| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is dltE [H]
Identifier: 17547919
GI number: 17547919
Start: 3461695
End: 3461916
Strand: Direct
Name: dltE [H]
Synonym: RSc3200
Alternate gene names: 17547919
Gene position: 3461695-3461916 (Clockwise)
Preceding gene: 17547918
Following gene: 17547920
Centisome position: 93.15
GC content: 58.56
Gene sequence:
>222_bases ATGAAACTCACAGCCAATACAATCCTCATCACTGGCGGCGCGACCGGCATTGGCCTCGCACTTGCCAAACGACTCTCCGA AGAAAATCAGGTGATCGTCTGCGGCCGCAACGAGGTCGCTCTCCAGAAGGCGAAGGATGAAGTGCCGGCGCTAGTGACGC GCGTCTGCGACGTCGCCGACACGCTCAGCCGCCGCGAAATGGTTGAATGGTTGAATGGTTGA
Upstream 100 bases:
>100_bases CGCGACACCCAGCCCGGCTTGCCGGTAGCGAAGGTGTGTCCGTGATTACCCCATTTCATCGTCGGCGCGCCTTCTTCTTG AAATAGAAGGACGTACGACC
Downstream 100 bases:
>100_bases ATGGTTGAATGGTTGAATGGTTGAATGGCTGAAGGCGGAGCACCCTGCCCTCAATATGGTCATCAACAATGCCGGCATTC AGGCACAGCACGACTTCACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 73; Mature: 73
Protein sequence:
>73_residues MKLTANTILITGGATGIGLALAKRLSEENQVIVCGRNEVALQKAKDEVPALVTRVCDVADTLSRREMVEWLNG
Sequences:
>Translated_73_residues MKLTANTILITGGATGIGLALAKRLSEENQVIVCGRNEVALQKAKDEVPALVTRVCDVADTLSRREMVEWLNG >Mature_73_residues MKLTANTILITGGATGIGLALAKRLSEENQVIVCGRNEVALQKAKDEVPALVTRVCDVADTLSRREMVEWLNG
Specific function: Unknown
COG id: COG3967
COG function: function code M; Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: NA
Molecular weight: Translated: 7852; Mature: 7852
Theoretical pI: Translated: 6.54; Mature: 6.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLTANTILITGGATGIGLALAKRLSEENQVIVCGRNEVALQKAKDEVPALVTRVCDVAD CCCCCCEEEEECCCCHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHH TLSRREMVEWLNG HHHHHHHHHHHCC >Mature Secondary Structure MKLTANTILITGGATGIGLALAKRLSEENQVIVCGRNEVALQKAKDEVPALVTRVCDVAD CCCCCCEEEEECCCCHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHH TLSRREMVEWLNG HHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7934828; 9384377; 7797557 [H]