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The map label for this gene is 17547894

Identifier: 17547894

GI number: 17547894

Start: 3434022

End: 3434690

Strand: Reverse

Name: 17547894

Synonym: RSc3175

Alternate gene names: NA

Gene position: 3434690-3434022 (Counterclockwise)

Preceding gene: 17547895

Following gene: 17547893

Centisome position: 92.42

GC content: 46.79

Gene sequence:

>669_bases
TTGAAGCGGAACACGAACTCGTCCAGGTACCCGTGTAAGTATGAGATTGGTCACCAGGATACAAATGCTGCGCTTCCTCC
AGAGGAATTTGCATCGAAGCTGAGAGCCGACGCCAACAATATTCGCGAGCAGAGCAGCAAGCGCCCCGTCAGATCCTATG
GTATTGAGCTCCCAGAGAAGGCAACCATCTCGCTCTTTGGAACTAAATTAATGATTAGCATCTATACTCTGACACAGGTC
ATGCAGATAGTGCTTTTCCCAATTTTGATACTTTGGCTTGGGATTCTATTCAATACGCGATACCGGGAGACAATACTTAT
CGGGGTTGCAGCAAAAATTTCCGATCTGTACCCGCACGTGATCAACGTTTACATGAACGCGACGCTTCCTCCATTGCGCA
AGAAAAGTTGGGCGGGGTATTATTTCAAAACCCTGATCCCGTACTTTCCAGCCTTGGTGAGAATTTTTCTTCTTTCTATT
TTCATCATGCCGCCAACCATCTTTTATTGCGCCAGTCTTTTCTACCTATCCGCCGATGAGCATGCAGCGCTCGCCGTAAT
GGCTGGTTTTCTTGTGATCATTTTTTCCATGACAAATGCGATATCTGAATTGAGTCGGTGGCACGCCGAAAAAACATTTC
CTGGCCCTAAACTCAATGCCCAACGGTAA

Upstream 100 bases:

>100_bases
GTTCGACTGAATCACATCCGCATAGGTCACGGGGGCCGTATCCACGGCCTGCTGAAGCAACCGGTAGAACAGCATGCCGC
GCGAGCCCGAGGTGCGGCGA

Downstream 100 bases:

>100_bases
GTCGGTGATCAGGCATTCGTGAGGGAATTCGTGTGCCGTCCGCTACCGCTACGTGTTATCAGGTGTTGTGGGCGGCTGAT
TTGGGTGGGCAGCTAAAATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 222; Mature: 222

Protein sequence:

>222_residues
MKRNTNSSRYPCKYEIGHQDTNAALPPEEFASKLRADANNIREQSSKRPVRSYGIELPEKATISLFGTKLMISIYTLTQV
MQIVLFPILILWLGILFNTRYRETILIGVAAKISDLYPHVINVYMNATLPPLRKKSWAGYYFKTLIPYFPALVRIFLLSI
FIMPPTIFYCASLFYLSADEHAALAVMAGFLVIIFSMTNAISELSRWHAEKTFPGPKLNAQR

Sequences:

>Translated_222_residues
MKRNTNSSRYPCKYEIGHQDTNAALPPEEFASKLRADANNIREQSSKRPVRSYGIELPEKATISLFGTKLMISIYTLTQV
MQIVLFPILILWLGILFNTRYRETILIGVAAKISDLYPHVINVYMNATLPPLRKKSWAGYYFKTLIPYFPALVRIFLLSI
FIMPPTIFYCASLFYLSADEHAALAVMAGFLVIIFSMTNAISELSRWHAEKTFPGPKLNAQR
>Mature_222_residues
MKRNTNSSRYPCKYEIGHQDTNAALPPEEFASKLRADANNIREQSSKRPVRSYGIELPEKATISLFGTKLMISIYTLTQV
MQIVLFPILILWLGILFNTRYRETILIGVAAKISDLYPHVINVYMNATLPPLRKKSWAGYYFKTLIPYFPALVRIFLLSI
FIMPPTIFYCASLFYLSADEHAALAVMAGFLVIIFSMTNAISELSRWHAEKTFPGPKLNAQR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25320; Mature: 25320

Theoretical pI: Translated: 10.01; Mature: 10.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRNTNSSRYPCKYEIGHQDTNAALPPEEFASKLRADANNIREQSSKRPVRSYGIELPEK
CCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCC
ATISLFGTKLMISIYTLTQVMQIVLFPILILWLGILFNTRYRETILIGVAAKISDLYPHV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
INVYMNATLPPLRKKSWAGYYFKTLIPYFPALVRIFLLSIFIMPPTIFYCASLFYLSADE
HHHHHCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCC
HAALAVMAGFLVIIFSMTNAISELSRWHAEKTFPGPKLNAQR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MKRNTNSSRYPCKYEIGHQDTNAALPPEEFASKLRADANNIREQSSKRPVRSYGIELPEK
CCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCC
ATISLFGTKLMISIYTLTQVMQIVLFPILILWLGILFNTRYRETILIGVAAKISDLYPHV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
INVYMNATLPPLRKKSWAGYYFKTLIPYFPALVRIFLLSIFIMPPTIFYCASLFYLSADE
HHHHHCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCC
HAALAVMAGFLVIIFSMTNAISELSRWHAEKTFPGPKLNAQR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA