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The map label for this gene is gspH

Identifier: 17547826

GI number: 17547826

Start: 3344470

End: 3344967

Strand: Direct

Name: gspH

Synonym: RSc3107

Alternate gene names: NA

Gene position: 3344470-3344967 (Clockwise)

Preceding gene: 17547825

Following gene: 17547827

Centisome position: 89.99

GC content: 73.9

Gene sequence:

>498_bases
ATGCAGCACCGCCCCGCTCCACATCGCGCAGCCCGCGTGCGCCGCGGCTTCACGTTGCTGGAACTGCTGGTGGTGGTGGT
CATCATCGGCATCGTGCTGGGCGTGGTGGCGGTCAATGCCACGCCCAACCCGCGCTCGCAGCTGGCGGACGATGCGCAGA
AGCTGGCACGCCTGATCGAGCTGGCCCAGGAAGAGGCGCAGCTCACCGCGCGCCCGGTGGCGTGGGAAGGCGACGCGCAG
GGCTGGCGCTTTCTGGAGTCGACGCCCGGCGGCTGGCGCGTGATGACGCGCGACGTGCTGGCGCCCGGCCACTGGCGCCA
GCCGATGGACAACGTGCAGATCGTGGCCGGTGCCGCCGCCGCGCCCGGTGCGCCGCAGCGCCTGGTGTTCGGCCGCGAGG
CGATCGGGCTGCCGTGGCGCGTGGCGCTGTCGTCCCGGGGCGCGCGCATCGACGTGGTGTCCGACGGCGGCCCGCGCGTA
CTGACCGAGGCGCCATGA

Upstream 100 bases:

>100_bases
CGGCGCCGACGGCCAGCCCGGCGGCACCGCCAACGATGCCGACATCGGCAACTGGGACAATTGATCGACTGACCGGCCGA
TCCCCATTTACACATCCGTC

Downstream 100 bases:

>100_bases
GCCGAGCCAGCCGAACCCGCCGGGCCGCGCGGCGGCATGGATTCACCCTGCTCGAAGTGCTGGTCGCGCTGACCATCGTG
GCGGTCGCGCTCACCGCCAC

Product: general secretion pathway protein H

Products: NA

Alternate protein names: Type II Secretory Pathway Pseudopilin PulG

Number of amino acids: Translated: 165; Mature: 165

Protein sequence:

>165_residues
MQHRPAPHRAARVRRGFTLLELLVVVVIIGIVLGVVAVNATPNPRSQLADDAQKLARLIELAQEEAQLTARPVAWEGDAQ
GWRFLESTPGGWRVMTRDVLAPGHWRQPMDNVQIVAGAAAAPGAPQRLVFGREAIGLPWRVALSSRGARIDVVSDGGPRV
LTEAP

Sequences:

>Translated_165_residues
MQHRPAPHRAARVRRGFTLLELLVVVVIIGIVLGVVAVNATPNPRSQLADDAQKLARLIELAQEEAQLTARPVAWEGDAQ
GWRFLESTPGGWRVMTRDVLAPGHWRQPMDNVQIVAGAAAAPGAPQRLVFGREAIGLPWRVALSSRGARIDVVSDGGPRV
LTEAP
>Mature_165_residues
MQHRPAPHRAARVRRGFTLLELLVVVVIIGIVLGVVAVNATPNPRSQLADDAQKLARLIELAQEEAQLTARPVAWEGDAQ
GWRFLESTPGGWRVMTRDVLAPGHWRQPMDNVQIVAGAAAAPGAPQRLVFGREAIGLPWRVALSSRGARIDVVSDGGPRV
LTEAP

Specific function: Unknown

COG id: COG2165

COG function: function code NU; Type II secretory pathway, pseudopilin PulG

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17822; Mature: 17822

Theoretical pI: Translated: 11.63; Mature: 11.63

Prosite motif: PS00409 PROKAR_NTER_METHYL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQHRPAPHRAARVRRGFTLLELLVVVVIIGIVLGVVAVNATPNPRSQLADDAQKLARLIE
CCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
LAQEEAQLTARPVAWEGDAQGWRFLESTPGGWRVMTRDVLAPGHWRQPMDNVQIVAGAAA
HHHHHHHHHCCCCCCCCCCCCCEEECCCCCCEEEEEHHHCCCCCCCCCCCCEEEEECCCC
APGAPQRLVFGREAIGLPWRVALSSRGARIDVVSDGGPRVLTEAP
CCCCCCCEEECCHHCCCCEEEEECCCCCEEEEECCCCCEECCCCC
>Mature Secondary Structure
MQHRPAPHRAARVRRGFTLLELLVVVVIIGIVLGVVAVNATPNPRSQLADDAQKLARLIE
CCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
LAQEEAQLTARPVAWEGDAQGWRFLESTPGGWRVMTRDVLAPGHWRQPMDNVQIVAGAAA
HHHHHHHHHCCCCCCCCCCCCCEEECCCCCCEEEEEHHHCCCCCCCCCCCCEEEEECCCC
APGAPQRLVFGREAIGLPWRVALSSRGARIDVVSDGGPRVLTEAP
CCCCCCCEEECCHHCCCCEEEEECCCCCEEEEECCCCCEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA