Click here to switch to the map view.

The map label for this gene is 17548046

Identifier: 17548046

GI number: 17548046

Start: 3592071

End: 3593219

Strand: Reverse

Name: 17548046

Synonym: RSc3329

Alternate gene names: NA

Gene position: 3593219-3592071 (Counterclockwise)

Preceding gene: 17548047

Following gene: 17548045

Centisome position: 96.69

GC content: 65.71

Gene sequence:

>1149_bases
ATGAAGGTTTCGCGCGCAACCCGCATCGCACTGGCCGCGACGGCATTCCTGGCAAGCACGGCGTTCGCCCAGGTGAAGGT
CGGCGTCACGGTGTCGGCCACCGGGCCGGGGGCATCGCTGGGGATTCCGGAGAAGAACACGGTGTCGCTGCTGCCCAAGG
AGATCGCCGGCAAGAAGATCGAATACATCGTGCTGGACGATGCCTCCGACACCACCACTGCCGTCAAGAACACGCGCAAG
CTGATCACCGAAGACAAGGTCGATCTCGTGATCGGCTCCACCATCACGCCGACCTCGCTGGCGATGGTGGACGTGGCGGC
CGAGAGCGAGACGCCGATGATCTCGCTGGCGGCGTCCGCGCGCATCGTCGAGCCGATGGACGCCAAGCGCGTGTGGGTCT
TCAAGACCCCGCAGAACGATTCGCACATGGCGACCGCTATTGCCGAGCACATGGCCAACCATGGCGTGAAGACGGTCGCA
CTGATCGGCTTTGCCGATGCCTACGGCGACTCGTGGGCACAGGAGTTCGACAAGGTGGCGACGTTGCGCAAGCTGCAGCT
CGTCGCCAACGAGCGCTTCGCGCGCACCGATACCTCGGTGACGGGGCAGGTGCTGAAGATCATGGCCGCCAAGCCGGACG
CGGTGCTGATCGCCGGCTCCGGCACGCCGGCCGCGTTGCCCCAGCGTGCGCTCAAGGAGCGCGGCTATAAGGGCAAGCTG
TACCAGACCCACGGCGTGGCCAATGCCGACTTCCTGCGCGTGTGCGCCAAGGACTGCGAAGGCACCTTCCTGCCCGCCGG
CCCGATCCTCGTCGCCGAGCAGCTGCCCGACAGCAACCCGGTCAAGAAGCCGGCGCTGGCCTACAAGGTCGCGTACGAGA
AAGCGTTCGGCGGCCAGGTCTCGACGTTTGGCGGCCACATGTGGGATGCCGGTCTGCTGCTGGCGAACGCGATGCCCGCG
GCGCTCAAGAAAGGGCAGCCCGGTACGCTGGCCTTCCGCAAGGGCCTGCGTGACGCGCTGGAGACGACGACCAATCTGGC
CATCTCGCATGGCGTGATGAACATGAATGCCAAGGATCACCTCGGCCTCGACCAGCGGTCGCGCGTGATGGTGGAGATCC
AGGACGGCAAGTGGAAGCTGCAGAACTGA

Upstream 100 bases:

>100_bases
CCCGCCCGGGGTGACTCCCCCTAGACTCCTCGGACTCCCGACCCCTCGGTCGGTCAATCCAATGCGGCGCAGTTTCCGCC
CGCACACTGCAGGAGAAGGC

Downstream 100 bases:

>100_bases
CGTAGCCTCGGCTGCTGTTCCACACGAAAAACGCACGGTTCGCGCCGTGCGTTTTTCTTGGTGTGGACGTTTCACGTGAA
ACATCCACGCGACAGCGGGG

Product: amino-acid-binding periplasmic (PBP) ABC transporter protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 382; Mature: 382

Protein sequence:

>382_residues
MKVSRATRIALAATAFLASTAFAQVKVGVTVSATGPGASLGIPEKNTVSLLPKEIAGKKIEYIVLDDASDTTTAVKNTRK
LITEDKVDLVIGSTITPTSLAMVDVAAESETPMISLAASARIVEPMDAKRVWVFKTPQNDSHMATAIAEHMANHGVKTVA
LIGFADAYGDSWAQEFDKVATLRKLQLVANERFARTDTSVTGQVLKIMAAKPDAVLIAGSGTPAALPQRALKERGYKGKL
YQTHGVANADFLRVCAKDCEGTFLPAGPILVAEQLPDSNPVKKPALAYKVAYEKAFGGQVSTFGGHMWDAGLLLANAMPA
ALKKGQPGTLAFRKGLRDALETTTNLAISHGVMNMNAKDHLGLDQRSRVMVEIQDGKWKLQN

Sequences:

>Translated_382_residues
MKVSRATRIALAATAFLASTAFAQVKVGVTVSATGPGASLGIPEKNTVSLLPKEIAGKKIEYIVLDDASDTTTAVKNTRK
LITEDKVDLVIGSTITPTSLAMVDVAAESETPMISLAASARIVEPMDAKRVWVFKTPQNDSHMATAIAEHMANHGVKTVA
LIGFADAYGDSWAQEFDKVATLRKLQLVANERFARTDTSVTGQVLKIMAAKPDAVLIAGSGTPAALPQRALKERGYKGKL
YQTHGVANADFLRVCAKDCEGTFLPAGPILVAEQLPDSNPVKKPALAYKVAYEKAFGGQVSTFGGHMWDAGLLLANAMPA
ALKKGQPGTLAFRKGLRDALETTTNLAISHGVMNMNAKDHLGLDQRSRVMVEIQDGKWKLQN
>Mature_382_residues
MKVSRATRIALAATAFLASTAFAQVKVGVTVSATGPGASLGIPEKNTVSLLPKEIAGKKIEYIVLDDASDTTTAVKNTRK
LITEDKVDLVIGSTITPTSLAMVDVAAESETPMISLAASARIVEPMDAKRVWVFKTPQNDSHMATAIAEHMANHGVKTVA
LIGFADAYGDSWAQEFDKVATLRKLQLVANERFARTDTSVTGQVLKIMAAKPDAVLIAGSGTPAALPQRALKERGYKGKL
YQTHGVANADFLRVCAKDCEGTFLPAGPILVAEQLPDSNPVKKPALAYKVAYEKAFGGQVSTFGGHMWDAGLLLANAMPA
ALKKGQPGTLAFRKGLRDALETTTNLAISHGVMNMNAKDHLGLDQRSRVMVEIQDGKWKLQN

Specific function: Component of an amino-acid transport system (Potential) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the leucine-binding protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001828
- InterPro:   IPR000709 [H]

Pfam domain/function: PF01094 ANF_receptor [H]

EC number: NA

Molecular weight: Translated: 40681; Mature: 40681

Theoretical pI: Translated: 9.84; Mature: 9.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVSRATRIALAATAFLASTAFAQVKVGVTVSATGPGASLGIPEKNTVSLLPKEIAGKKI
CCCCHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCCCCCCCCCCCCHHEECCHHHCCCEE
EYIVLDDASDTTTAVKNTRKLITEDKVDLVIGSTITPTSLAMVDVAAESETPMISLAASA
EEEEEECCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEEEECCCCCCEEEEECCC
RIVEPMDAKRVWVFKTPQNDSHMATAIAEHMANHGVKTVALIGFADAYGDSWAQEFDKVA
EEECCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEEEEHHHHCCHHHHHHHHHH
TLRKLQLVANERFARTDTSVTGQVLKIMAAKPDAVLIAGSGTPAALPQRALKERGYKGKL
HHHHHHHHHCCHHHCCCCHHHHHHHHHEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCE
YQTHGVANADFLRVCAKDCEGTFLPAGPILVAEQLPDSNPVKKPALAYKVAYEKAFGGQV
EEECCCCCHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCE
STFGGHMWDAGLLLANAMPAALKKGQPGTLAFRKGLRDALETTTNLAISHGVMNMNAKDH
ECCCCCHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHEEECCEEECCCHHC
LGLDQRSRVMVEIQDGKWKLQN
CCCCCCCEEEEEEECCEEEECC
>Mature Secondary Structure
MKVSRATRIALAATAFLASTAFAQVKVGVTVSATGPGASLGIPEKNTVSLLPKEIAGKKI
CCCCHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCCCCCCCCCCCCHHEECCHHHCCCEE
EYIVLDDASDTTTAVKNTRKLITEDKVDLVIGSTITPTSLAMVDVAAESETPMISLAASA
EEEEEECCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEEEECCCCCCEEEEECCC
RIVEPMDAKRVWVFKTPQNDSHMATAIAEHMANHGVKTVALIGFADAYGDSWAQEFDKVA
EEECCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEEEEHHHHCCHHHHHHHHHH
TLRKLQLVANERFARTDTSVTGQVLKIMAAKPDAVLIAGSGTPAALPQRALKERGYKGKL
HHHHHHHHHCCHHHCCCCHHHHHHHHHEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCE
YQTHGVANADFLRVCAKDCEGTFLPAGPILVAEQLPDSNPVKKPALAYKVAYEKAFGGQV
EEECCCCCHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCE
STFGGHMWDAGLLLANAMPAALKKGQPGTLAFRKGLRDALETTTNLAISHGVMNMNAKDH
ECCCCCHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHEEECCEEECCCHHC
LGLDQRSRVMVEIQDGKWKLQN
CCCCCCCEEEEEEECCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11756688 [H]