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The map label for this gene is rsmI [H]

Identifier: 17547983

GI number: 17547983

Start: 3518172

End: 3519074

Strand: Direct

Name: rsmI [H]

Synonym: RSc3266

Alternate gene names: 17547983

Gene position: 3518172-3519074 (Clockwise)

Preceding gene: 17547967

Following gene: 17547985

Centisome position: 94.67

GC content: 73.98

Gene sequence:

>903_bases
GTGAGTGATCCTGACTGGACCCTGCTGGCGCATGACCAGCACTATCCCGCCGGCGCATTATATGTGGTGGCCACCCCCAT
CGGGAACGCCGCCGACGTGTCGCTGCGCGCGCGGCACGTGCTCGGCCTGGCCGATGCGGTGGCCTGCGAAGACACGCGCA
ACACCGGCCAGTTGCTGCATCGCCTGGGCCTGTCGCGGCCGCTGCTGGCGGCGCACGAGCACAACGAGCGCGAGGCGGCC
GCCCGCATCGTGGAGCGCCTGGCGCGCGGCGAGCGCATCGCCTACGTATCGGACGCCGGCACGCCGGGCGTGTCGGACCC
GGGCGCGCGCATTGTCGAGGCCGTGCGCGCGGCCGGGCAGCGCGTGATTCCGCTGCCGGGCGCGAGCGCGGTGGTGACGG
CGCTGTCTGCGGCGGGCGCGCTGCTGGAGACCTCCGCCGGCCAGTTCACCTTCGTCGGGTTTCTACCGCCCAAGGCGGGC
CAGCGCGATACGGCCATCCGCCAGTGGGCCGCGCACGGGCCGGCCTGGGTCCTGTACGAGGCGCCGCATCGCATCGACGC
CACGCTGGCGGCGCTGGCGGCGCACCTGCCCGCGCGGCGCCTGCTGATCGGCCGCGAACTGACCAAGCTGTTCGAGCAGA
TCGTCGTGCTGCCGGCCGCCGAGGCGCCCGCCTGGCTGGCCGCCGACGCCTCGCATGGCAAGGGGGAGTTTGTATTGGTG
GTGGAAGGCGCGGGCGCGCAGGAGGCGGCGCCCACCGCGCTGGCCGCGGACCAGGTGCTGCGCCTGCTGCTGGCCGAGCT
GCCGGCCAAGCGCGCAGCCAAGCTGGCCGGGGCGATCACCGGCGCGCCGGTCGACGCGTTGTACCAGAGCGCGCTGGCGC
TGAAAAACGACGGACGGGATTAG

Upstream 100 bases:

>100_bases
TCTTCGGCGGCCTCGCCCGTCGCGGCGGCGCCGGGCGGCGAAGGCGCGGGCTGCGGCGCGTGCATCTGCGGTTTGAATCG
ACTGACCAAGAGAAGTTCTC

Downstream 100 bases:

>100_bases
CGGCGCGCGCGGGCCCGGCGCTTGACCGCCTTCTTGCGCGGCGGCGCGGGTTCGTCGGCGCCCATGTCGGCGTCGCCGCT
GTTGCTGGCGACGTCGGTCT

Product: hypothetical protein

Products: NA

Alternate protein names: 16S rRNA 2'-O-ribose C1402 methyltransferase; rRNA (cytidine-2'-O-)-methyltransferase RsmI [H]

Number of amino acids: Translated: 300; Mature: 299

Protein sequence:

>300_residues
MSDPDWTLLAHDQHYPAGALYVVATPIGNAADVSLRARHVLGLADAVACEDTRNTGQLLHRLGLSRPLLAAHEHNEREAA
ARIVERLARGERIAYVSDAGTPGVSDPGARIVEAVRAAGQRVIPLPGASAVVTALSAAGALLETSAGQFTFVGFLPPKAG
QRDTAIRQWAAHGPAWVLYEAPHRIDATLAALAAHLPARRLLIGRELTKLFEQIVVLPAAEAPAWLAADASHGKGEFVLV
VEGAGAQEAAPTALAADQVLRLLLAELPAKRAAKLAGAITGAPVDALYQSALALKNDGRD

Sequences:

>Translated_300_residues
MSDPDWTLLAHDQHYPAGALYVVATPIGNAADVSLRARHVLGLADAVACEDTRNTGQLLHRLGLSRPLLAAHEHNEREAA
ARIVERLARGERIAYVSDAGTPGVSDPGARIVEAVRAAGQRVIPLPGASAVVTALSAAGALLETSAGQFTFVGFLPPKAG
QRDTAIRQWAAHGPAWVLYEAPHRIDATLAALAAHLPARRLLIGRELTKLFEQIVVLPAAEAPAWLAADASHGKGEFVLV
VEGAGAQEAAPTALAADQVLRLLLAELPAKRAAKLAGAITGAPVDALYQSALALKNDGRD
>Mature_299_residues
SDPDWTLLAHDQHYPAGALYVVATPIGNAADVSLRARHVLGLADAVACEDTRNTGQLLHRLGLSRPLLAAHEHNEREAAA
RIVERLARGERIAYVSDAGTPGVSDPGARIVEAVRAAGQRVIPLPGASAVVTALSAAGALLETSAGQFTFVGFLPPKAGQ
RDTAIRQWAAHGPAWVLYEAPHRIDATLAALAAHLPARRLLIGRELTKLFEQIVVLPAAEAPAWLAADASHGKGEFVLVV
EGAGAQEAAPTALAADQVLRLLLAELPAKRAAKLAGAITGAPVDALYQSALALKNDGRD

Specific function: Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA [H]

COG id: COG0313

COG function: function code R; Predicted methyltransferases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmI family [H]

Homologues:

Organism=Escherichia coli, GI1789535, Length=278, Percent_Identity=45.6834532374101, Blast_Score=204, Evalue=8e-54,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000878
- InterPro:   IPR014777
- InterPro:   IPR008189
- InterPro:   IPR018063 [H]

Pfam domain/function: PF00590 TP_methylase [H]

EC number: NA

Molecular weight: Translated: 31304; Mature: 31173

Theoretical pI: Translated: 6.87; Mature: 6.87

Prosite motif: PS01296 UPF0011

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDPDWTLLAHDQHYPAGALYVVATPIGNAADVSLRARHVLGLADAVACEDTRNTGQLLH
CCCCCEEEEECCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHH
RLGLSRPLLAAHEHNEREAAARIVERLARGERIAYVSDAGTPGVSDPGARIVEAVRAAGQ
HHCCCCCCHHHHCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCC
RVIPLPGASAVVTALSAAGALLETSAGQFTFVGFLPPKAGQRDTAIRQWAAHGPAWVLYE
EEEECCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHCCCCEEEEEE
APHRIDATLAALAAHLPARRLLIGRELTKLFEQIVVLPAAEAPAWLAADASHGKGEFVLV
CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHEECCCCCCCEEEECCCCCCCCEEEE
VEGAGAQEAAPTALAADQVLRLLLAELPAKRAAKLAGAITGAPVDALYQSALALKNDGRD
EECCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SDPDWTLLAHDQHYPAGALYVVATPIGNAADVSLRARHVLGLADAVACEDTRNTGQLLH
CCCCEEEEECCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHH
RLGLSRPLLAAHEHNEREAAARIVERLARGERIAYVSDAGTPGVSDPGARIVEAVRAAGQ
HHCCCCCCHHHHCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCC
RVIPLPGASAVVTALSAAGALLETSAGQFTFVGFLPPKAGQRDTAIRQWAAHGPAWVLYE
EEEECCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHCCCCEEEEEE
APHRIDATLAALAAHLPARRLLIGRELTKLFEQIVVLPAAEAPAWLAADASHGKGEFVLV
CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHEECCCCCCCEEEECCCCCCCCEEEE
VEGAGAQEAAPTALAADQVLRLLLAELPAKRAAKLAGAITGAPVDALYQSALALKNDGRD
EECCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10761919 [H]