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The map label for this gene is 17547873

Identifier: 17547873

GI number: 17547873

Start: 3407360

End: 3408196

Strand: Reverse

Name: 17547873

Synonym: RSc3154

Alternate gene names: NA

Gene position: 3408196-3407360 (Counterclockwise)

Preceding gene: 17547874

Following gene: 17547872

Centisome position: 91.71

GC content: 66.31

Gene sequence:

>837_bases
ATGTTGAAACGCGTGCTATTTGCGGTTTTTCTGCTGACGGTCAGCGTCATCGGACAGGGGGCGACCGCCGAACCCAAGGT
TGAACTCACGATCGGCGGCAAGACCCGGTCGTTTACGCAGCAGGCATTGCTGGCGCGCCCGGATGCGGCGACGATCCAGG
TGCCGCGCGATGTTGCCTACGGTACGTCGGCCACTTACCGCGCGGTGCCGCTGCCCAACCTGCTCGACGGTGCGGTGGTG
CCCGCTGACAGCGTGCTCGAAGCCCGCGCGACCGACGGCTTCGCTGCGCAGCTGCCGATGGATCTCGTGCGCAACAGCAA
CCCCGCGGGTGCCGTCGCATGGCTCGCCGTCGAGGACCCGGCGCATCCGTGGCCGAAGCTGCCGGGCAAGCCGGTCAGCG
CGGGACCGTTCTACCTGGTCTGGATCGGCAAGGACGCGGCGTCCGTGCGCAGCGAGCAATGGCCCTACCAGGTCGCGCAG
CTCACCACGCAACCGTCCCCGGCCACGCGATGGCCGGCGCTCAACGTCGATCCGGCGCTGCCGGCAACCGATCGGGTCCG
CGCGGGCCAAAGCCTGTTCATCACGCAATGTTTCGCCTGCCACACATTCAACCATGCAGGCAGCGCAACCGTCGGCCCCG
ACCTCAACATGCCGATGAATCCGACCGAGTACTTCCAGCCCGGCGTATTGCATCGCTATCTCCGCAATCCGGCCTCGGTC
CGGGACTGGCCCGCCCGGACCATGCCGGCCTTCTCGCCGGATCATCTGAGCGATCGCGAGATCGATCTGATCATCGCGTA
TCTGAAGCATATGGCGCCGCGCAAGGTCGGAAAGTAA

Upstream 100 bases:

>100_bases
CCGCGTTCTTCTGCCGGACGGCCTGACGGCGAATCTCTCCCCACTGCCGCGGCGGTCCAATCACCGCCATCGGCTCGAAC
AAAAAAATAAAGGACAACGC

Downstream 100 bases:

>100_bases
CGCGTACTGTGCGCGCTGACCGCACGGGATTGCGAAGGGCAGCGGCACATCGAGCCTGAGCCGTCCCGTCGGTACGATGA
CGTTGAACGGCTGGGTGGCC

Product: signal peptide protein

Products: NA

Alternate protein names: Cytochrome C; Cytochrome C Family Protein; Cytochrome C-Like Protein; Cytochrome; Signal Peptide Protein

Number of amino acids: Translated: 278; Mature: 278

Protein sequence:

>278_residues
MLKRVLFAVFLLTVSVIGQGATAEPKVELTIGGKTRSFTQQALLARPDAATIQVPRDVAYGTSATYRAVPLPNLLDGAVV
PADSVLEARATDGFAAQLPMDLVRNSNPAGAVAWLAVEDPAHPWPKLPGKPVSAGPFYLVWIGKDAASVRSEQWPYQVAQ
LTTQPSPATRWPALNVDPALPATDRVRAGQSLFITQCFACHTFNHAGSATVGPDLNMPMNPTEYFQPGVLHRYLRNPASV
RDWPARTMPAFSPDHLSDREIDLIIAYLKHMAPRKVGK

Sequences:

>Translated_278_residues
MLKRVLFAVFLLTVSVIGQGATAEPKVELTIGGKTRSFTQQALLARPDAATIQVPRDVAYGTSATYRAVPLPNLLDGAVV
PADSVLEARATDGFAAQLPMDLVRNSNPAGAVAWLAVEDPAHPWPKLPGKPVSAGPFYLVWIGKDAASVRSEQWPYQVAQ
LTTQPSPATRWPALNVDPALPATDRVRAGQSLFITQCFACHTFNHAGSATVGPDLNMPMNPTEYFQPGVLHRYLRNPASV
RDWPARTMPAFSPDHLSDREIDLIIAYLKHMAPRKVGK
>Mature_278_residues
MLKRVLFAVFLLTVSVIGQGATAEPKVELTIGGKTRSFTQQALLARPDAATIQVPRDVAYGTSATYRAVPLPNLLDGAVV
PADSVLEARATDGFAAQLPMDLVRNSNPAGAVAWLAVEDPAHPWPKLPGKPVSAGPFYLVWIGKDAASVRSEQWPYQVAQ
LTTQPSPATRWPALNVDPALPATDRVRAGQSLFITQCFACHTFNHAGSATVGPDLNMPMNPTEYFQPGVLHRYLRNPASV
RDWPARTMPAFSPDHLSDREIDLIIAYLKHMAPRKVGK

Specific function: Unknown

COG id: COG2010

COG function: function code C; Cytochrome c, mono- and diheme variants

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30151; Mature: 30151

Theoretical pI: Translated: 9.36; Mature: 9.36

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKRVLFAVFLLTVSVIGQGATAEPKVELTIGGKTRSFTQQALLARPDAATIQVPRDVAY
CHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHCCCCCCEEECCCHHCC
GTSATYRAVPLPNLLDGAVVPADSVLEARATDGFAAQLPMDLVRNSNPAGAVAWLAVEDP
CCCCCEEECCCCHHHCCCCCCHHHHHHHHCCCCCHHHCCHHHHHCCCCCCEEEEEEECCC
AHPWPKLPGKPVSAGPFYLVWIGKDAASVRSEQWPYQVAQLTTQPSPATRWPALNVDPAL
CCCCCCCCCCCCCCCCEEEEEECCCHHHHHCCCCCCHHHHEECCCCCCCCCCCCCCCCCC
PATDRVRAGQSLFITQCFACHTFNHAGSATVGPDLNMPMNPTEYFQPGVLHRYLRNPASV
CCHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHCCCCCC
RDWPARTMPAFSPDHLSDREIDLIIAYLKHMAPRKVGK
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCHHHCCC
>Mature Secondary Structure
MLKRVLFAVFLLTVSVIGQGATAEPKVELTIGGKTRSFTQQALLARPDAATIQVPRDVAY
CHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHCCCCCCEEECCCHHCC
GTSATYRAVPLPNLLDGAVVPADSVLEARATDGFAAQLPMDLVRNSNPAGAVAWLAVEDP
CCCCCEEECCCCHHHCCCCCCHHHHHHHHCCCCCHHHCCHHHHHCCCCCCEEEEEEECCC
AHPWPKLPGKPVSAGPFYLVWIGKDAASVRSEQWPYQVAQLTTQPSPATRWPALNVDPAL
CCCCCCCCCCCCCCCCEEEEEECCCHHHHHCCCCCCHHHHEECCCCCCCCCCCCCCCCCC
PATDRVRAGQSLFITQCFACHTFNHAGSATVGPDLNMPMNPTEYFQPGVLHRYLRNPASV
CCHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHCCCCCC
RDWPARTMPAFSPDHLSDREIDLIIAYLKHMAPRKVGK
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA