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The map label for this gene is 17547774

Identifier: 17547774

GI number: 17547774

Start: 3292237

End: 3292650

Strand: Reverse

Name: 17547774

Synonym: RSc3055

Alternate gene names: NA

Gene position: 3292650-3292237 (Counterclockwise)

Preceding gene: 17547775

Following gene: 17547772

Centisome position: 88.6

GC content: 61.59

Gene sequence:

>414_bases
ATGCCCGCGACTGAGGCATTCTTCGACAGCAATGTCGTGCTGTACCTGCTGTCGGCCGACACCGCCAAGGCCGATGCGGC
GGAAACGCTGCTGATGACCGGCGGTGTCGTCACCGTACAGGTACTGAACGAAACGACGCACGTGATGCGCCGCAAGCTCG
CCATGCCGTGGCACGCGATCGAAACGGTGCAGGAGGCCGTGCGTGCGCAATGCCGGGTCGAGCCGCTGACGCTCGAAACC
CATGATCTCGGACGGCGTATCGCAGAACGCTACGGATTGTCGGTCTATGATGCACTGATCGTCGCGGCGGCATTGCTTGC
CGGCTGCAACGTTCTGTATTCCGAGGATATGCAGCACGGCCTGGTGATCGAGCAGCATCTGCGCATCGTCAATCCTTTTC
CGGCACGGGCATGA

Upstream 100 bases:

>100_bases
GGCGTCCGCCGCAAGCGCGCTGCGCGCGAGCTTTTCGACCGGATCCACCAATATCGCGGCAAGCTGCCCGCCGATTTCAT
CTTCGAGCGCGACCAGGCCA

Downstream 100 bases:

>100_bases
ACCGCGCCGCCATCGCCGCCCACCCCTCGGGCCCGAGCCGCTCCATCGTCGCGATATTGCGTTCATAGATGTCCGCCGCA
TTCGGCACGGCCGCCGCGGC

Product: hypothetical protein

Products: NA

Alternate protein names: PilT Protein Domain Protein; PilT Protein Domain-Containing Protein; PIN Domain Protein; PilT Protein-Like; PilT Protein-Like Protein; Pilt Protein Domain Protein; MarR Family Transcriptional Regulator; PilT-Like Protein; PilT Protein N-Terminal

Number of amino acids: Translated: 137; Mature: 136

Protein sequence:

>137_residues
MPATEAFFDSNVVLYLLSADTAKADAAETLLMTGGVVTVQVLNETTHVMRRKLAMPWHAIETVQEAVRAQCRVEPLTLET
HDLGRRIAERYGLSVYDALIVAAALLAGCNVLYSEDMQHGLVIEQHLRIVNPFPARA

Sequences:

>Translated_137_residues
MPATEAFFDSNVVLYLLSADTAKADAAETLLMTGGVVTVQVLNETTHVMRRKLAMPWHAIETVQEAVRAQCRVEPLTLET
HDLGRRIAERYGLSVYDALIVAAALLAGCNVLYSEDMQHGLVIEQHLRIVNPFPARA
>Mature_136_residues
PATEAFFDSNVVLYLLSADTAKADAAETLLMTGGVVTVQVLNETTHVMRRKLAMPWHAIETVQEAVRAQCRVEPLTLETH
DLGRRIAERYGLSVYDALIVAAALLAGCNVLYSEDMQHGLVIEQHLRIVNPFPARA

Specific function: Unknown

COG id: COG5573

COG function: function code R; Predicted nucleic-acid-binding protein, contains PIN domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15102; Mature: 14970

Theoretical pI: Translated: 5.54; Mature: 5.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPATEAFFDSNVVLYLLSADTAKADAAETLLMTGGVVTVQVLNETTHVMRRKLAMPWHAI
CCCCCHHHCCCEEEEEEECCCCCHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHCCCHHHH
ETVQEAVRAQCRVEPLTLETHDLGRRIAERYGLSVYDALIVAAALLAGCNVLYSEDMQHG
HHHHHHHHHHHCCCCEEECHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHCCCCC
LVIEQHLRIVNPFPARA
HHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
PATEAFFDSNVVLYLLSADTAKADAAETLLMTGGVVTVQVLNETTHVMRRKLAMPWHAI
CCCCHHHCCCEEEEEEECCCCCHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHCCCHHHH
ETVQEAVRAQCRVEPLTLETHDLGRRIAERYGLSVYDALIVAAALLAGCNVLYSEDMQHG
HHHHHHHHHHHCCCCEEECHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHCCCCC
LVIEQHLRIVNPFPARA
HHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA