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The map label for this gene is tISRso1

Identifier: 17547918

GI number: 17547918

Start: 3460622

End: 3461446

Strand: Direct

Name: tISRso1

Synonym: RSc3199

Alternate gene names: NA

Gene position: 3460622-3461446 (Clockwise)

Preceding gene: 17547909

Following gene: 17547919

Centisome position: 93.12

GC content: 63.03

Gene sequence:

>825_bases
ATGTGGAAAAAAGAAGATCGAGAGCGTGAGGCGAAGCTGGCTCGGAAGACCAAGCGTTACCCGAGCGACCTGACGGATAT
CGAATGGGCCGCTGTGCAGCCGCTGCTGCCACGCGCGGCCGTGCGAGGCCGGCGTCGGGAGTGCGACTTGAGGGAGGTGG
TCAACGCCTTGCGCTATCTGGTGCGAGCGGGCTGCGGTTGGCGCATGCTGCCGCACGACTTCCCGCCTTGGCAAACCGTG
TATTGGTGGTTTCGTCGGCTCATGCGCCGCTTGCTGTTCCGCACGCTGCACGACGTGGTGCTGATGTTGGACCGGGAGTT
GGCTGGGCGGCAGCCGTGCCCAAGTGCGGGCGTCATCGACAGCCAGACAGTCAAAGCGCCCTCGGCCGACAAGCGTGGCT
ATGACGCGGCCAAGAAAATCGTCGGGAGCAAGCGGCATATCGCGGTGGACACGGATGGACGGCTGCTGATGGTGAACCTG
ACACCGACGGACATTGCCGATAGCACGGGTGCGCTGGCGGTGCTGGAAGCGGTGAAGAAGCGCTGGCCAGGCATAAAACA
CCTGTTCGCTGACGGTGCGTATGACCGCACAGCGCTGATGGACAAGGCATCGACCCTCGACTTCGTGGTTGAGGTGGTGC
GCCGGCACGAGCAGCAAACGGGCTTGGCCGTTCTGCCGCGCCGCTGGGTGGTCGAGCGCACCTTTGGGTGGATGGTTCGC
TGGCGCCGACTCGTACGCGACTACGAACAGCGGGCAGACGTATCGGAAGCCATGATTCATATCGCGATGAGTGGCTTGTT
ACTGCGCAGAATCGCTCATCCTTGA

Upstream 100 bases:

>100_bases
CGTTGACGTAGCCACCGACCGATTCAACGATGCGGCCGATCACCCCTATCAGGCTCAGAGCCCGTTTGAAAATTCCCCGC
GGTTGTGATGTAAATGCGGG

Downstream 100 bases:

>100_bases
ATTTCCAAACGGGCTCTAAGAGGATTGGAATCACTGTCTCTTGTGCTCCGCCAAAAAGCTTGGTAGAAGTCGTGTGTCGA
AAGAGTGCTGACCGGATGGT

Product: transposase

Products: NA

Alternate protein names: Transposase IS4 Family Protein; IS4 Family Transposase; Transposase IS5 Family Protein; Transposase And Inactivated Derivatives-Like Protein; IS5 Family Transposase; Transposase Of; LOW QUALITY PROTEIN Transposase; IS4 Insertion Sequence Transposase Protein; Transposase-Like Protein; Transposase Fragment; Transposase And Inactivated Derivatives-Like; Transposase Protein; ISXo3 Transposase ORF B; Transposase And Inactivated Derivatives; Transposase IS5 Family Protein-Like Protein; Family Transposase; Transposase IS4 Family; Transposase Is4 Family Protein; Transposon; IS4 Family Insertion Sequence Transposase Protein; Transposase Is4 Family; IS3/IS4 Family Insertion Sequence Transposase Protein; IS Transposase; ISPsy19 Transposase; Transposase IS5 Family; Isxo3 Transposase Protein; Insertion Sequence Transposase Truncated Protein

Number of amino acids: Translated: 274; Mature: 274

Protein sequence:

>274_residues
MWKKEDREREAKLARKTKRYPSDLTDIEWAAVQPLLPRAAVRGRRRECDLREVVNALRYLVRAGCGWRMLPHDFPPWQTV
YWWFRRLMRRLLFRTLHDVVLMLDRELAGRQPCPSAGVIDSQTVKAPSADKRGYDAAKKIVGSKRHIAVDTDGRLLMVNL
TPTDIADSTGALAVLEAVKKRWPGIKHLFADGAYDRTALMDKASTLDFVVEVVRRHEQQTGLAVLPRRWVVERTFGWMVR
WRRLVRDYEQRADVSEAMIHIAMSGLLLRRIAHP

Sequences:

>Translated_274_residues
MWKKEDREREAKLARKTKRYPSDLTDIEWAAVQPLLPRAAVRGRRRECDLREVVNALRYLVRAGCGWRMLPHDFPPWQTV
YWWFRRLMRRLLFRTLHDVVLMLDRELAGRQPCPSAGVIDSQTVKAPSADKRGYDAAKKIVGSKRHIAVDTDGRLLMVNL
TPTDIADSTGALAVLEAVKKRWPGIKHLFADGAYDRTALMDKASTLDFVVEVVRRHEQQTGLAVLPRRWVVERTFGWMVR
WRRLVRDYEQRADVSEAMIHIAMSGLLLRRIAHP
>Mature_274_residues
MWKKEDREREAKLARKTKRYPSDLTDIEWAAVQPLLPRAAVRGRRRECDLREVVNALRYLVRAGCGWRMLPHDFPPWQTV
YWWFRRLMRRLLFRTLHDVVLMLDRELAGRQPCPSAGVIDSQTVKAPSADKRGYDAAKKIVGSKRHIAVDTDGRLLMVNL
TPTDIADSTGALAVLEAVKKRWPGIKHLFADGAYDRTALMDKASTLDFVVEVVRRHEQQTGLAVLPRRWVVERTFGWMVR
WRRLVRDYEQRADVSEAMIHIAMSGLLLRRIAHP

Specific function: Unknown

COG id: COG3293

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31799; Mature: 31799

Theoretical pI: Translated: 10.91; Mature: 10.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWKKEDREREAKLARKTKRYPSDLTDIEWAAVQPLLPRAAVRGRRRECDLREVVNALRYL
CCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
VRAGCGWRMLPHDFPPWQTVYWWFRRLMRRLLFRTLHDVVLMLDRELAGRQPCPSAGVID
HHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
SQTVKAPSADKRGYDAAKKIVGSKRHIAVDTDGRLLMVNLTPTDIADSTGALAVLEAVKK
CCCCCCCCCCCCCHHHHHHHHCCCCEEEEECCCCEEEEECCCCCCCCCCHHHHHHHHHHH
RWPGIKHLFADGAYDRTALMDKASTLDFVVEVVRRHEQQTGLAVLPRRWVVERTFGWMVR
HCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
WRRLVRDYEQRADVSEAMIHIAMSGLLLRRIAHP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MWKKEDREREAKLARKTKRYPSDLTDIEWAAVQPLLPRAAVRGRRRECDLREVVNALRYL
CCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
VRAGCGWRMLPHDFPPWQTVYWWFRRLMRRLLFRTLHDVVLMLDRELAGRQPCPSAGVID
HHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
SQTVKAPSADKRGYDAAKKIVGSKRHIAVDTDGRLLMVNLTPTDIADSTGALAVLEAVKK
CCCCCCCCCCCCCHHHHHHHHCCCCEEEEECCCCEEEEECCCCCCCCCCHHHHHHHHHHH
RWPGIKHLFADGAYDRTALMDKASTLDFVVEVVRRHEQQTGLAVLPRRWVVERTFGWMVR
HCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
WRRLVRDYEQRADVSEAMIHIAMSGLLLRRIAHP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA