| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is tauC [C]
Identifier: 17548088
GI number: 17548088
Start: 3630697
End: 3632457
Strand: Direct
Name: tauC [C]
Synonym: RSc3371
Alternate gene names: 17548088
Gene position: 3630697-3632457 (Clockwise)
Preceding gene: 17548085
Following gene: 17548089
Centisome position: 97.69
GC content: 67.46
Gene sequence:
>1761_bases ATGCAGCAACACGACAACGAAACGACCATCCGGGGACCCTTCGGCGTCAGCTTCGGCAATCTGCTGACCGCGCCGCCCAA CCGCTTCGATCTGGCGCTGCTGCCGATCATCCTGGCGGCCATCGTGCTGGTGGCCTACGCGGCCCGGCAGATGAACGTGC CCTACACCCCGGGCGAGCCGCTGAGCGTGAGCCTGGACGTGGCCCAGCTCCCGTACTACCTGCTGCGCACCAGCATCCGC ATGCTGCTGGCGCTGGGTGCTTCGCTGCTGTTCTCGTTCGCCTTTGCCGCCATCGCCTCCAGGAACCGCACCGCCGAGAA GGTGATGGTCCCGGCGCTGGATATCCTGCAGTCCATCCCCGTGCTGGGCTTTCTGTCGATCACGGTCACGGGCTTCATTG CCCTGTTCCCCGGCAGCCTGGTGGGCGTGGAGTGCGCGGCGATCTTCGCGATCTTCACCTCGCAGGCGTGGAACATGGCG TTCTCGCTGTACCAGTCGTTCCGCACCATTCCGACCGACCTGGAAGAGGCGGCCACGGTGTTCCGCCTGTCCAAGTGGCA GCGCTTCTGGCGCCTGGAGGTGCCGTTCGCCATGCCGGGCCTGCTGTGGAACATGATGATGTCGATGTCGGGCGGCTGGT TCTTCGTGGTGGCGTCCGAGGCGATCTCGGTGTCGGGCCATGACATCAAGCTGCCGGGCATCGGCTCGTACATCTCGCTG GCGATCCAGCAGCAGAACCTGCACGCCATCGGCTGGGCCATCGTCGCCATGCTGATCGGCATCCTGCTGTACGACCAGTT GCTGTTCCGCCCGCTGATTGCCTGGGCAGACCGCTTCCGCTTCGATGCCATGTCGTCCGAGCGCGAGCCGCAGTCCTGGC TGCTGGACCTGCTGCGCCGCTCGGAGTGGGTCAAGTCGCTGCTCGAGCGCACCGCCGCGCTGGCCGAGCGCACGCTGGCC TGGGGCGCCGAGCGCACGCGGCCCAAGGCCTCCTCCGGCGGCAATAGCTTCGTGCGCCTGCCGTGGGCGGGGCGCGTGGC CGACCTCATCATTCTGTTGGCGGCCCTGGCGGCGGTCTGGCATATCCTGCAGTTCGTACGCTCGGAGGTGGGCTGGGGCG AGGTCGGCCGCGTGGTCTGGCTGGGCGTGCTGACCATGACGCGCGTGCTGGTGCTGATCGCGCTGGCCGCGCTGATCTGG GTGCCGATCGGCATCCGCATCGGCCTGAACCCGAACGTGGCGCGCATCGCGCAGCCGGTGGCCCAGTTCCTGGCGGCCTT CCCGGCCAACCTGATGTTCCCGCTGGTGGTGATGCTGATCGCGCGCTTCTCGCTCAACCCCGAGATCTGGCTGTCGCCGC TGATGATTTTCGGGACGCAGTGGTACATCCTGTTCAATGTGATTGCCGGCGCGTCGAGCATCCCGGTCGAGCTGCGGCTG GCCGCGCGCAACTTCGGCCTGCGCGGCTGGCTGAAGTGGAAGCGCTTCCTGGTGCCGGCGGTGTTCCCCAGCCTGCTGAC CGGCCTGGTGACGGCCGCGGGCGGCTCCTGGAACGCCAGCATCGTCTCCGAATACGTGTCGTGGGGCGACCGCACGCTGG TTGCCACCGGCCTCGGCAGCTACATCGCCGAGATGACCGCCAAGGGCGACTTCCCGCGCATCGCCCTGGGCATCGGCGTG ATGAGCCTGTTCGTGGTCGGCTTCAACCGGCTGCTGTGGAACCGGCTGTACGAAGTGGCGCAAGAGCGCACCCGCCTGTA A
Upstream 100 bases:
>100_bases AGGCGGCTTGCCGCCGGGTGCCAAGCGGCCGCTTGCGGGCGCCGCCCCGTCCCACCCGAGTCCAGCGCTTTCCGTCCGCG ATTCCGTCCCGGTTCTCACA
Downstream 100 bases:
>100_bases GACGAAAGACGACTTTTGTAGAGAACTGACCATGGGCACCAACGGCGAAGCCGTCATCGAACTGCGCGGCGTCTCGAAAA TCTTCCGCACGGCGGACCGC
Product: transmembrane ABC transporter protein
Products: taurine [Cytoplasm]; ADP; phosphate [C]
Alternate protein names: ABC Transporter Permease; ABC Transporter Membrane Protein; ABC Transporter Nitrate Permease; ABC Transporter; ABC Anion Transporter; ABC-Type Anion Transport System Permease Component; Anion Transporter Permease Protein; Nitrate ABC Transporter Permease; ABC Transporter Inner Membrane Subunit; ABC Transporter Transmembrane Permease Protein; ABC-Type Anion Transport System; ABC-Type Nitrate Transport Permease; ABC Transport System Permease Protein; Transmembrane ABC Transporter Protein; Nitrate Transport System Permease Protein; Nitrate ABC Transporter Permease Protein; Anion ABC Transporter Permease; Taurine ABC Transporter Permease Protein; Sugar ABC Transporter; Sugar ABC Transporter 1 Permease Protein; Sulfonate Transport Permease Protein; Nitrate Transport System Permease
Number of amino acids: Translated: 586; Mature: 586
Protein sequence:
>586_residues MQQHDNETTIRGPFGVSFGNLLTAPPNRFDLALLPIILAAIVLVAYAARQMNVPYTPGEPLSVSLDVAQLPYYLLRTSIR MLLALGASLLFSFAFAAIASRNRTAEKVMVPALDILQSIPVLGFLSITVTGFIALFPGSLVGVECAAIFAIFTSQAWNMA FSLYQSFRTIPTDLEEAATVFRLSKWQRFWRLEVPFAMPGLLWNMMMSMSGGWFFVVASEAISVSGHDIKLPGIGSYISL AIQQQNLHAIGWAIVAMLIGILLYDQLLFRPLIAWADRFRFDAMSSEREPQSWLLDLLRRSEWVKSLLERTAALAERTLA WGAERTRPKASSGGNSFVRLPWAGRVADLIILLAALAAVWHILQFVRSEVGWGEVGRVVWLGVLTMTRVLVLIALAALIW VPIGIRIGLNPNVARIAQPVAQFLAAFPANLMFPLVVMLIARFSLNPEIWLSPLMIFGTQWYILFNVIAGASSIPVELRL AARNFGLRGWLKWKRFLVPAVFPSLLTGLVTAAGGSWNASIVSEYVSWGDRTLVATGLGSYIAEMTAKGDFPRIALGIGV MSLFVVGFNRLLWNRLYEVAQERTRL
Sequences:
>Translated_586_residues MQQHDNETTIRGPFGVSFGNLLTAPPNRFDLALLPIILAAIVLVAYAARQMNVPYTPGEPLSVSLDVAQLPYYLLRTSIR MLLALGASLLFSFAFAAIASRNRTAEKVMVPALDILQSIPVLGFLSITVTGFIALFPGSLVGVECAAIFAIFTSQAWNMA FSLYQSFRTIPTDLEEAATVFRLSKWQRFWRLEVPFAMPGLLWNMMMSMSGGWFFVVASEAISVSGHDIKLPGIGSYISL AIQQQNLHAIGWAIVAMLIGILLYDQLLFRPLIAWADRFRFDAMSSEREPQSWLLDLLRRSEWVKSLLERTAALAERTLA WGAERTRPKASSGGNSFVRLPWAGRVADLIILLAALAAVWHILQFVRSEVGWGEVGRVVWLGVLTMTRVLVLIALAALIW VPIGIRIGLNPNVARIAQPVAQFLAAFPANLMFPLVVMLIARFSLNPEIWLSPLMIFGTQWYILFNVIAGASSIPVELRL AARNFGLRGWLKWKRFLVPAVFPSLLTGLVTAAGGSWNASIVSEYVSWGDRTLVATGLGSYIAEMTAKGDFPRIALGIGV MSLFVVGFNRLLWNRLYEVAQERTRL >Mature_586_residues MQQHDNETTIRGPFGVSFGNLLTAPPNRFDLALLPIILAAIVLVAYAARQMNVPYTPGEPLSVSLDVAQLPYYLLRTSIR MLLALGASLLFSFAFAAIASRNRTAEKVMVPALDILQSIPVLGFLSITVTGFIALFPGSLVGVECAAIFAIFTSQAWNMA FSLYQSFRTIPTDLEEAATVFRLSKWQRFWRLEVPFAMPGLLWNMMMSMSGGWFFVVASEAISVSGHDIKLPGIGSYISL AIQQQNLHAIGWAIVAMLIGILLYDQLLFRPLIAWADRFRFDAMSSEREPQSWLLDLLRRSEWVKSLLERTAALAERTLA WGAERTRPKASSGGNSFVRLPWAGRVADLIILLAALAAVWHILQFVRSEVGWGEVGRVVWLGVLTMTRVLVLIALAALIW VPIGIRIGLNPNVARIAQPVAQFLAAFPANLMFPLVVMLIARFSLNPEIWLSPLMIFGTQWYILFNVIAGASSIPVELRL AARNFGLRGWLKWKRFLVPAVFPSLLTGLVTAAGGSWNASIVSEYVSWGDRTLVATGLGSYIAEMTAKGDFPRIALGIGV MSLFVVGFNRLLWNRLYEVAQERTRL
Specific function: Part Of A Binding-Protein-Dependent Transport System For Taurine. Probably Responsible For The Translocation Of The Substrate Across The Membrane. [C]
COG id: COG4986
COG function: function code P; ABC-type anion transport system, duplicated permease component
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 64846; Mature: 64846
Theoretical pI: Translated: 10.41; Mature: 10.41
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQQHDNETTIRGPFGVSFGNLLTAPPNRFDLALLPIILAAIVLVAYAARQMNVPYTPGEP CCCCCCCCEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC LSVSLDVAQLPYYLLRTSIRMLLALGASLLFSFAFAAIASRNRTAEKVMVPALDILQSIP CEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCC VLGFLSITVTGFIALFPGSLVGVECAAIFAIFTSQAWNMAFSLYQSFRTIPTDLEEAATV HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH FRLSKWQRFWRLEVPFAMPGLLWNMMMSMSGGWFFVVASEAISVSGHDIKLPGIGSYISL HHHHHHHHHHEEECCHHHHHHHHHHHHHCCCCEEEEEECCCEEECCCEEECCCCCHHHHH AIQQQNLHAIGWAIVAMLIGILLYDQLLFRPLIAWADRFRFDAMSSEREPQSWLLDLLRR HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH SEWVKSLLERTAALAERTLAWGAERTRPKASSGGNSFVRLPWAGRVADLIILLAALAAVW HHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHH HILQFVRSEVGWGEVGRVVWLGVLTMTRVLVLIALAALIWVPIGIRIGLNPNVARIAQPV HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCHHHHHHHH AQFLAAFPANLMFPLVVMLIARFSLNPEIWLSPLMIFGTQWYILFNVIAGASSIPVELRL HHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCEEEEE AARNFGLRGWLKWKRFLVPAVFPSLLTGLVTAAGGSWNASIVSEYVSWGDRTLVATGLGS EHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEHHHHHH YIAEMTAKGDFPRIALGIGVMSLFVVGFNRLLWNRLYEVAQERTRL HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MQQHDNETTIRGPFGVSFGNLLTAPPNRFDLALLPIILAAIVLVAYAARQMNVPYTPGEP CCCCCCCCEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC LSVSLDVAQLPYYLLRTSIRMLLALGASLLFSFAFAAIASRNRTAEKVMVPALDILQSIP CEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCC VLGFLSITVTGFIALFPGSLVGVECAAIFAIFTSQAWNMAFSLYQSFRTIPTDLEEAATV HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH FRLSKWQRFWRLEVPFAMPGLLWNMMMSMSGGWFFVVASEAISVSGHDIKLPGIGSYISL HHHHHHHHHHEEECCHHHHHHHHHHHHHCCCCEEEEEECCCEEECCCEEECCCCCHHHHH AIQQQNLHAIGWAIVAMLIGILLYDQLLFRPLIAWADRFRFDAMSSEREPQSWLLDLLRR HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH SEWVKSLLERTAALAERTLAWGAERTRPKASSGGNSFVRLPWAGRVADLIILLAALAAVW HHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHH HILQFVRSEVGWGEVGRVVWLGVLTMTRVLVLIALAALIWVPIGIRIGLNPNVARIAQPV HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCHHHHHHHH AQFLAAFPANLMFPLVVMLIARFSLNPEIWLSPLMIFGTQWYILFNVIAGASSIPVELRL HHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCEEEEE AARNFGLRGWLKWKRFLVPAVFPSLLTGLVTAAGGSWNASIVSEYVSWGDRTLVATGLGS EHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEHHHHHH YIAEMTAKGDFPRIALGIGVMSLFVVGFNRLLWNRLYEVAQERTRL HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: taurine [Periplasm]; ATP; H2O [C]
Specific reaction: taurine [Periplasm] + ATP + H2O = taurine [Cytoplasm] + ADP + phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA