLLGLQPHRSETFKLSTDAFFIEKLRD
VVGLYLNPPENALVLCVDEKSQCQALERTQPMLPMGLGYVEGVTHDYVRHGTTTLFAALNVLNGAVLAECKPRHRHQEFL
AFLRSIDKAVPADLDVHCIVDNYSSHKHPKVKAWLAARPRWHMHFIPTYSSWLNQVERFFAIITDKAIRRGSFTSVKELV
QKIDHFVAHYNQNCKPFAWTATADSILSKLSRLCERISGTGH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40977; Mature: 40845

Theoretical pI: Translated: 9.79; Mature: 9.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPMGRPKAELVLSEDEQTQLAGMVRSRSIPAALVMRARLVLAAAAGEPNSEIAERLQLTR
CCCCCCCHHEEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
ATVGKWRARFLERRINGLYDELRPGKPRTIDDERVAELIKTTLHTKPADGSTHWSVRAVA
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEE
AETSISPTSVHRYFKLLGLQPHRSETFKLSTDAFFIEKLRDVVGLYLNPPENALVLCVDE
CCCCCCHHHHHHHHHHHCCCCCCCCCEEECHHHHHHHHHHHHHCEEECCCCCEEEEEECC
KSQCQALERTQPMLPMGLGYVEGVTHDYVRHGTTTLFAALNVLNGAVLAECKPRHRHQEF
HHHHHHHHHCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHH
LAFLRSIDKAVPADLDVHCIVDNYSSHKHPKVKAWLAARPRWHMHFIPTYSSWLNQVERF
HHHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHEECCCCEEEEECCCHHHHHHHHHHH
FAIITDKAIRRGSFTSVKELVQKIDHFVAHYNQNCKPFAWTATADSILSKLSRLCERISG
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHHCC
TGH
CCC
>Mature Secondary Structure 
PMGRPKAELVLSEDEQTQLAGMVRSRSIPAALVMRARLVLAAAAGEPNSEIAERLQLTR
CCCCCCHHEEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
ATVGKWRARFLERRINGLYDELRPGKPRTIDDERVAELIKTTLHTKPADGSTHWSVRAVA
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEE
AETSISPTSVHRYFKLLGLQPHRSETFKLSTDAFFIEKLRDVVGLYLNPPENALVLCVDE
CCCCCCHHHHHHHHHHHCCCCCCCCCEEECHHHHHHHHHHHHHCEEECCCCCEEEEEECC
KSQCQALERTQPMLPMGLGYVEGVTHDYVRHGTTTLFAALNVLNGAVLAECKPRHRHQEF
HHHHHHHHHCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHH
LAFLRSIDKAVPADLDVHCIVDNYSSHKHPKVKAWLAARPRWHMHFIPTYSSWLNQVERF
HHHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHEECCCCEEEEECCCHHHHHHHHHHH
FAIITDKAIRRGSFTSVKELVQKIDHFVAHYNQNCKPFAWTATADSILSKLSRLCERISG
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHHCC
TGH
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA