Click here to switch to the map view.

The map label for this gene is 17547876

Identifier: 17547876

GI number: 17547876

Start: 3411565

End: 3412401

Strand: Reverse

Name: 17547876

Synonym: RSc3157

Alternate gene names: NA

Gene position: 3412401-3411565 (Counterclockwise)

Preceding gene: 17547878

Following gene: 17547874

Centisome position: 91.82

GC content: 61.65

Gene sequence:

>837_bases
ATGTCCAATAAAACCCACGAAATCCGCCCGAACCAGTCGATCGAGTTGCTGAAGGAACTGCACATCCTGACGCGCGACGG
CAAGATGAATCAGGACAGCCGCCGCAAGCTGAAGCAGGTCTATCACCTGTTCCAGTTCATCGAGCCGCTGCTCGACGACG
TACAGAAAGCGAAGGGACATGTATCGCTTGTCGATCACGGCGCGGGCAAGTCGTACCTCGGCTTCATCCTCTACGACCTG
TTCTTCAAAGAGCAACCCGGCGACGGTGCTTCGCACATCTATGGCATCGAAACGCGCGAAGCGCTCGTGGCGAAGTCGAC
CGAGCTCGCGGCGCGGCTCGGCTTCAAGGGGATGTCGTTTCTGAACGTGTCGGTGGCGGAATCGATCACGTCGGAGCGCC
TACCGCCTGCCGTCGACGTCGTGACCGCGCTGCACGCGTGCAACACCGCCACCGACGATGCGATCCGCTTCGCGCTCGAA
AAGCATGCGCAGTACATCGTGCTCGTGCCCTGCTGCCAGGCGGAGGTCGCCGGCGTGTTGCGCCGGAACAAGGGCAAGTC
GCTCGGCAATGCGTTGACGGAAATCTGGCGTCATCCGCTGCATACGCGCGAATTCGGCAGCCAGGTCACAAACGTGCTGC
GCTGCCTGCAGCTCGAAGCCCACGGCTATCAGGTGAGCGTGACGGAGCTCGTCGGCTGGGAGCATTCGATGAAAAACGAG
CTGATCGTTGCGCAGTACAAAGACCTGCCTCGGCGGCGTCCGACTGAGCGGCTCGCTGAAGTGCTCAGCACGCTCGGCCT
CGAAGAACTGCGCGAGCGCTTCTTTGCGCCGGCGTGA

Upstream 100 bases:

>100_bases
CGTGGCCCGACACGCTTTTCGGTAAACTGACGCCATTGTTTCCGTTCTTCCCTAGGCTGCCGCACGTATCGGTACGACTT
GCCGCGAAGCGGCCTTGACG

Downstream 100 bases:

>100_bases
TGGAATCAGCCGAGCCGCCCGGTCATGCGTCGTGCGGCTCGTTGCTCCTGCCATCGCAAAACTGACGCATACGATCCCGA
AGGATGCTGCAGTCGAGTTT

Product: hypothetical protein

Products: NA

Alternate protein names: SAM-Dependent Methyltransferase; SAM Dependent Methyltransferase; Sam-Dependent Methyltransferase; Conserved Domain Protein; Sam Dependent Methyltransferase

Number of amino acids: Translated: 278; Mature: 277

Protein sequence:

>278_residues
MSNKTHEIRPNQSIELLKELHILTRDGKMNQDSRRKLKQVYHLFQFIEPLLDDVQKAKGHVSLVDHGAGKSYLGFILYDL
FFKEQPGDGASHIYGIETREALVAKSTELAARLGFKGMSFLNVSVAESITSERLPPAVDVVTALHACNTATDDAIRFALE
KHAQYIVLVPCCQAEVAGVLRRNKGKSLGNALTEIWRHPLHTREFGSQVTNVLRCLQLEAHGYQVSVTELVGWEHSMKNE
LIVAQYKDLPRRRPTERLAEVLSTLGLEELRERFFAPA

Sequences:

>Translated_278_residues
MSNKTHEIRPNQSIELLKELHILTRDGKMNQDSRRKLKQVYHLFQFIEPLLDDVQKAKGHVSLVDHGAGKSYLGFILYDL
FFKEQPGDGASHIYGIETREALVAKSTELAARLGFKGMSFLNVSVAESITSERLPPAVDVVTALHACNTATDDAIRFALE
KHAQYIVLVPCCQAEVAGVLRRNKGKSLGNALTEIWRHPLHTREFGSQVTNVLRCLQLEAHGYQVSVTELVGWEHSMKNE
LIVAQYKDLPRRRPTERLAEVLSTLGLEELRERFFAPA
>Mature_277_residues
SNKTHEIRPNQSIELLKELHILTRDGKMNQDSRRKLKQVYHLFQFIEPLLDDVQKAKGHVSLVDHGAGKSYLGFILYDLF
FKEQPGDGASHIYGIETREALVAKSTELAARLGFKGMSFLNVSVAESITSERLPPAVDVVTALHACNTATDDAIRFALEK
HAQYIVLVPCCQAEVAGVLRRNKGKSLGNALTEIWRHPLHTREFGSQVTNVLRCLQLEAHGYQVSVTELVGWEHSMKNEL
IVAQYKDLPRRRPTERLAEVLSTLGLEELRERFFAPA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31338; Mature: 31207

Theoretical pI: Translated: 8.04; Mature: 8.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNKTHEIRPNQSIELLKELHILTRDGKMNQDSRRKLKQVYHLFQFIEPLLDDVQKAKGH
CCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
VSLVDHGAGKSYLGFILYDLFFKEQPGDGASHIYGIETREALVAKSTELAARLGFKGMSF
EEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCEECCCHHHHHHHHHHHHHHHHCCCCCHH
LNVSVAESITSERLPPAVDVVTALHACNTATDDAIRFALEKHAQYIVLVPCCQAEVAGVL
HHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEEECCHHHHHHHH
RRNKGKSLGNALTEIWRHPLHTREFGSQVTNVLRCLQLEAHGYQVSVTELVGWEHSMKNE
HHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHCCHHHHHCC
LIVAQYKDLPRRRPTERLAEVLSTLGLEELRERFFAPA
EEHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHCCCC
>Mature Secondary Structure 
SNKTHEIRPNQSIELLKELHILTRDGKMNQDSRRKLKQVYHLFQFIEPLLDDVQKAKGH
CCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
VSLVDHGAGKSYLGFILYDLFFKEQPGDGASHIYGIETREALVAKSTELAARLGFKGMSF
EEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCEECCCHHHHHHHHHHHHHHHHCCCCCHH
LNVSVAESITSERLPPAVDVVTALHACNTATDDAIRFALEKHAQYIVLVPCCQAEVAGVL
HHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEEECCHHHHHHHH
RRNKGKSLGNALTEIWRHPLHTREFGSQVTNVLRCLQLEAHGYQVSVTELVGWEHSMKNE
HHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHCCHHHHHCC
LIVAQYKDLPRRRPTERLAEVLSTLGLEELRERFFAPA
EEHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA