| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is 17547957
Identifier: 17547957
GI number: 17547957
Start: 3494944
End: 3495207
Strand: Reverse
Name: 17547957
Synonym: RSc3238
Alternate gene names: NA
Gene position: 3495207-3494944 (Counterclockwise)
Preceding gene: 17547960
Following gene: 17547956
Centisome position: 94.05
GC content: 64.39
Gene sequence:
>264_bases ATGGCAATTCTTTCCTCACCTGTTCAATTGGGTCGCCACACCCGCCGGCACGAAGCACCGGCCGCTGTGCGTGCCGCGCT GGACGAGACCGAGCTCGCCAAGCGCTGGGGGCTGTCGGTCAAGACATTGCAGCGCTGGCGCCAGGACCACATGGGCCCCG TCTTCTGCAAGCTCGGCTCCCGCGTCACCTACCTGATCTCCGAAATCGAAGCCTTCGAGCGGCGCGTCTCGCGCAATTCG ACGTCGGTTCGTGCGTACCACTGA
Upstream 100 bases:
>100_bases GAGTCCGATCTGGGAACTCGTCAAAACCCAAATTTCGCTCGCCCAAGCCCAAGGCGTCGGGCAATGAAATAGAGCCTCTT TCAACAAGAGGACTCTCTTC
Downstream 100 bases:
>100_bases GGAGGCAGCCATGACGAATCTGATCCCGCTGCCGGCCGACATCGCCAGCATGTCCGTGAGCGAACTGGCAAAACTCTCGC CTGAGCGCAAGCACGAGCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 87; Mature: 86
Protein sequence:
>87_residues MAILSSPVQLGRHTRRHEAPAAVRAALDETELAKRWGLSVKTLQRWRQDHMGPVFCKLGSRVTYLISEIEAFERRVSRNS TSVRAYH
Sequences:
>Translated_87_residues MAILSSPVQLGRHTRRHEAPAAVRAALDETELAKRWGLSVKTLQRWRQDHMGPVFCKLGSRVTYLISEIEAFERRVSRNS TSVRAYH >Mature_86_residues AILSSPVQLGRHTRRHEAPAAVRAALDETELAKRWGLSVKTLQRWRQDHMGPVFCKLGSRVTYLISEIEAFERRVSRNST SVRAYH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9988; Mature: 9856
Theoretical pI: Translated: 11.34; Mature: 11.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAILSSPVQLGRHTRRHEAPAAVRAALDETELAKRWGLSVKTLQRWRQDHMGPVFCKLGS CCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHCC RVTYLISEIEAFERRVSRNSTSVRAYH HHHHHHHHHHHHHHHHHCCCCCEECCC >Mature Secondary Structure AILSSPVQLGRHTRRHEAPAAVRAALDETELAKRWGLSVKTLQRWRQDHMGPVFCKLGS CCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHCC RVTYLISEIEAFERRVSRNSTSVRAYH HHHHHHHHHHHHHHHHHCCCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA