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The map label for this gene is yfaT [H]

Identifier: 17547750

GI number: 17547750

Start: 3256364

End: 3257089

Strand: Reverse

Name: yfaT [H]

Synonym: RSc3031

Alternate gene names: 17547750

Gene position: 3257089-3256364 (Counterclockwise)

Preceding gene: 17547751

Following gene: 17547749

Centisome position: 87.64

GC content: 71.9

Gene sequence:

>726_bases
ATGAAGCCGCGCGCGCTGGCGCATGTCCCGGCGGCCGCGCCGCGCCGCCGCTGGCTGGCCGCGGCCGGTGCCGGCCTGCT
CGCGCAGGCCTTCGCGCCGGGCGTGCGGGCGCTGTCCGGCTGGGCCGACGCGGCAGCGGCGGGGCCCGGCGCGCTGACGC
CCGAGCAGTCGGGGGTGTTCCGCGCGTGGTTCGTGCGCATCGTCAACGAGCAGCTGCGGCAGGGGCCCACGCCGCGCTGG
ACGCATCGCGACTGCGCCGGCCTGGTGCGCTTTGCCGCCGCCGAGGCGCTGCGTCCGCACGATGTCCGCTGGCTGCGCGC
CAACGGCATGCGCGACGCCGAGTCGGCGCGCCAGCTGCCGCCGGAGCTCGACCTGACCCCGGCCCAGCGCACGCTCGCGC
AGCGCTGGGCACGCATCGACGGCAGCACCGGCGCCTACGTCTCCGCACTGGCGCTGATCCAGCAGAACAGCCGCTTCATC
GCCAAGGATGTCAACCAGGCACTGCCCGGCGACCTGCTGTTCTTCGATCAGGGCGACGACCAGCATCTGATGATCTGGAT
GGATCGCTACATCGCTTACCACACCGGCACCGTCACCCGCACCGACGCGGGTTTGCGGGCGGTTCCGGTTTCTGAACTGA
TGCAATGGAAAGACTCGCGCTGGCAGCCGCAGGGCGGCAATCCCAACTTCATCGGCGTGTTTCGCCTGGCCTTTTTGACG
CGATAG

Upstream 100 bases:

>100_bases
CGGGTGGCGACGGCACGCCGCCGGCCGCCGAGGCGCCGGCGGATGCGGCGCCGGCCGAAGTTGCCGCCGCGCCGGCCCCC
GCCAACAACGCCGACACGCA

Downstream 100 bases:

>100_bases
GAAAACAGATGCGCAATCGTTGGCTGTCCAATCTGGTCGCGGTGATCTGCCTTGCGGCGCTCGCGGTCGCCGTGCCCGCC
CGCGCCGACGAGGCGGCCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 241; Mature: 241

Protein sequence:

>241_residues
MKPRALAHVPAAAPRRRWLAAAGAGLLAQAFAPGVRALSGWADAAAAGPGALTPEQSGVFRAWFVRIVNEQLRQGPTPRW
THRDCAGLVRFAAAEALRPHDVRWLRANGMRDAESARQLPPELDLTPAQRTLAQRWARIDGSTGAYVSALALIQQNSRFI
AKDVNQALPGDLLFFDQGDDQHLMIWMDRYIAYHTGTVTRTDAGLRAVPVSELMQWKDSRWQPQGGNPNFIGVFRLAFLT
R

Sequences:

>Translated_241_residues
MKPRALAHVPAAAPRRRWLAAAGAGLLAQAFAPGVRALSGWADAAAAGPGALTPEQSGVFRAWFVRIVNEQLRQGPTPRW
THRDCAGLVRFAAAEALRPHDVRWLRANGMRDAESARQLPPELDLTPAQRTLAQRWARIDGSTGAYVSALALIQQNSRFI
AKDVNQALPGDLLFFDQGDDQHLMIWMDRYIAYHTGTVTRTDAGLRAVPVSELMQWKDSRWQPQGGNPNFIGVFRLAFLT
R
>Mature_241_residues
MKPRALAHVPAAAPRRRWLAAAGAGLLAQAFAPGVRALSGWADAAAAGPGALTPEQSGVFRAWFVRIVNEQLRQGPTPRW
THRDCAGLVRFAAAEALRPHDVRWLRANGMRDAESARQLPPELDLTPAQRTLAQRWARIDGSTGAYVSALALIQQNSRFI
AKDVNQALPGDLLFFDQGDDQHLMIWMDRYIAYHTGTVTRTDAGLRAVPVSELMQWKDSRWQPQGGNPNFIGVFRLAFLT
R

Specific function: Unknown

COG id: COG3234

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To P.aeruginosa PA4490 and T.maritima TM0986 [H]

Homologues:

Organism=Escherichia coli, GI87082068, Length=208, Percent_Identity=60.0961538461538, Blast_Score=276, Evalue=1e-75,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009558 [H]

Pfam domain/function: PF06672 DUF1175 [H]

EC number: NA

Molecular weight: Translated: 26625; Mature: 26625

Theoretical pI: Translated: 11.37; Mature: 11.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPRALAHVPAAAPRRRWLAAAGAGLLAQAFAPGVRALSGWADAAAAGPGALTPEQSGVF
CCCCCCCCCCCCCHHHHHHHHHCHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCHH
RAWFVRIVNEQLRQGPTPRWTHRDCAGLVRFAAAEALRPHDVRWLRANGMRDAESARQLP
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHCCC
PELDLTPAQRTLAQRWARIDGSTGAYVSALALIQQNSRFIAKDVNQALPGDLLFFDQGDD
CCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEECCCC
QHLMIWMDRYIAYHTGTVTRTDAGLRAVPVSELMQWKDSRWQPQGGNPNFIGVFRLAFLT
CEEEEEEHHHHHHHCCCEEECCCCCEECCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHC
R
C
>Mature Secondary Structure
MKPRALAHVPAAAPRRRWLAAAGAGLLAQAFAPGVRALSGWADAAAAGPGALTPEQSGVF
CCCCCCCCCCCCCHHHHHHHHHCHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCHH
RAWFVRIVNEQLRQGPTPRWTHRDCAGLVRFAAAEALRPHDVRWLRANGMRDAESARQLP
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHCCC
PELDLTPAQRTLAQRWARIDGSTGAYVSALALIQQNSRFIAKDVNQALPGDLLFFDQGDD
CCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEECCCC
QHLMIWMDRYIAYHTGTVTRTDAGLRAVPVSELMQWKDSRWQPQGGNPNFIGVFRLAFLT
CEEEEEEHHHHHHHCCCEEECCCCCEECCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHC
R
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]