| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is cysC1 [H]
Identifier: 17547885
GI number: 17547885
Start: 3425694
End: 3426272
Strand: Direct
Name: cysC1 [H]
Synonym: RSc3166
Alternate gene names: 17547885
Gene position: 3425694-3426272 (Clockwise)
Preceding gene: 17547884
Following gene: 17547887
Centisome position: 92.18
GC content: 65.98
Gene sequence:
>579_bases ATGACGCCCGCCCCTTCCACGCTGTGGCTGACGGGCCTGAGCGCAGCCGGCAAGACGACCCTCGCGCATGCGCTCGCAGA GGCGCTGACGGCCGCTGGCGCTGCCTGCCAGGTTCTTGATGGCGACGTGGTGCGCCAGGCATTGAGCCGCGACCTTGGCT TCTCCAGGGCCGACCGCAGCCAGAACATCCGGCGCGTGGCTGACCGGTGCCGGCAGCTCAATGACGCCGGGTCATGGGCC ATCGCCGCCGTGATTTCGCCCTATCGGGCGGACCGCGAACAGGCGCGCCGGACAGTCGGCGAACCCAGGTTCTTCGAAAT CCATCTGGCCACCCCGCTCACGGTATGCGAGCGGCGCGACCCGAAAGGTTTGTATCGCCGGGCCCGTGCGGGAGAGATCG CGCATTTCACCGGCATCAGCGATGCCTATGAAGTGCCGCAGCACCCCGATCTGCGGTTCGACACCGCGACACGGTCAGTG GCCGAGTGCGTGGACGCGACCATGGCATTGCTTGCGGCTGTAAGCGGCAATGTCATGACACTCAGTTCAGAATCTGTCTC GAACGCTGGATCGATCTGA
Upstream 100 bases:
>100_bases CGCACGGCGGCGACTGGAGCCGCTTGTGGCCCCGGCTGTTGGGCGTGACGCCAGTCTGCAGCGAGCCTTCCGGTGCCCAC CAGGAACCCCAGGCAAAGGA
Downstream 100 bases:
>100_bases CCCGTGTAATGTTGGATGATGCGCGGGCGACTGATGCGAGAGGCCAATGCATGAGGGAAAGCCGCACGACCAGGCGGGTG CCCGACGCGGCCGCGTTGGG
Product: adenylylsulfate kinase
Products: NA
Alternate protein names: APS kinase; ATP adenosine-5'-phosphosulfate 3'-phosphotransferase; Adenosine-5'-phosphosulfate kinase [H]
Number of amino acids: Translated: 192; Mature: 191
Protein sequence:
>192_residues MTPAPSTLWLTGLSAAGKTTLAHALAEALTAAGAACQVLDGDVVRQALSRDLGFSRADRSQNIRRVADRCRQLNDAGSWA IAAVISPYRADREQARRTVGEPRFFEIHLATPLTVCERRDPKGLYRRARAGEIAHFTGISDAYEVPQHPDLRFDTATRSV AECVDATMALLAAVSGNVMTLSSESVSNAGSI
Sequences:
>Translated_192_residues MTPAPSTLWLTGLSAAGKTTLAHALAEALTAAGAACQVLDGDVVRQALSRDLGFSRADRSQNIRRVADRCRQLNDAGSWA IAAVISPYRADREQARRTVGEPRFFEIHLATPLTVCERRDPKGLYRRARAGEIAHFTGISDAYEVPQHPDLRFDTATRSV AECVDATMALLAAVSGNVMTLSSESVSNAGSI >Mature_191_residues TPAPSTLWLTGLSAAGKTTLAHALAEALTAAGAACQVLDGDVVRQALSRDLGFSRADRSQNIRRVADRCRQLNDAGSWAI AAVISPYRADREQARRTVGEPRFFEIHLATPLTVCERRDPKGLYRRARAGEIAHFTGISDAYEVPQHPDLRFDTATRSVA ECVDATMALLAAVSGNVMTLSSESVSNAGSI
Specific function: Catalyzes the synthesis of activated sulfate [H]
COG id: COG0529
COG function: function code P; Adenylylsulfate kinase and related kinases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the APS kinase family [H]
Homologues:
Organism=Homo sapiens, GI34447231, Length=168, Percent_Identity=50.5952380952381, Blast_Score=166, Evalue=1e-41, Organism=Homo sapiens, GI62912492, Length=168, Percent_Identity=50.5952380952381, Blast_Score=166, Evalue=1e-41, Organism=Homo sapiens, GI46094058, Length=168, Percent_Identity=49.4047619047619, Blast_Score=163, Evalue=8e-41, Organism=Escherichia coli, GI1789107, Length=165, Percent_Identity=48.4848484848485, Blast_Score=163, Evalue=8e-42, Organism=Caenorhabditis elegans, GI17542422, Length=164, Percent_Identity=46.3414634146341, Blast_Score=157, Evalue=3e-39, Organism=Saccharomyces cerevisiae, GI6322852, Length=175, Percent_Identity=45.1428571428571, Blast_Score=157, Evalue=1e-39, Organism=Drosophila melanogaster, GI24667032, Length=167, Percent_Identity=46.1077844311377, Blast_Score=150, Evalue=6e-37, Organism=Drosophila melanogaster, GI24667028, Length=167, Percent_Identity=46.1077844311377, Blast_Score=150, Evalue=6e-37, Organism=Drosophila melanogaster, GI24667036, Length=167, Percent_Identity=46.1077844311377, Blast_Score=150, Evalue=6e-37, Organism=Drosophila melanogaster, GI116007838, Length=167, Percent_Identity=46.1077844311377, Blast_Score=150, Evalue=6e-37, Organism=Drosophila melanogaster, GI24667044, Length=167, Percent_Identity=46.1077844311377, Blast_Score=150, Evalue=6e-37, Organism=Drosophila melanogaster, GI24667040, Length=167, Percent_Identity=46.1077844311377, Blast_Score=150, Evalue=7e-37,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002891 [H]
Pfam domain/function: PF01583 APS_kinase [H]
EC number: =2.7.1.25 [H]
Molecular weight: Translated: 20581; Mature: 20450
Theoretical pI: Translated: 7.97; Mature: 7.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPAPSTLWLTGLSAAGKTTLAHALAEALTAAGAACQVLDGDVVRQALSRDLGFSRADRS CCCCCCCCEEECCCCCCHHHHHHHHHHHHHHCCHHHHHHCHHHHHHHHHHHCCCCHHHHH QNIRRVADRCRQLNDAGSWAIAAVISPYRADREQARRTVGEPRFFEIHLATPLTVCERRD HHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHCCCCCEEEEEECCCHHHHHCCC PKGLYRRARAGEIAHFTGISDAYEVPQHPDLRFDTATRSVAECVDATMALLAAVSGNVMT CHHHHHHHHCCCCHHHCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEE LSSESVSNAGSI ECCCCCCCCCCC >Mature Secondary Structure TPAPSTLWLTGLSAAGKTTLAHALAEALTAAGAACQVLDGDVVRQALSRDLGFSRADRS CCCCCCCEEECCCCCCHHHHHHHHHHHHHHCCHHHHHHCHHHHHHHHHHHCCCCHHHHH QNIRRVADRCRQLNDAGSWAIAAVISPYRADREQARRTVGEPRFFEIHLATPLTVCERRD HHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHCCCCCEEEEEECCCHHHHHCCC PKGLYRRARAGEIAHFTGISDAYEVPQHPDLRFDTATRSVAECVDATMALLAAVSGNVMT CHHHHHHHHCCCCHHHCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEE LSSESVSNAGSI ECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA