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The map label for this gene is 17547769

Identifier: 17547769

GI number: 17547769

Start: 3287175

End: 3287456

Strand: Direct

Name: 17547769

Synonym: RSc3050

Alternate gene names: NA

Gene position: 3287175-3287456 (Clockwise)

Preceding gene: 17547768

Following gene: 17547770

Centisome position: 88.45

GC content: 67.73

Gene sequence:

>282_bases
ATGTTCAGCTGGATGGCCTGGACGCCCGAGGTGGCGATCTTCTTCGGCTGCATCGCGTTGATGCTGGCCGGCATGACGGT
CTGGGAAGTGGCGCGGCCGACCGTGGAGCGCAAGGGCTTTCTGCCGATCGCCACCACGCGCGGCGACCGCCTCTTCATCG
GCCTGCTGACGGCCGCGTACATCAACCTGGCGTGGGTCGGCCTCGCGTCGGAGGACAGCGGCGCCTGGAGCGGCTTCATC
GCTTCGATGGCGGTGCTGCTGCTGATCATGTGGCGCGGCTAG

Upstream 100 bases:

>100_bases
ACCATCATCCCCGGCGCGCTGGTGATCTGGTTTGTGCGGAACTACATCGCGAAGGGCTTCGCGATGGGCCGCGTCTAGAA
CGAGAACGGGAGACACAGCC

Downstream 100 bases:

>100_bases
CCGGCACAGGGCCGCATCGGTTTCGCAAGTCGGGAAACGCCGGCAGCATGCCGCCGCTTCCATGCCCGCATGGGCACAGG
CATTCCACCACGCTCCCCGC

Product: hypothetical protein

Products: NA

Alternate protein names: Transmembrane Protein; Small Integral Membrane Protein-Like Protein; Integral Transmembrane Protein; Small Integral Membrane Protein; Transmembrane Lipoprotein COG

Number of amino acids: Translated: 93; Mature: 93

Protein sequence:

>93_residues
MFSWMAWTPEVAIFFGCIALMLAGMTVWEVARPTVERKGFLPIATTRGDRLFIGLLTAAYINLAWVGLASEDSGAWSGFI
ASMAVLLLIMWRG

Sequences:

>Translated_93_residues
MFSWMAWTPEVAIFFGCIALMLAGMTVWEVARPTVERKGFLPIATTRGDRLFIGLLTAAYINLAWVGLASEDSGAWSGFI
ASMAVLLLIMWRG
>Mature_93_residues
MFSWMAWTPEVAIFFGCIALMLAGMTVWEVARPTVERKGFLPIATTRGDRLFIGLLTAAYINLAWVGLASEDSGAWSGFI
ASMAVLLLIMWRG

Specific function: Unknown

COG id: COG5477

COG function: function code S; Predicted small integral membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10244; Mature: 10244

Theoretical pI: Translated: 6.54; Mature: 6.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
6.5 %Met     (Translated Protein)
7.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
6.5 %Met     (Mature Protein)
7.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSWMAWTPEVAIFFGCIALMLAGMTVWEVARPTVERKGFLPIATTRGDRLFIGLLTAAY
CCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHCCCHHCCCCEEEEECCCCCHHHHHHHHHH
INLAWVGLASEDSGAWSGFIASMAVLLLIMWRG
HHHHHEECCCCCCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFSWMAWTPEVAIFFGCIALMLAGMTVWEVARPTVERKGFLPIATTRGDRLFIGLLTAAY
CCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHCCCHHCCCCEEEEECCCCCHHHHHHHHHH
INLAWVGLASEDSGAWSGFIASMAVLLLIMWRG
HHHHHEECCCCCCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA